FFCP PHASE1:Hg19::chr12:6495272..6495302,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4055|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6718|TSSclassifier=N|UniProt=|association_with_transcript=266bp_to_ENST00000444814_5end|description=CAGE_peak_6_at_LTBR_5end|id=chr12:6495272..6495302,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.71e-12!448;UBERON:0004120!2.71e-12!448;UBERON:0006603!2.71e-12!448;UBERON:0000468!1.59e-10!659;UBERON:0000467!4.03e-08!625;UBERON:0000480!6.12e-08!626;UBERON:0002100!7.45e-08!216;UBERON:0004119!1.12e-07!169;UBERON:0000925!1.12e-07!169;UBERON:0006595!1.12e-07!169;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000923!1.73e-07!604;UBERON:0005291!1.73e-07!604;UBERON:0006598!1.73e-07!604;UBERON:0002532!1.73e-07!604;UBERON:0003102!6.23e-07!95;UBERON:0001007!6.80e-07!155;UBERON:0001555!6.80e-07!155;UBERON:0007026!6.80e-07!155|ontology_enrichment_uberon_v019=UBERON:0004457;3.34e-07;9!UBERON:0000042;3.34e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.81e-08,315;UBERON:0004120,4.81e-08,315;UBERON:0006603,4.81e-08,315;UBERON:0002100,7.85e-07,199|phase1_expression=1.45342703416445,2.35510576280081,1.69145284915165,1.0007329835313,2.68176656656373,0,5.06599756336621,2.52687949370732,2.08948502559871,0.982935746006035,0,0.218441372130172,1.31883489114227,0.74259811776028,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,2.46307021663917,0,0.515151135268373,1.45398238779565,2.26725566213286,1.21292030593908,0.232429036905685,0,0.619412741790207,1.43846196161075,1.7931249457037,0.236482229888585,1.72372840368309,1.93645405075148,1.35426486594342,2.82363509313907,3.27487380069415,0.224723484445085,3.97909060082173,3.53021929783703,2.55734850319616,1.64925650093358,1.39624560335142,1.70489900213078,0,0.56738522469114,0,1.00499466102697,2.60741459210101,0.434377689410233,0,0,0,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,0.750884464207532,0.16072558669708,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,0,1.44846518960824,0.795285947051099,0.486634870302636,0,0,0.175669571386252,0.458426764241994,0.364295288292542,0,0.324547393654683,0,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,1.25849830862972,0,0.417989933073621,0,0.35576626268671,0,1.20848795132744,0,1.22031028774085,0.367663080345869,0,0.357198913136319,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,1.01304409331664,0.529636723252875,3.15520282823695,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.538842688278752,0.490385709340376,0.454072282934794,0,0.234321431833797,3.74592092196385,0,0.747243402759005,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.516628905878827,0,1.97813543422845,0,2.15585442544872,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,2.55404700141215,0.340296549480063,0.179389635688862,0.213557388818567,1.27159140695737,0.900273288253207,1.13357782162283,0.257640540045629,0.18611685633159,0,0.974370051611986,0.252433774244115,1.19664868234989,0.80823028409406,0.355009592516614,0.403008392910561,0.169560592310488,1.54608682530637,1.63647672354501,0.573609190778008,0,0,0,0.207322110030741,0,0,0,3.21620469096443,1.38134921352481,0.928735856063958,0,0.828147600278907,0.168584690078102,0.482022059766964,0.441175890929576,0.435758888184812,0.237270619111097,0.674156540800822,0.784885860501384,0,2.21446636387394,0,0.4115740113314,1.47008711385542,0,15.725235466842,8.27105869353966,0,0.614942192715568,0.171567810298526,1.20725313949488,1.1240175325762,0.502644862058154,0.277765335475589,0,1.03993478527958,0,0,0,0.577465791044295,1.38895653772983,0.380508304469197,0.790204397959275,0.858486162094873,0.492434012174795,0,0.743155811443641,0,0.335964256397719,0.567100388969546,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0.126995788584338,1.52795370223311,2.34434894420094,0,0.616964956219941,1.20137223137567,2.00078502841405,0.336393253036082,0,0,0.775630294546667,0,1.690605505112,1.06375246633948,1.04007436911366,0,1.41849132023278,0.266422179016099,0.57191197463259,1.62786481617433,0,0.325736184293735,0.710783897485092,0.791951872933429,1.20575750823834,0,0.699810938274399,2.43247561282381,2.00902836572851,2.10833939483032,1.19812427745791,2.29723871668228,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0.749007023947182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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6718 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=266bp_to_ENST00000444814_5end | |||
|description=CAGE_peak_6_at_LTBR_5end | |||
|id=chr12:6495272..6495302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.71e-12!448;UBERON:0004120!2.71e-12!448;UBERON:0006603!2.71e-12!448;UBERON:0000468!1.59e-10!659;UBERON:0000467!4.03e-08!625;UBERON:0000480!6.12e-08!626;UBERON:0002100!7.45e-08!216;UBERON:0004119!1.12e-07!169;UBERON:0000925!1.12e-07!169;UBERON:0006595!1.12e-07!169;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000923!1.73e-07!604;UBERON:0005291!1.73e-07!604;UBERON:0006598!1.73e-07!604;UBERON:0002532!1.73e-07!604;UBERON:0003102!6.23e-07!95;UBERON:0001007!6.80e-07!155;UBERON:0001555!6.80e-07!155;UBERON:0007026!6.80e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.34e-07;9!UBERON:0000042;3.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.81e-08,315;UBERON:0004120,4.81e-08,315;UBERON:0006603,4.81e-08,315;UBERON:0002100,7.85e-07,199 | |||
|phase1_expression=1.45342703416445,2.35510576280081,1.69145284915165,1.0007329835313,2.68176656656373,0,5.06599756336621,2.52687949370732,2.08948502559871,0.982935746006035,0,0.218441372130172,1.31883489114227,0.74259811776028,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,2.46307021663917,0,0.515151135268373,1.45398238779565,2.26725566213286,1.21292030593908,0.232429036905685,0,0.619412741790207,1.43846196161075,1.7931249457037,0.236482229888585,1.72372840368309,1.93645405075148,1.35426486594342,2.82363509313907,3.27487380069415,0.224723484445085,3.97909060082173,3.53021929783703,2.55734850319616,1.64925650093358,1.39624560335142,1.70489900213078,0,0.56738522469114,0,1.00499466102697,2.60741459210101,0.434377689410233,0,0,0,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,0.750884464207532,0.16072558669708,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,0,1.44846518960824,0.795285947051099,0.486634870302636,0,0,0.175669571386252,0.458426764241994,0.364295288292542,0,0.324547393654683,0,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,1.25849830862972,0,0.417989933073621,0,0.35576626268671,0,1.20848795132744,0,1.22031028774085,0.367663080345869,0,0.357198913136319,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,1.01304409331664,0.529636723252875,3.15520282823695,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.538842688278752,0.490385709340376,0.454072282934794,0,0.234321431833797,3.74592092196385,0,0.747243402759005,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.516628905878827,0,1.97813543422845,0,2.15585442544872,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,2.55404700141215,0.340296549480063,0.179389635688862,0.213557388818567,1.27159140695737,0.900273288253207,1.13357782162283,0.257640540045629,0.18611685633159,0,0.974370051611986,0.252433774244115,1.19664868234989,0.80823028409406,0.355009592516614,0.403008392910561,0.169560592310488,1.54608682530637,1.63647672354501,0.573609190778008,0,0,0,0.207322110030741,0,0,0,3.21620469096443,1.38134921352481,0.928735856063958,0,0.828147600278907,0.168584690078102,0.482022059766964,0.441175890929576,0.435758888184812,0.237270619111097,0.674156540800822,0.784885860501384,0,2.21446636387394,0,0.4115740113314,1.47008711385542,0,15.725235466842,8.27105869353966,0,0.614942192715568,0.171567810298526,1.20725313949488,1.1240175325762,0.502644862058154,0.277765335475589,0,1.03993478527958,0,0,0,0.577465791044295,1.38895653772983,0.380508304469197,0.790204397959275,0.858486162094873,0.492434012174795,0,0.743155811443641,0,0.335964256397719,0.567100388969546,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0.126995788584338,1.52795370223311,2.34434894420094,0,0.616964956219941,1.20137223137567,2.00078502841405,0.336393253036082,0,0,0.775630294546667,0,1.690605505112,1.06375246633948,1.04007436911366,0,1.41849132023278,0.266422179016099,0.57191197463259,1.62786481617433,0,0.325736184293735,0.710783897485092,0.791951872933429,1.20575750823834,0,0.699810938274399,2.43247561282381,2.00902836572851,2.10833939483032,1.19812427745791,2.29723871668228,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.981531933753119,4.00136416847742,0.542530047399471,0.415941723061614,0.535286966391485,0.788512075169673,0.468565659970853,1.50473049863859,13.6444502433591,3.10419213877515,0.664225598535437,0.184369168541703,1.73767228936166,3.32861967686659,1.71571711905428,0.206768026122887,0.431428401637234,0.106727557803444,1.81876542867756,0,0.604780586659361,1.98486246255021,0,1.96462066103151,1.15325234330131,2.55853624533352,1.12597744800525,0,0.462629081407967,0.887808626565635,0.739144404124282,0.519254429183621,0.929683027679674,2.1754700926492,2.6065841139427,2.76242966807689,0.68888668898764,0.546273504020151,2.49136388422906,0,0.231046011313244,0,1.46139224653261,0.105551628892876,2.27466768141793,1.19065593693561,0.215915916102139,3.08454505380579,0.541892875087706,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,1.854738209659,0.183138929636687,0.082509499920588,0,0.650060246036521,0,3.86682873168488,0.308097234229289,0.460511024178389,0.137836572484531,0.429680979473094,0.290033387828457,0.511359764496605,0.623224249527161,1.65284915360978,2.11409074101617,0.127612712494584,1.4162089319777,1.85938219718914,1.88887408098384,0,0.308033580176089,0.532306030317022,0,1.66791797193528,0.143124886741991,0.372158369359667,0,0.762520775695299,0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| |||
|short_description=p6@LTBR | |||
}} |
Revision as of 23:54, 10 September 2013
Short description: | p6@LTBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LTBR_5end |
Coexpression cluster: | NA |
Association with transcript: | 266bp_to_ENST00000444814_5end |
EntrezGene: | LTBR |
HGNC: | 6718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.81e-08 | 315 |
mesoderm-derived structure | 4.81e-08 | 315 |
presumptive mesoderm | 4.81e-08 | 315 |
trunk | 7.85e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.