FFCP PHASE1:Hg19::chr11:46342403..46342437,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C882|description=CAGE_peak_at_chr11:46342403..46342437,+|id=chr11:46342403..46342437,+|ontology_enrichment_celltype=CL:0000055!4.43e-33!180;CL:0000057!4.62e-21!75;CL:0000680!5.18e-13!57;CL:0000056!5.18e-13!57;CL:0000355!5.18e-13!57;CL:0000183!1.18e-12!59;CL:0000187!1.39e-12!54;CL:0000393!2.81e-11!60;CL:0000211!2.81e-11!60;CL:0000192!3.10e-10!42;CL:0000514!3.10e-10!42;CL:0002620!5.95e-10!23|ontology_enrichment_celltype_v019=CL:0000134;2.18e-10;55!CL:0002620;8.09e-10;23!CL:0000048;1.49e-09;58!CL:0000723;1.86e-09;61!CL:0000057;8.07e-09;73!CL:0000187;9.71e-09;55!CL:0000192;1.02e-08;43!CL:0002320;2.25e-08;188!CL:0002334;1.00e-07;12!CL:0000034;5.68e-07;69!CL:0000393;6.84e-07;61!CL:0000211;6.84e-07;61|ontology_enrichment_celltype_v019_2=CL:0000057,4.29e-23,76;CL:0000680,4.14e-15,58;CL:0000056,4.14e-15,58;CL:0000355,4.14e-15,58;CL:0000187,1.44e-14,55;CL:0000048,2.73e-12,427;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000192,1.85e-11,43;CL:0000514,1.85e-11,43;CL:0000723,2.01e-11,433;CL:0000034,2.50e-10,441;CL:0002620,6.18e-10,23;CL:0002334,1.05e-07,12;CL:0000222,1.08e-07,121|ontology_enrichment_development_v019=CL:0000355;7.09e-09;58!CL:0000514;1.02e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!5.85e-15!83;UBERON:0002329!5.85e-15!83;UBERON:0003077!5.85e-15!83;UBERON:0003059!5.85e-15!83;UBERON:0007282!5.85e-15!83;UBERON:0009618!5.85e-15!83;UBERON:0007285!5.85e-15!83;UBERON:0004290!3.26e-13!70;UBERON:0002385!4.71e-13!63;UBERON:0001015!4.71e-13!63;UBERON:0000383!4.71e-13!63;UBERON:0005256!5.19e-13!143;UBERON:0001134!5.56e-13!61;UBERON:0002036!5.56e-13!61;UBERON:0003082!5.56e-13!61;UBERON:0000486!1.54e-11!82;UBERON:0000475!4.94e-10!365;UBERON:0002100!2.67e-08!216;UBERON:0003102!1.13e-07!95;UBERON:0002199!3.72e-07!45;UBERON:0002416!3.72e-07!45;UBERON:0000481!7.35e-07!347|ontology_enrichment_uberon_v019=UBERON:0002384;5.02e-09;198!UBERON:0002204;7.77e-07;70!UBERON:0002385;8.43e-07;31!UBERON:0001015;8.43e-07;31!UBERON:0000383;8.43e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.64e-15,62;UBERON:0002036,8.64e-15,62;UBERON:0003082,8.64e-15,62;UBERON:0002385,2.01e-14,64;UBERON:0001015,2.01e-14,64;UBERON:0000383,2.01e-14,64;UBERON:0007524,4.50e-14,73;UBERON:0002329,6.89e-14,71;UBERON:0003059,6.89e-14,71;UBERON:0007282,6.89e-14,71;UBERON:0004290,6.89e-14,71;UBERON:0009618,6.89e-14,71;UBERON:0007503,1.86e-13,78;UBERON:0003077,1.88e-13,72;UBERON:0007285,1.88e-13,72;UBERON:0005256,6.17e-12,122;UBERON:0000486,1.20e-11,83;UBERON:0003104,3.20e-11,160;UBERON:0009142,3.20e-11,160;UBERON:0002199,4.11e-08,46;UBERON:0002416,4.11e-08,46;UBERON:0002097,5.37e-07,41;UBERON:0003102,8.14e-07,99|phase1_expression=3.08853244759946,6.42301571672949,6.20199378022273,3.00219895059391,4.46961094427288,2.61701557230111,2.53299878168311,3.15859936713415,0.783556884599516,2.94880723801811,0.697801167972428,3.05817920982241,1.84636884759917,2.47532705920093,2.31978163009541,4.70627602516243,5.42425075221579,6.57279081348636,6.8310591830671,0.861847406537515,2.04000691244253,1.88072832886853,0.572471974262113,1.36874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.68280343881454,2.04580098949649,10.4817354191524,2.50668955317945,8.98048417557107,0.795285947051099,1.94653948121054,0.661743720148475,0.443458794925128,0.351339142772504,0.458426764241994,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,4.68532893158945,2.1185468930115,5.16305917347865,8.86670955495893,1.12135520028461,5.33744978648525,6.66002380726332,0,0.67355336034844,0.653847612453835,1.05950199351452,4.60940739583999,3.74914290934075,1.5608003841516,0,5.38015249986484,0.939475989150119,0.809364721840658,0.98315564691574,1.42907919878425,2.08818339430006,2.6864703105699,1.18800285728205,12.1160795346493,4.55080680969013,5.74894513452991,2.35670559535693,1.62654075833553,0.554128230968366,3.07284334616587,5.82326812018137,3.90618953157152,3.06266894532057,12.7366641339092,13.6676728843883,9.32500365102072,7.80236849819446,6.38925681278321,5.15281080091258,16.0060496445167,11.8143432568886,9.06164147999147,5.55354303337052,8.46859067509154,11.4768700341356,9.58525899794859,6.85114267947954,8.81715080014536,0,0,0,0.731842236777572,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0,0,15.4377825166292,1.38134921352481,7.89425477654364,5.0531563716871,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0,0.134831308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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_at_chr11:46342403..46342437,+ | |||
|id=chr11:46342403..46342437,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.43e-33!180;CL:0000057!4.62e-21!75;CL:0000680!5.18e-13!57;CL:0000056!5.18e-13!57;CL:0000355!5.18e-13!57;CL:0000183!1.18e-12!59;CL:0000187!1.39e-12!54;CL:0000393!2.81e-11!60;CL:0000211!2.81e-11!60;CL:0000192!3.10e-10!42;CL:0000514!3.10e-10!42;CL:0002620!5.95e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.18e-10;55!CL:0002620;8.09e-10;23!CL:0000048;1.49e-09;58!CL:0000723;1.86e-09;61!CL:0000057;8.07e-09;73!CL:0000187;9.71e-09;55!CL:0000192;1.02e-08;43!CL:0002320;2.25e-08;188!CL:0002334;1.00e-07;12!CL:0000034;5.68e-07;69!CL:0000393;6.84e-07;61!CL:0000211;6.84e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.29e-23,76;CL:0000680,4.14e-15,58;CL:0000056,4.14e-15,58;CL:0000355,4.14e-15,58;CL:0000187,1.44e-14,55;CL:0000048,2.73e-12,427;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000192,1.85e-11,43;CL:0000514,1.85e-11,43;CL:0000723,2.01e-11,433;CL:0000034,2.50e-10,441;CL:0002620,6.18e-10,23;CL:0002334,1.05e-07,12;CL:0000222,1.08e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;7.09e-09;58!CL:0000514;1.02e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.85e-15!83;UBERON:0002329!5.85e-15!83;UBERON:0003077!5.85e-15!83;UBERON:0003059!5.85e-15!83;UBERON:0007282!5.85e-15!83;UBERON:0009618!5.85e-15!83;UBERON:0007285!5.85e-15!83;UBERON:0004290!3.26e-13!70;UBERON:0002385!4.71e-13!63;UBERON:0001015!4.71e-13!63;UBERON:0000383!4.71e-13!63;UBERON:0005256!5.19e-13!143;UBERON:0001134!5.56e-13!61;UBERON:0002036!5.56e-13!61;UBERON:0003082!5.56e-13!61;UBERON:0000486!1.54e-11!82;UBERON:0000475!4.94e-10!365;UBERON:0002100!2.67e-08!216;UBERON:0003102!1.13e-07!95;UBERON:0002199!3.72e-07!45;UBERON:0002416!3.72e-07!45;UBERON:0000481!7.35e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.02e-09;198!UBERON:0002204;7.77e-07;70!UBERON:0002385;8.43e-07;31!UBERON:0001015;8.43e-07;31!UBERON:0000383;8.43e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.64e-15,62;UBERON:0002036,8.64e-15,62;UBERON:0003082,8.64e-15,62;UBERON:0002385,2.01e-14,64;UBERON:0001015,2.01e-14,64;UBERON:0000383,2.01e-14,64;UBERON:0007524,4.50e-14,73;UBERON:0002329,6.89e-14,71;UBERON:0003059,6.89e-14,71;UBERON:0007282,6.89e-14,71;UBERON:0004290,6.89e-14,71;UBERON:0009618,6.89e-14,71;UBERON:0007503,1.86e-13,78;UBERON:0003077,1.88e-13,72;UBERON:0007285,1.88e-13,72;UBERON:0005256,6.17e-12,122;UBERON:0000486,1.20e-11,83;UBERON:0003104,3.20e-11,160;UBERON:0009142,3.20e-11,160;UBERON:0002199,4.11e-08,46;UBERON:0002416,4.11e-08,46;UBERON:0002097,5.37e-07,41;UBERON:0003102,8.14e-07,99 | |||
|phase1_expression=3.08853244759946,6.42301571672949,6.20199378022273,3.00219895059391,4.46961094427288,2.61701557230111,2.53299878168311,3.15859936713415,0.783556884599516,2.94880723801811,0.697801167972428,3.05817920982241,1.84636884759917,2.47532705920093,2.31978163009541,4.70627602516243,5.42425075221579,6.57279081348636,6.8310591830671,0.861847406537515,2.04000691244253,1.88072832886853,0.572471974262113,1.36874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.68280343881454,2.04580098949649,10.4817354191524,2.50668955317945,8.98048417557107,0.795285947051099,1.94653948121054,0.661743720148475,0.443458794925128,0.351339142772504,0.458426764241994,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,4.68532893158945,2.1185468930115,5.16305917347865,8.86670955495893,1.12135520028461,5.33744978648525,6.66002380726332,0,0.67355336034844,0.653847612453835,1.05950199351452,4.60940739583999,3.74914290934075,1.5608003841516,0,5.38015249986484,0.939475989150119,0.809364721840658,0.98315564691574,1.42907919878425,2.08818339430006,2.6864703105699,1.18800285728205,12.1160795346493,4.55080680969013,5.74894513452991,2.35670559535693,1.62654075833553,0.554128230968366,3.07284334616587,5.82326812018137,3.90618953157152,3.06266894532057,12.7366641339092,13.6676728843883,9.32500365102072,7.80236849819446,6.38925681278321,5.15281080091258,16.0060496445167,11.8143432568886,9.06164147999147,5.55354303337052,8.46859067509154,11.4768700341356,9.58525899794859,6.85114267947954,8.81715080014536,0,0,0,0.731842236777572,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0,0,15.4377825166292,1.38134921352481,7.89425477654364,5.0531563716871,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,1.40241773803446,2.4694440679884,5.88034845542168,0,0,0,0,0.737930631258681,3.94605963686609,0.109750285408626,0,0,0.0925884451585296,2.6064664424826,1.03993478527958,0,3.36198174427723,1.76113041353732,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.992425680696705,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.448524337381443,0.87192013766656,1.7601188597028,4.39523833576444,7.15312891703765,6.762422020448,11.4353390131494,5.2003718455683,7.20180647933998,0,4.26275486425759,20.5888310867732,24.9605938480064,5.76268235746538,4.56030658011229,5.68627117988073,0.791951872933429,0.602878754119172,0.871533458600294,1.99945982364114,0,0,0,15.3359907514613,6.89171615004683,0,2.17171960001369,1.84928690295345,1.07436577943937,0,0,0,0,1.52456774533478,1.30139853857622,0,0.335032530668698,0,0,0,0,2.94459580125936,6.00204625271613,1.89885516589815,23.0847656299196,27.8349222523572,18.7665873890382,13.7055455541474,1.20378439891088,2.27407504055985,1.03473071292505,23.9121215472757,1.29058417979192,7.03757277191471,2.74121620447837,3.43143423810856,0,0,0,0.606255142892519,8.32177197552485,6.04780586659361,4.46594054073798,4.45039722535381,8.98112302185835,6.27881831352935,4.60536524160033,14.4768529029247,1.48418066444991,9.56100101576464,4.79416658345443,6.15953670103569,3.63478100428535,3.02146983995894,1.45031339509947,0.802025881213139,0.184161977871793,9.64441364582697,16.9344786246247,11.5389485164293,0.451199612907412,0.231046011313244,0,0,0.844413031143006,0,0,1.94324324491925,4.62681758070868,1.08378575017541,1.00337954770971,0,0,0,0,0,1.28225062558195,2.29610251989794,0.650756789328606,0.103041011647722,11.995599891203,11.5513299888823,1.14853107599234,0,12.8547143875328,3.38347514022427,1.07834031980251,1.38153307253517,2.34322173223702,3.97454906012612,3.19036726611303,1.78975917573812,9.17029967161395,0,0,0,0.2023155617111,13.4805209296213,23.2961136654674,0,3.08033580176089,1.59691809095107,0,1.29726953372744,0,0.744316738719335,0.949138274156178,3.43134349062885,3.58256907835867,13.6940476170855,0.318203247925937,3.13979456079692,3.95719406683292,5.21620356498504,3.53437207037059,1.01091240786658,3.17020642346017,1.26377536871694,5.36397112998549,6.09283724078211,2.11300293513511,11.8754922924948,20.9280039291495,1.13008116620243,1.10273068709225,2.65375590096488,1.75380354101505,4.05142873986681,7.87073702455959,0.811641507850816,2.478587984798,2.25356482025793,11.3294968241201,5.40369725572166,1.07001315444375,3.54761064070598,6.96655196482292,15.1475650761555,2.27683904259429,2.44954304171488,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0.63337622438398,1.19548792950642,0.276283915531148,0,1.84083628503879,0.7385088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| |||
|short_description=p@chr11:46342403..46342437,+ | |||
}} |
Revision as of 17:53, 10 September 2013
Short description: | p@chr11:46342403..46342437, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:46342403..46342437, + |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.29e-23 | 76 |
muscle precursor cell | 4.14e-15 | 58 |
myoblast | 4.14e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.14e-15 | 58 |
muscle cell | 1.44e-14 | 55 |
multi fate stem cell | 2.73e-12 | 427 |
electrically responsive cell | 1.21e-11 | 61 |
electrically active cell | 1.21e-11 | 61 |
smooth muscle cell | 1.85e-11 | 43 |
smooth muscle myoblast | 1.85e-11 | 43 |
somatic stem cell | 2.01e-11 | 433 |
stem cell | 2.50e-10 | 441 |
skin fibroblast | 6.18e-10 | 23 |
preadipocyte | 1.05e-07 | 12 |
mesodermal cell | 1.08e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.64e-15 | 62 |
striated muscle tissue | 8.64e-15 | 62 |
myotome | 8.64e-15 | 62 |
muscle tissue | 2.01e-14 | 64 |
musculature | 2.01e-14 | 64 |
musculature of body | 2.01e-14 | 64 |
dense mesenchyme tissue | 4.50e-14 | 73 |
somite | 6.89e-14 | 71 |
presomitic mesoderm | 6.89e-14 | 71 |
presumptive segmental plate | 6.89e-14 | 71 |
dermomyotome | 6.89e-14 | 71 |
trunk paraxial mesoderm | 6.89e-14 | 71 |
epithelial vesicle | 1.86e-13 | 78 |
paraxial mesoderm | 1.88e-13 | 72 |
presumptive paraxial mesoderm | 1.88e-13 | 72 |
trunk mesenchyme | 6.17e-12 | 122 |
multilaminar epithelium | 1.20e-11 | 83 |
mesenchyme | 3.20e-11 | 160 |
entire embryonic mesenchyme | 3.20e-11 | 160 |
integument | 4.11e-08 | 46 |
integumental system | 4.11e-08 | 46 |
skin of body | 5.37e-07 | 41 |
surface structure | 8.14e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.