FFCP PHASE1:Hg19::chr15:34629745..34629774,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9990|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10914|TSSclassifier=W|UniProt=|association_with_transcript=168bp_to_ENST00000559484_5end|coexpression_cluster_id=C2|description=CAGE_peak_13_at_SLC12A6_5end|id=chr15:34629745..34629774,-|ontology_enrichment_celltype=CL:0002057!1.31e-27!42;CL:0000860!6.37e-26!45;CL:0000738!1.59e-22!140;CL:0002087!6.48e-22!119;CL:0000766!2.05e-21!76;CL:0000037!3.56e-21!172;CL:0000566!3.56e-21!172;CL:0002032!5.37e-21!165;CL:0000837!5.37e-21!165;CL:0002031!1.47e-19!124;CL:0000988!3.76e-19!182;CL:0002194!5.23e-18!63;CL:0000576!5.23e-18!63;CL:0000040!5.23e-18!63;CL:0000559!5.23e-18!63;CL:0000839!7.76e-18!70;CL:0002009!5.38e-17!65;CL:0000763!9.31e-17!112;CL:0000049!9.31e-17!112;CL:0000557!2.08e-16!71|ontology_enrichment_celltype_v019=CL:0000860;2.67e-21;33!CL:0002057;2.67e-21;33!CL:0000775;2.77e-18;3!CL:0000094;3.62e-18;8!CL:0000473;2.93e-14;39!CL:0000234;2.93e-14;39!CL:0000081;3.85e-13;11!CL:0000766;4.16e-13;69!CL:0000771;1.08e-12;2!CL:0000576;7.77e-11;48!CL:0000763;1.23e-07;100|ontology_enrichment_celltype_v019_2=CL:0000766,1.89e-23,72;CL:0000860,1.76e-19,42;CL:0002057,1.76e-19,42;CL:0000775,2.80e-18,3;CL:0000094,3.66e-18,8;CL:0000763,7.64e-18,108;CL:0000049,7.64e-18,108;CL:0000473,1.04e-16,48;CL:0000234,1.04e-16,48;CL:0000738,9.51e-15,136;CL:0002032,2.08e-14,161;CL:0000837,2.08e-14,161;CL:0000037,1.34e-13,168;CL:0000839,3.68e-13,66;CL:0000081,3.87e-13,11;CL:0000557,6.35e-13,67;CL:0002194,7.81e-13,59;CL:0000576,7.81e-13,59;CL:0000040,7.81e-13,59;CL:0000559,7.81e-13,59;CL:0000771,1.08e-12,2;CL:0000988,1.19e-12,177;CL:0002009,2.47e-12,61;CL:0002031,2.41e-09,120;CL:0002087,1.34e-08,115;CL:0002379,8.27e-07,1|ontology_enrichment_development_v019=CL:0002057;1.38e-16;42!CL:0000049;2.76e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:3620,8.27e-07,1;DOID:3565,8.27e-07,1;DOID:3347,9.25e-07,1|ontology_enrichment_uberon=UBERON:0002390!1.54e-20!102;UBERON:0003061!1.54e-20!102;UBERON:0002193!3.79e-19!112;UBERON:0002371!9.66e-15!80;UBERON:0001474!1.26e-13!86;UBERON:0004765!1.16e-10!101;UBERON:0001434!1.16e-10!101;UBERON:0002405!6.56e-10!115;UBERON:0002020!1.45e-08!34;UBERON:0003528!1.45e-08!34;UBERON:0001893!2.67e-08!34;UBERON:0002791!6.85e-08!33;UBERON:0001869!1.07e-07!32;UBERON:0001049!1.13e-07!57;UBERON:0005068!1.13e-07!57;UBERON:0006241!1.13e-07!57;UBERON:0007135!1.13e-07!57;UBERON:0007023!3.05e-07!115;UBERON:0002780!4.20e-07!41;UBERON:0001890!4.20e-07!41;UBERON:0006240!4.20e-07!41;UBERON:0003080!8.84e-07!42;UBERON:0000178!9.83e-07!15;UBERON:0000179!9.83e-07!15;UBERON:0000463!9.83e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.93e-12,98;UBERON:0003061,1.93e-12,98;UBERON:0001474,1.06e-11,82;UBERON:0002371,4.49e-11,76;UBERON:0002193,5.76e-11,108;UBERON:0004765,2.13e-10,90;UBERON:0001434,4.61e-09,100;UBERON:0002405,1.48e-08,93|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0.447830948479849,0,0,1.45398238779565,1.88937971844405,1.4555043671269,0.464858073811369,1.6446715520873,0.619412741790207,0.575384784644301,1.2808035326455,0.47296445977717,0,1.93645405075148,2.70852973188684,0.752969358170419,1.91034305040492,0.898893937780338,0.612167784741805,0.641858054152187,0.639337125799041,0.989553900560148,1.39624560335142,0.852449501065388,0.290209238628584,1.70215567407342,0,0.502497330513487,0.521482918420201,1.3031330682307,0.605399502633369,0.736555271975129,2.21523671208619,0.422510572623884,0.212604299965044,0,0.112328631146495,0.450530678524519,0.64290234678832,0,0.19891667719909,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.390178042679635,0.657751618414705,0.276350017785848,0.289803085735052,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0.637130828648193,0.651083453856419,0,0,0,1.24930726552346,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,23.7204751384914,11.6334079244498,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=168bp_to_ENST00000559484_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_SLC12A6_5end | |||
|id=chr15:34629745..34629774,- | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-27!42;CL:0000860!6.37e-26!45;CL:0000738!1.59e-22!140;CL:0002087!6.48e-22!119;CL:0000766!2.05e-21!76;CL:0000037!3.56e-21!172;CL:0000566!3.56e-21!172;CL:0002032!5.37e-21!165;CL:0000837!5.37e-21!165;CL:0002031!1.47e-19!124;CL:0000988!3.76e-19!182;CL:0002194!5.23e-18!63;CL:0000576!5.23e-18!63;CL:0000040!5.23e-18!63;CL:0000559!5.23e-18!63;CL:0000839!7.76e-18!70;CL:0002009!5.38e-17!65;CL:0000763!9.31e-17!112;CL:0000049!9.31e-17!112;CL:0000557!2.08e-16!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-21;33!CL:0002057;2.67e-21;33!CL:0000775;2.77e-18;3!CL:0000094;3.62e-18;8!CL:0000473;2.93e-14;39!CL:0000234;2.93e-14;39!CL:0000081;3.85e-13;11!CL:0000766;4.16e-13;69!CL:0000771;1.08e-12;2!CL:0000576;7.77e-11;48!CL:0000763;1.23e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.89e-23,72;CL:0000860,1.76e-19,42;CL:0002057,1.76e-19,42;CL:0000775,2.80e-18,3;CL:0000094,3.66e-18,8;CL:0000763,7.64e-18,108;CL:0000049,7.64e-18,108;CL:0000473,1.04e-16,48;CL:0000234,1.04e-16,48;CL:0000738,9.51e-15,136;CL:0002032,2.08e-14,161;CL:0000837,2.08e-14,161;CL:0000037,1.34e-13,168;CL:0000839,3.68e-13,66;CL:0000081,3.87e-13,11;CL:0000557,6.35e-13,67;CL:0002194,7.81e-13,59;CL:0000576,7.81e-13,59;CL:0000040,7.81e-13,59;CL:0000559,7.81e-13,59;CL:0000771,1.08e-12,2;CL:0000988,1.19e-12,177;CL:0002009,2.47e-12,61;CL:0002031,2.41e-09,120;CL:0002087,1.34e-08,115;CL:0002379,8.27e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-16;42!CL:0000049;2.76e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.27e-07,1;DOID:3565,8.27e-07,1;DOID:3347,9.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-20!102;UBERON:0003061!1.54e-20!102;UBERON:0002193!3.79e-19!112;UBERON:0002371!9.66e-15!80;UBERON:0001474!1.26e-13!86;UBERON:0004765!1.16e-10!101;UBERON:0001434!1.16e-10!101;UBERON:0002405!6.56e-10!115;UBERON:0002020!1.45e-08!34;UBERON:0003528!1.45e-08!34;UBERON:0001893!2.67e-08!34;UBERON:0002791!6.85e-08!33;UBERON:0001869!1.07e-07!32;UBERON:0001049!1.13e-07!57;UBERON:0005068!1.13e-07!57;UBERON:0006241!1.13e-07!57;UBERON:0007135!1.13e-07!57;UBERON:0007023!3.05e-07!115;UBERON:0002780!4.20e-07!41;UBERON:0001890!4.20e-07!41;UBERON:0006240!4.20e-07!41;UBERON:0003080!8.84e-07!42;UBERON:0000178!9.83e-07!15;UBERON:0000179!9.83e-07!15;UBERON:0000463!9.83e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.93e-12,98;UBERON:0003061,1.93e-12,98;UBERON:0001474,1.06e-11,82;UBERON:0002371,4.49e-11,76;UBERON:0002193,5.76e-11,108;UBERON:0004765,2.13e-10,90;UBERON:0001434,4.61e-09,100;UBERON:0002405,1.48e-08,93 | |||
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| |||
|short_description=p13@SLC12A6 | |||
}} |
Revision as of 06:39, 11 September 2013
Short description: | p13@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 168bp_to_ENST00000559484_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.89e-23 | 72 |
classical monocyte | 1.76e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-19 | 42 |
neutrophil | 2.80e-18 | 3 |
granulocyte | 3.66e-18 | 8 |
myeloid cell | 7.64e-18 | 108 |
common myeloid progenitor | 7.64e-18 | 108 |
defensive cell | 1.04e-16 | 48 |
phagocyte | 1.04e-16 | 48 |
leukocyte | 9.51e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.08e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-14 | 161 |
hematopoietic stem cell | 1.34e-13 | 168 |
myeloid lineage restricted progenitor cell | 3.68e-13 | 66 |
blood cell | 3.87e-13 | 11 |
granulocyte monocyte progenitor cell | 6.35e-13 | 67 |
monopoietic cell | 7.81e-13 | 59 |
monocyte | 7.81e-13 | 59 |
monoblast | 7.81e-13 | 59 |
promonocyte | 7.81e-13 | 59 |
eosinophil | 1.08e-12 | 2 |
hematopoietic cell | 1.19e-12 | 177 |
macrophage dendritic cell progenitor | 2.47e-12 | 61 |
hematopoietic lineage restricted progenitor cell | 2.41e-09 | 120 |
nongranular leukocyte | 1.34e-08 | 115 |
meningothelial cell | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.93e-12 | 98 |
blood island | 1.93e-12 | 98 |
bone element | 1.06e-11 | 82 |
bone marrow | 4.49e-11 | 76 |
hemolymphoid system | 5.76e-11 | 108 |
skeletal element | 2.13e-10 | 90 |
skeletal system | 4.61e-09 | 100 |
immune system | 1.48e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.27e-07 | 1 |
meningioma | 8.27e-07 | 1 |
osteosarcoma | 9.25e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.