FFCP PHASE1:Hg19::chr14:53190525..53190534,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5706|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9553|TSSclassifier=S|UniProt=|association_with_transcript=62bp_to_ENST00000557632_5end|coexpression_cluster_id=C47|description=CAGE_peak_4_at_PSMC6_5end|id=chr14:53190525..53190534,+|ontology_enrichment_celltype=CL:0000236!1.04e-41!14;CL:0000945!4.48e-30!24;CL:0000826!4.48e-30!24;CL:0000838!8.66e-20!52;CL:0000542!2.20e-19!53;CL:0000051!2.20e-19!53;CL:0000898!4.03e-13!3;CL:0000810!2.28e-10!1;CL:0000895!2.28e-10!1;CL:0002436!2.28e-10!1;CL:0002427!2.28e-10!1;CL:0002428!2.28e-10!1;CL:0002429!2.28e-10!1;CL:0002433!2.28e-10!1;CL:0002431!2.28e-10!1;CL:0002432!2.28e-10!1;CL:0002087!1.39e-07!119;CL:0000738!1.81e-07!140;CL:0002032!3.24e-07!165;CL:0000837!3.24e-07!165;CL:0002031!3.28e-07!124;CL:0000624!5.42e-07!6;CL:0000037!7.77e-07!172;CL:0000566!7.77e-07!172|ontology_enrichment_celltype_v019=CL:0000236;1.91e-120;13!CL:0000945;1.90e-65;24!CL:0000542;1.73e-25;53|ontology_enrichment_celltype_v019_2=CL:0000236,7.03e-112,14;CL:0000945,1.90e-65,24;CL:0000826,1.90e-65,24;CL:0000838,2.32e-30,52;CL:0000542,8.61e-30,53;CL:0000051,8.61e-30,53;CL:0002087,1.16e-13,115;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177|ontology_enrichment_development_v019=CL:0000051;1.73e-25;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004913!3.96e-10!1;UBERON:0003703!3.96e-10!1;UBERON:0001174!3.96e-10!1;UBERON:0004914!3.96e-10!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.64594055766984,8.00558328477199,8.10787422876364,4.00395987036012,7.47178171940828,9.25462821898807,4.77026877267682,0,0,0,0,0,0,0,0,0,0,0.977766799900771,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@PSMC6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9553 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=62bp_to_ENST00000557632_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_PSMC6_5end | |||
|id=chr14:53190525..53190534,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.04e-41!14;CL:0000945!4.48e-30!24;CL:0000826!4.48e-30!24;CL:0000838!8.66e-20!52;CL:0000542!2.20e-19!53;CL:0000051!2.20e-19!53;CL:0000898!4.03e-13!3;CL:0000810!2.28e-10!1;CL:0000895!2.28e-10!1;CL:0002436!2.28e-10!1;CL:0002427!2.28e-10!1;CL:0002428!2.28e-10!1;CL:0002429!2.28e-10!1;CL:0002433!2.28e-10!1;CL:0002431!2.28e-10!1;CL:0002432!2.28e-10!1;CL:0002087!1.39e-07!119;CL:0000738!1.81e-07!140;CL:0002032!3.24e-07!165;CL:0000837!3.24e-07!165;CL:0002031!3.28e-07!124;CL:0000624!5.42e-07!6;CL:0000037!7.77e-07!172;CL:0000566!7.77e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.91e-120;13!CL:0000945;1.90e-65;24!CL:0000542;1.73e-25;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.03e-112,14;CL:0000945,1.90e-65,24;CL:0000826,1.90e-65,24;CL:0000838,2.32e-30,52;CL:0000542,8.61e-30,53;CL:0000051,8.61e-30,53;CL:0002087,1.16e-13,115;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.73e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004913!3.96e-10!1;UBERON:0003703!3.96e-10!1;UBERON:0001174!3.96e-10!1;UBERON:0004914!3.96e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.64594055766984,8.00558328477199,8.10787422876364,4.00395987036012,7.47178171940828,9.25462821898807,4.77026877267682,0,0,0,0,0,0,0,0,0,0,0.977766799900771,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@PSMC6 | |||
}} |
Revision as of 04:46, 11 September 2013
Short description: | p4@PSMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PSMC6_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 62bp_to_ENST00000557632_5end |
EntrezGene: | PSMC6 |
HGNC: | 9553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.03e-112 | 14 |
lymphocyte of B lineage | 1.90e-65 | 24 |
pro-B cell | 1.90e-65 | 24 |
lymphoid lineage restricted progenitor cell | 2.32e-30 | 52 |
lymphocyte | 8.61e-30 | 53 |
common lymphoid progenitor | 8.61e-30 | 53 |
nongranular leukocyte | 1.16e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.