FFCP PHASE1:Hg19::chr12:13025257..13025289,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:13025257..13025289,+|id=chr12:13025257..13025289,+|ontology_enrichment_celltype=CL:0000066!5.94e-30!254;CL:0000220!1.30e-19!246;CL:0002321!1.60e-19!248;CL:0000548!6.70e-18!679;CL:0000004!6.70e-18!679;CL:0000255!6.70e-18!679;CL:0000012!1.97e-17!682;CL:0000222!1.46e-15!119;CL:0000003!1.20e-11!722;CL:0000076!9.42e-10!62;CL:0000077!5.59e-09!19;CL:0000192!2.44e-08!42;CL:0000514!2.44e-08!42;CL:0000055!1.14e-07!180;CL:0000680!4.21e-07!57;CL:0000056!4.21e-07!57;CL:0000355!4.21e-07!57;CL:0000213!4.44e-07!57;CL:0000215!4.44e-07!57;CL:0000063!4.70e-07!578;CL:0000144!7.18e-07!625|ontology_enrichment_celltype_v019=CL:0000077;4.90e-15;19!CL:0000149;9.37e-09;4!CL:0002586;5.41e-07;3|ontology_enrichment_celltype_v019_2=CL:0000077,5.34e-15,19;CL:0000066,9.30e-13,253;CL:0000222,2.48e-12,121;CL:0000149,5.78e-09,4;CL:0000213,1.22e-08,58;CL:0000215,1.22e-08,58;CL:0002321,2.93e-08,250;CL:0002586,3.45e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.74e-11!106;DOID:0050687!4.09e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.24e-12!238;UBERON:0009142!1.24e-12!238;UBERON:0000481!1.39e-11!347;UBERON:0005256!4.69e-11!143;UBERON:0002100!6.28e-11!216;UBERON:0000490!1.46e-09!138;UBERON:0000914!8.24e-09!83;UBERON:0002329!8.24e-09!83;UBERON:0003077!8.24e-09!83;UBERON:0003059!8.24e-09!83;UBERON:0007282!8.24e-09!83;UBERON:0009618!8.24e-09!83;UBERON:0007285!8.24e-09!83;UBERON:0004119!1.80e-08!169;UBERON:0000925!1.80e-08!169;UBERON:0006595!1.80e-08!169;UBERON:0000119!2.52e-08!312;UBERON:0000486!2.99e-08!82;UBERON:0007625!4.74e-08!11;UBERON:0000483!1.57e-07!309;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0002049!3.57e-07!79;UBERON:0007798!3.57e-07!79;UBERON:0000475!5.75e-07!365;UBERON:0006554!9.70e-07!44|ontology_enrichment_uberon_v019=UBERON:0007625;1.62e-08;11!UBERON:0001781;5.41e-07;3!UBERON:0001782;5.41e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.22e-08,11;UBERON:0001782,3.45e-07,3;UBERON:0005424,3.45e-07,3;UBERON:0001473,8.93e-07,8;UBERON:0004536,8.93e-07,8;UBERON:0006558,8.93e-07,8|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.96587149201207,2.09340350391728,0,0,0.37129905888014,1.65698687863958,2.01697543935533,0,0,0,1.23121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.790513071238134,0,0.728590576585084,0,0,0,0,0,0,0,0.993812036833525,0,0,0,0.838998872419812,0.275118041940067,1.04497483268405,4.13466814670926,10.3172216179146,1.67360306382335,0.402829317109147,0,0,0,2.43042584364528,0.714397826272638,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.302714855289863,0,0.468642863667593,0.312160076830321,0,0.298897361103602,0.23486899728753,0,0.140450806702248,1.22492502752936,0.859840221182376,0.103325781175765,0,0,4.55080680969013,5.03032699271367,0.841680569770331,0.375355559615893,3.60183350129438,0.438977620880838,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.710019185033229,0.403008392910561,0.508681776931463,1.15956511897978,0.272746120590835,1.43402297694502,0.121973706129595,0,0.116193942869518,0,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,0,0.709840800239063,0.842923450390509,0.241011029883482,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.784885860501384,0,0,0,0,0,0,0,0,0,0.491953754172454,4.80389868835872,0,0,0.201057944823262,0,0.325808305310325,0,5.77325368101093,0.115930404975077,1.29149563659404,0,0,0,0.790204397959275,0,0,0,0,1.87467667973554,0.671928512795438,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.308482478109971,2.40274446275134,0.285826432630578,3.7003257833969,0.43596006883328,2.56684000373325,0.775630294546667,0,0,1.06375246633948,0,1.02882949704857,1.41849132023278,0.532844358032199,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0.791951872933429,1.20575750823834,5.22920075160176,1.29964888536674,0,0,0,0.718874566474748,0,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.535286966391485,0,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0,0.868836144680828,0.19580115746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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13025257..13025289,+ | |||
|id=chr12:13025257..13025289,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.94e-30!254;CL:0000220!1.30e-19!246;CL:0002321!1.60e-19!248;CL:0000548!6.70e-18!679;CL:0000004!6.70e-18!679;CL:0000255!6.70e-18!679;CL:0000012!1.97e-17!682;CL:0000222!1.46e-15!119;CL:0000003!1.20e-11!722;CL:0000076!9.42e-10!62;CL:0000077!5.59e-09!19;CL:0000192!2.44e-08!42;CL:0000514!2.44e-08!42;CL:0000055!1.14e-07!180;CL:0000680!4.21e-07!57;CL:0000056!4.21e-07!57;CL:0000355!4.21e-07!57;CL:0000213!4.44e-07!57;CL:0000215!4.44e-07!57;CL:0000063!4.70e-07!578;CL:0000144!7.18e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.90e-15;19!CL:0000149;9.37e-09;4!CL:0002586;5.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.34e-15,19;CL:0000066,9.30e-13,253;CL:0000222,2.48e-12,121;CL:0000149,5.78e-09,4;CL:0000213,1.22e-08,58;CL:0000215,1.22e-08,58;CL:0002321,2.93e-08,250;CL:0002586,3.45e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.74e-11!106;DOID:0050687!4.09e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.24e-12!238;UBERON:0009142!1.24e-12!238;UBERON:0000481!1.39e-11!347;UBERON:0005256!4.69e-11!143;UBERON:0002100!6.28e-11!216;UBERON:0000490!1.46e-09!138;UBERON:0000914!8.24e-09!83;UBERON:0002329!8.24e-09!83;UBERON:0003077!8.24e-09!83;UBERON:0003059!8.24e-09!83;UBERON:0007282!8.24e-09!83;UBERON:0009618!8.24e-09!83;UBERON:0007285!8.24e-09!83;UBERON:0004119!1.80e-08!169;UBERON:0000925!1.80e-08!169;UBERON:0006595!1.80e-08!169;UBERON:0000119!2.52e-08!312;UBERON:0000486!2.99e-08!82;UBERON:0007625!4.74e-08!11;UBERON:0000483!1.57e-07!309;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0002049!3.57e-07!79;UBERON:0007798!3.57e-07!79;UBERON:0000475!5.75e-07!365;UBERON:0006554!9.70e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.62e-08;11!UBERON:0001781;5.41e-07;3!UBERON:0001782;5.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.22e-08,11;UBERON:0001782,3.45e-07,3;UBERON:0005424,3.45e-07,3;UBERON:0001473,8.93e-07,8;UBERON:0004536,8.93e-07,8;UBERON:0006558,8.93e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.96587149201207,2.09340350391728,0,0,0.37129905888014,1.65698687863958,2.01697543935533,0,0,0,1.23121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.790513071238134,0,0.728590576585084,0,0,0,0,0,0,0,0.993812036833525,0,0,0,0.838998872419812,0.275118041940067,1.04497483268405,4.13466814670926,10.3172216179146,1.67360306382335,0.402829317109147,0,0,0,2.43042584364528,0.714397826272638,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.302714855289863,0,0.468642863667593,0.312160076830321,0,0.298897361103602,0.23486899728753,0,0.140450806702248,1.22492502752936,0.859840221182376,0.103325781175765,0,0,4.55080680969013,5.03032699271367,0.841680569770331,0.375355559615893,3.60183350129438,0.438977620880838,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.710019185033229,0.403008392910561,0.508681776931463,1.15956511897978,0.272746120590835,1.43402297694502,0.121973706129595,0,0.116193942869518,0,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,0,0.709840800239063,0.842923450390509,0.241011029883482,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.784885860501384,0,0,0,0,0,0,0,0,0,0.491953754172454,4.80389868835872,0,0,0.201057944823262,0,0.325808305310325,0,5.77325368101093,0.115930404975077,1.29149563659404,0,0,0,0.790204397959275,0,0,0,0,1.87467667973554,0.671928512795438,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.308482478109971,2.40274446275134,0.285826432630578,3.7003257833969,0.43596006883328,2.56684000373325,0.775630294546667,0,0,1.06375246633948,0,1.02882949704857,1.41849132023278,0.532844358032199,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0.791951872933429,1.20575750823834,5.22920075160176,1.29964888536674,0,0,0,0.718874566474748,0,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.535286966391485,0,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0,0.868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0.246381468041427,0,0.232420756919918,0.604297247958111,1.60405176242628,0.460404944679482,0.574072240823034,1.0925470080403,0.393373244878272,0.451199612907412,1.5403067420883,0.784349769176855,1.46139224653261,0.527758144464379,0,4.08224892663638,0.647747748306418,0,1.35473218771926,0,0.764628819135115,4.15538004464362,0.895499018888713,0,0,3.59030175162945,7.54433685109323,1.95227036798582,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.340906509664404,0,0,0.576570202095319,0.893288987462089,0,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0.74129687641568,0,0.372158369359667,2.21465597303108,0.762520775695299,2.04718233049067,0,0,1.56989728039846,2.51821440616641,0.54907405947211,1.41374882814824,1.01091240786658,3.17020642346017,0.421258456238981,0.975267478179181,0.243713489631284,2.11300293513511,0.409499734223957,1.41405431953713,0,0,2.65375590096488,0.876901770507525,2.89387767133344,0,3.24656603140326,2.16876448669825,0,0.286822704408103,0.294747123039363,0.7133421029625,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0.769776901804097,0.670302275535787,0,0.0941438007767792,1.72202149068492,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,1.00177834520615,0,0,0,0,0,1.22722419002586,0,0.311039587661807,14.9181462904563,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.871507708151921,0.278847488557207,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.728341138602278,0,0,0,0,0,0,1.99396161812156,0,0.627865836814451,1.19472429772959,0.569219092059585,0.970722711091971,0,0.293977192243133,0.261177619741208,0,0,0.0967563312890851,0.950161122120412,0.821154570532092,0,0,0,4.24829966404928,0.596143835108969,0,0,0.561111741760736,0,0,1.00863292007874,0,0,31.6920555573929,0.124252535565433,0.235694034616795,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0,0,17.3184551891827,3.40645944732405,0.959575986597226,0,0,0,0.542999601753713,0.864221491201268,0.653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| |||
|short_description=p@chr12:13025257..13025289,+ | |||
}} |
Revision as of 21:43, 10 September 2013
Short description: | p@chr12:13025257..13025289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:13025257..13025289, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.34e-15 | 19 |
epithelial cell | 9.30e-13 | 253 |
mesodermal cell | 2.48e-12 | 121 |
visual pigment cell | 5.78e-09 | 4 |
lining cell | 1.22e-08 | 58 |
barrier cell | 1.22e-08 | 58 |
embryonic cell | 2.93e-08 | 250 |
retinal pigment epithelial cell | 3.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.22e-08 | 11 |
pigmented layer of retina | 3.45e-07 | 3 |
presumptive retinal pigmented epithelium | 3.45e-07 | 3 |
lymphatic vessel | 8.93e-07 | 8 |
lymph vasculature | 8.93e-07 | 8 |
lymphatic part of lymphoid system | 8.93e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.