FFCP PHASE1:Hg19::chr12:47474377..47474405,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:47474377..47474405,+|id=chr12:47474377..47474405,+|ontology_enrichment_celltype=CL:0000066!6.85e-13!254;CL:0000076!2.07e-07!62;CL:0002076!2.18e-07!43|ontology_enrichment_celltype_v019=CL:0002328;1.02e-09;3!CL:0000082;1.13e-08;19|ontology_enrichment_celltype_v019_2=CL:0002328,1.82e-09,3;CL:0000082,1.23e-08,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.82e-10!106;DOID:0050687!2.27e-09!143;DOID:1749!1.56e-07!14|ontology_enrichment_disease_v019=DOID:4929;1.62e-14;2!DOID:4556;5.60e-10;3!DOID:5662;6.62e-08;1|ontology_enrichment_disease_v019_2=DOID:4929,1.68e-14,2;DOID:4556,4.58e-10,3;DOID:5662,9.94e-08,1|ontology_enrichment_uberon=UBERON:0005153!1.86e-09!37;UBERON:0005157!3.91e-09!51;UBERON:0004119!8.87e-09!169;UBERON:0000925!8.87e-09!169;UBERON:0006595!8.87e-09!169;UBERON:0005911!4.07e-08!82;UBERON:0001048!8.25e-08!168;UBERON:0001007!3.79e-07!155;UBERON:0001555!3.79e-07!155;UBERON:0007026!3.79e-07!155|ontology_enrichment_uberon_v019=UBERON:0001264;2.20e-17;10!UBERON:0004815;1.02e-09;3!UBERON:0002031;1.02e-09;3!UBERON:0002075;1.47e-09;18!UBERON:0004802;1.13e-08;19!UBERON:0000115;1.13e-08;19!UBERON:0004913;6.62e-08;1!UBERON:0003703;6.62e-08;1!UBERON:0001174;6.62e-08;1!UBERON:0004914;6.62e-08;1!UBERON:0002394;1.08e-07;4!UBERON:0003928;1.08e-07;4!UBERON:0002048;1.85e-07;22!UBERON:0004807;1.85e-07;22!UBERON:0000117;1.85e-07;22!UBERON:0000171;1.85e-07;22!UBERON:0000170;1.85e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.25e-17,10;UBERON:0002075,1.48e-09,18;UBERON:0004815,1.82e-09,3;UBERON:0002031,1.82e-09,3;UBERON:0005177,8.97e-09,101;UBERON:0004802,1.23e-08,19;UBERON:0000115,1.23e-08,19;UBERON:0004913,5.40e-08,1;UBERON:0003703,5.40e-08,1;UBERON:0001174,5.40e-08,1;UBERON:0004914,5.40e-08,1;UBERON:0002048,1.99e-07,22;UBERON:0000117,1.99e-07,22;UBERON:0000171,1.99e-07,22;UBERON:0000170,1.99e-07,22;UBERON:0005597,1.99e-07,22;UBERON:0000118,1.99e-07,22|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.627713197974014,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0.545492241181669,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.603173834469785,0.648119116109707,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.806026704325635,0.290633938513962,1.15014803749563,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0.182091168006717,0,0,0.616122696835318,0,0,0.316654886678627,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.165018999841176,0.574265537996172,1.30012049207304,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.576570202095319,8.16721359965339,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.796991953004279,0,0,0.102268682502155,0,0,0.269605053441981,2.32727527078292,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,0.524759999977174,0,0.568967241427498,0.7627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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:47474377..47474405,+ | |||
|id=chr12:47474377..47474405,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.85e-13!254;CL:0000076!2.07e-07!62;CL:0002076!2.18e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.02e-09;3!CL:0000082;1.13e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.82e-09,3;CL:0000082,1.23e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.82e-10!106;DOID:0050687!2.27e-09!143;DOID:1749!1.56e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.62e-14;2!DOID:4556;5.60e-10;3!DOID:5662;6.62e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.68e-14,2;DOID:4556,4.58e-10,3;DOID:5662,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005153!1.86e-09!37;UBERON:0005157!3.91e-09!51;UBERON:0004119!8.87e-09!169;UBERON:0000925!8.87e-09!169;UBERON:0006595!8.87e-09!169;UBERON:0005911!4.07e-08!82;UBERON:0001048!8.25e-08!168;UBERON:0001007!3.79e-07!155;UBERON:0001555!3.79e-07!155;UBERON:0007026!3.79e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.20e-17;10!UBERON:0004815;1.02e-09;3!UBERON:0002031;1.02e-09;3!UBERON:0002075;1.47e-09;18!UBERON:0004802;1.13e-08;19!UBERON:0000115;1.13e-08;19!UBERON:0004913;6.62e-08;1!UBERON:0003703;6.62e-08;1!UBERON:0001174;6.62e-08;1!UBERON:0004914;6.62e-08;1!UBERON:0002394;1.08e-07;4!UBERON:0003928;1.08e-07;4!UBERON:0002048;1.85e-07;22!UBERON:0004807;1.85e-07;22!UBERON:0000117;1.85e-07;22!UBERON:0000171;1.85e-07;22!UBERON:0000170;1.85e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.25e-17,10;UBERON:0002075,1.48e-09,18;UBERON:0004815,1.82e-09,3;UBERON:0002031,1.82e-09,3;UBERON:0005177,8.97e-09,101;UBERON:0004802,1.23e-08,19;UBERON:0000115,1.23e-08,19;UBERON:0004913,5.40e-08,1;UBERON:0003703,5.40e-08,1;UBERON:0001174,5.40e-08,1;UBERON:0004914,5.40e-08,1;UBERON:0002048,1.99e-07,22;UBERON:0000117,1.99e-07,22;UBERON:0000171,1.99e-07,22;UBERON:0000170,1.99e-07,22;UBERON:0005597,1.99e-07,22;UBERON:0000118,1.99e-07,22 | |||
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| |||
|short_description=p@chr12:47474377..47474405,+ | |||
}} |
Revision as of 22:45, 10 September 2013
Short description: | p@chr12:47474377..47474405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47474377..47474405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.82e-09 | 3 |
epithelial cell of lung | 1.23e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.25e-17 | 10 |
viscus | 1.48e-09 | 18 |
lower respiratory tract epithelium | 1.82e-09 | 3 |
epithelium of bronchus | 1.82e-09 | 3 |
trunk region element | 8.97e-09 | 101 |
respiratory tract epithelium | 1.23e-08 | 19 |
lung epithelium | 1.23e-08 | 19 |
hepatopancreatic ampulla | 5.40e-08 | 1 |
extrahepatic bile duct | 5.40e-08 | 1 |
common bile duct | 5.40e-08 | 1 |
duodenal papilla | 5.40e-08 | 1 |
lung | 1.99e-07 | 22 |
respiratory tube | 1.99e-07 | 22 |
respiration organ | 1.99e-07 | 22 |
pair of lungs | 1.99e-07 | 22 |
lung primordium | 1.99e-07 | 22 |
lung bud | 1.99e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.68e-14 | 2 |
lung large cell carcinoma | 4.58e-10 | 3 |
pleomorphic carcinoma | 9.94e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.