FFCP PHASE1:Hg19::chr15:39887886..39887897,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C142|description=CAGE_peak_at_chr15:39887886..39887897,+|id=chr15:39887886..39887897,+|ontology_enrichment_celltype=CL:0000057!7.37e-17!75;CL:0000055!1.29e-14!180;CL:0002371!1.67e-11!591;CL:0000222!2.43e-10!119;CL:0000144!3.03e-10!625;CL:0000012!1.50e-09!682;CL:0000548!1.97e-09!679;CL:0000004!1.97e-09!679;CL:0000255!1.97e-09!679;CL:0002139!3.38e-09!24;CL:0000115!4.07e-08!35;CL:0000220!5.18e-08!246;CL:0002321!9.92e-08!248;CL:0002620!1.31e-07!23;CL:0002334!2.90e-07!12;CL:0000192!4.04e-07!42;CL:0000514!4.04e-07!42;CL:0000359!6.45e-07!32|ontology_enrichment_celltype_v019=CL:0002620;1.86e-14;23!CL:0002139;2.72e-09;24!CL:0000057;2.62e-08;73!CL:0002138;1.01e-07;6!CL:0002334;1.55e-07;12!CL:0002580;2.20e-07;3!CL:0002579;5.14e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,4.31e-21,76;CL:0002620,2.18e-14,23;CL:0002139,1.75e-09,24;CL:0005020,8.43e-08,6;CL:0002138,8.43e-08,6;CL:0005022,8.43e-08,6;CL:0002334,1.36e-07,12;CL:0002580,2.19e-07,3;CL:0000115,3.02e-07,36;CL:0002579,4.55e-07,3|ontology_enrichment_development_v019=CL:0005022;1.01e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.24e-09;5!DOID:450;2.24e-09;5!DOID:66;2.24e-09;5!DOID:423;2.24e-09;5!DOID:0080000;2.24e-09;5!DOID:11722;2.24e-09;5|ontology_enrichment_disease_v019_2=DOID:17,3.29e-09,5;DOID:450,3.29e-09,5;DOID:66,3.29e-09,5;DOID:423,3.29e-09,5;DOID:0080000,3.29e-09,5;DOID:11722,3.29e-09,5|ontology_enrichment_uberon=UBERON:0000055!7.17e-16!69;UBERON:0002049!1.91e-13!79;UBERON:0007798!1.91e-13!79;UBERON:0001981!3.94e-13!60;UBERON:0007500!3.94e-13!60;UBERON:0004537!3.94e-13!60;UBERON:0006965!3.94e-13!60;UBERON:0001637!7.67e-12!42;UBERON:0003509!7.67e-12!42;UBERON:0004572!7.67e-12!42;UBERON:0004872!9.88e-12!84;UBERON:0003914!1.09e-10!118;UBERON:0001009!4.43e-10!113;UBERON:0004535!6.46e-10!110;UBERON:0004573!1.37e-09!33;UBERON:0004571!1.37e-09!33;UBERON:0000468!9.11e-09!659;UBERON:0003102!1.60e-08!95;UBERON:0002199!1.80e-08!45;UBERON:0002416!1.80e-08!45;UBERON:0002097!3.26e-08!40;UBERON:0000490!4.33e-08!138;UBERON:0002100!4.55e-08!216;UBERON:0000947!6.20e-08!21;UBERON:0010191!6.20e-08!21;UBERON:0000467!1.18e-07!625;UBERON:0000480!1.51e-07!626;UBERON:0000914!3.81e-07!83;UBERON:0002329!3.81e-07!83;UBERON:0003077!3.81e-07!83;UBERON:0003059!3.81e-07!83;UBERON:0007282!3.81e-07!83;UBERON:0009618!3.81e-07!83;UBERON:0007285!3.81e-07!83;UBERON:0005256!8.86e-07!143;UBERON:0000486!9.63e-07!82|ontology_enrichment_uberon_v019=UBERON:0003688;8.73e-12;6!UBERON:0002358;8.73e-12;6!UBERON:0003684;8.73e-12;6!UBERON:0001178;8.73e-12;6!UBERON:0002097;1.41e-11;41!UBERON:0001637;2.64e-10;42!UBERON:0003509;2.64e-10;42!UBERON:0004572;2.64e-10;42!UBERON:0002199;1.64e-09;46!UBERON:0002416;1.64e-09;46!UBERON:0000947;3.29e-09;21!UBERON:0010191;3.29e-09;21!UBERON:0004573;3.05e-08;33!UBERON:0004571;3.05e-08;33!UBERON:0004457;1.62e-07;9!UBERON:0000042;1.62e-07;9!UBERON:0000055;1.76e-07;65!UBERON:0007500;4.17e-07;56!UBERON:0001981;4.17e-07;56!UBERON:0004537;4.17e-07;56!UBERON:0001708;4.72e-07;4!UBERON:0008895;4.72e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.10e-15,41;UBERON:0002199,2.72e-13,46;UBERON:0002416,2.72e-13,46;UBERON:0000055,5.74e-13,68;UBERON:0003688,4.01e-12,6;UBERON:0002358,4.01e-12,6;UBERON:0003684,4.01e-12,6;UBERON:0001178,4.01e-12,6;UBERON:0001637,8.63e-12,42;UBERON:0003509,8.63e-12,42;UBERON:0004572,8.63e-12,42;UBERON:0002049,2.51e-10,78;UBERON:0007798,2.51e-10,78;UBERON:0007500,8.22e-10,59;UBERON:0001981,8.22e-10,59;UBERON:0004537,8.22e-10,59;UBERON:0006965,8.22e-10,59;UBERON:0003102,1.92e-09,99;UBERON:0000947,3.91e-09,21;UBERON:0010191,3.91e-09,21;UBERON:0004573,4.72e-09,33;UBERON:0004571,4.72e-09,33;UBERON:0004872,1.66e-07,83;UBERON:0001708,3.35e-07,4;UBERON:0008895,3.35e-07,4;UBERON:0004871,3.40e-07,8|phase1_expression=3.08853244759946,11.1332272423311,2.96004248601539,10.007329835313,1.78784437770915,7.85104671690332,0,0,0.522371256399677,0.737201809504527,0.697801167972428,1.09220686065086,1.05506791291381,0.123766352960047,0.331397375727916,2.01697543935533,2.41077811209591,2.19093027116212,1.46379839637152,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,1.39457422143411,0,0,1.1507695692886,0.256160706529101,0,1.03423704220986,0,0,2.25890807451126,0.818718450173537,0,1.83650335422542,0,0.639337125799041,0.989553900560148,0.398927315243264,0,2.61188314765726,0,0,2.76373531782418,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,1.00267582127178,0.869079113764942,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,1.73570250803797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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39887886..39887897,+ | |||
|id=chr15:39887886..39887897,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.37e-17!75;CL:0000055!1.29e-14!180;CL:0002371!1.67e-11!591;CL:0000222!2.43e-10!119;CL:0000144!3.03e-10!625;CL:0000012!1.50e-09!682;CL:0000548!1.97e-09!679;CL:0000004!1.97e-09!679;CL:0000255!1.97e-09!679;CL:0002139!3.38e-09!24;CL:0000115!4.07e-08!35;CL:0000220!5.18e-08!246;CL:0002321!9.92e-08!248;CL:0002620!1.31e-07!23;CL:0002334!2.90e-07!12;CL:0000192!4.04e-07!42;CL:0000514!4.04e-07!42;CL:0000359!6.45e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.86e-14;23!CL:0002139;2.72e-09;24!CL:0000057;2.62e-08;73!CL:0002138;1.01e-07;6!CL:0002334;1.55e-07;12!CL:0002580;2.20e-07;3!CL:0002579;5.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.31e-21,76;CL:0002620,2.18e-14,23;CL:0002139,1.75e-09,24;CL:0005020,8.43e-08,6;CL:0002138,8.43e-08,6;CL:0005022,8.43e-08,6;CL:0002334,1.36e-07,12;CL:0002580,2.19e-07,3;CL:0000115,3.02e-07,36;CL:0002579,4.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;1.01e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.24e-09;5!DOID:450;2.24e-09;5!DOID:66;2.24e-09;5!DOID:423;2.24e-09;5!DOID:0080000;2.24e-09;5!DOID:11722;2.24e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.29e-09,5;DOID:450,3.29e-09,5;DOID:66,3.29e-09,5;DOID:423,3.29e-09,5;DOID:0080000,3.29e-09,5;DOID:11722,3.29e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.17e-16!69;UBERON:0002049!1.91e-13!79;UBERON:0007798!1.91e-13!79;UBERON:0001981!3.94e-13!60;UBERON:0007500!3.94e-13!60;UBERON:0004537!3.94e-13!60;UBERON:0006965!3.94e-13!60;UBERON:0001637!7.67e-12!42;UBERON:0003509!7.67e-12!42;UBERON:0004572!7.67e-12!42;UBERON:0004872!9.88e-12!84;UBERON:0003914!1.09e-10!118;UBERON:0001009!4.43e-10!113;UBERON:0004535!6.46e-10!110;UBERON:0004573!1.37e-09!33;UBERON:0004571!1.37e-09!33;UBERON:0000468!9.11e-09!659;UBERON:0003102!1.60e-08!95;UBERON:0002199!1.80e-08!45;UBERON:0002416!1.80e-08!45;UBERON:0002097!3.26e-08!40;UBERON:0000490!4.33e-08!138;UBERON:0002100!4.55e-08!216;UBERON:0000947!6.20e-08!21;UBERON:0010191!6.20e-08!21;UBERON:0000467!1.18e-07!625;UBERON:0000480!1.51e-07!626;UBERON:0000914!3.81e-07!83;UBERON:0002329!3.81e-07!83;UBERON:0003077!3.81e-07!83;UBERON:0003059!3.81e-07!83;UBERON:0007282!3.81e-07!83;UBERON:0009618!3.81e-07!83;UBERON:0007285!3.81e-07!83;UBERON:0005256!8.86e-07!143;UBERON:0000486!9.63e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.73e-12;6!UBERON:0002358;8.73e-12;6!UBERON:0003684;8.73e-12;6!UBERON:0001178;8.73e-12;6!UBERON:0002097;1.41e-11;41!UBERON:0001637;2.64e-10;42!UBERON:0003509;2.64e-10;42!UBERON:0004572;2.64e-10;42!UBERON:0002199;1.64e-09;46!UBERON:0002416;1.64e-09;46!UBERON:0000947;3.29e-09;21!UBERON:0010191;3.29e-09;21!UBERON:0004573;3.05e-08;33!UBERON:0004571;3.05e-08;33!UBERON:0004457;1.62e-07;9!UBERON:0000042;1.62e-07;9!UBERON:0000055;1.76e-07;65!UBERON:0007500;4.17e-07;56!UBERON:0001981;4.17e-07;56!UBERON:0004537;4.17e-07;56!UBERON:0001708;4.72e-07;4!UBERON:0008895;4.72e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.10e-15,41;UBERON:0002199,2.72e-13,46;UBERON:0002416,2.72e-13,46;UBERON:0000055,5.74e-13,68;UBERON:0003688,4.01e-12,6;UBERON:0002358,4.01e-12,6;UBERON:0003684,4.01e-12,6;UBERON:0001178,4.01e-12,6;UBERON:0001637,8.63e-12,42;UBERON:0003509,8.63e-12,42;UBERON:0004572,8.63e-12,42;UBERON:0002049,2.51e-10,78;UBERON:0007798,2.51e-10,78;UBERON:0007500,8.22e-10,59;UBERON:0001981,8.22e-10,59;UBERON:0004537,8.22e-10,59;UBERON:0006965,8.22e-10,59;UBERON:0003102,1.92e-09,99;UBERON:0000947,3.91e-09,21;UBERON:0010191,3.91e-09,21;UBERON:0004573,4.72e-09,33;UBERON:0004571,4.72e-09,33;UBERON:0004872,1.66e-07,83;UBERON:0001708,3.35e-07,4;UBERON:0008895,3.35e-07,4;UBERON:0004871,3.40e-07,8 | |||
|phase1_expression=3.08853244759946,11.1332272423311,2.96004248601539,10.007329835313,1.78784437770915,7.85104671690332,0,0,0.522371256399677,0.737201809504527,0.697801167972428,1.09220686065086,1.05506791291381,0.123766352960047,0.331397375727916,2.01697543935533,2.41077811209591,2.19093027116212,1.46379839637152,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,1.39457422143411,0,0,1.1507695692886,0.256160706529101,0,1.03423704220986,0,0,2.25890807451126,0.818718450173537,0,1.83650335422542,0,0.639337125799041,0.989553900560148,0.398927315243264,0,2.61188314765726,0,0,2.76373531782418,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,1.00267582127178,0.869079113764942,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,1.73570250803797,1.69592382577203,0,1.10047216776027,1.25396979922086,1.29208379584664,0.35576626268671,1.67360306382335,0,3.04108842287405,0.488124115096339,0.367663080345869,1.62028389576352,0.714397826272638,0.22452937262617,0.563057402416611,0,1.89853131913626,1.28241220751285,0,0,0.436094052142534,7.9515512271251,1.13967460498122,1.32409180813219,1.14734648299525,0.709336764396714,0.560677600142307,2.1349799145941,2.22000793575444,0,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,1.18800285728205,3.70900393917835,0,0.718618141816238,0.168336113954066,0,0,0.877955241761676,1.5324389789951,1.50238058906597,0.567160915800105,6.09924761342131,3.20336083227851,1.27159140695737,1.20036438433761,2.47326070172253,3.86460810068444,2.04728541964749,3.03797398034279,1.36411807225678,2.27190396819703,2.76149695926898,1.2931684545505,3.19508633264953,1.30977727695932,1.86516651541536,0.386521706326594,1.09098448236334,0.573609190778008,0,0,0,0,0,0,1.56449532329816,5.14592750554308,0,2.78620756819187,2.16563844500876,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.603173834469785,0.370353780634118,0,0,0,0,0,2.30986316417718,6.01881166349594,3.61482889245737,0,0.858486162094873,0,0,0,1.87467667973554,2.01578553838631,1.13420077793909,1.16426079513703,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,2.39344304926383,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,2.28767947683888,5.53129865271201,2.20783381047509,1.99140405487612,0.300946099727719,0,0,0.664225598535437,0.184369168541703,1.56390506042549,0,0,0,0,0,0,0,0.604780586659361,8.43566546583841,9.05425642399569,8.70046292742528,2.69092213436972,8.18731598506726,6.4341568457443,1.48418066444991,0.771048469013278,0.887808626565635,0.164254312027618,0,0.116210378459959,0,1.20303882181971,0.0920809889358963,0.574072240823034,0.546273504020151,0.786746489756545,0,0,0,0,0,1.13733384070897,0.850468526382578,0.863663664408557,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0.574265537996172,2.60024098414608,1.6068392984416,0,0,0,0.275673144969061,0.107420244868274,0,0,0.267096106940212,0,0.768760269460425,0.893288987462089,0.2023155617111,0.464845549297286,3.46293581513704,0.6970372701606,0,1.06461206063404,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0.899362287916574,0,0,0,1.58510321173008,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0.565621727814851,0,0,1.32687795048244,1.31535265576129,0,0.655894752046633,1.62328301570163,1.8589409885985,0.563391205064483,0,0.687743287091848,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.48111056362756,0,0,0,0.43050537267123,0,0.886860307073351,1.37834040124176,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.67121139316383,0.593929361665277,2.76444631889309,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,1.86623752597084,0.988551862620595,0.179021174675609,0,0.295930216910801,0,3.33410970433911,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.683652335082007,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0.31593289814244,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.34823682632161,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0.104602846312333,0.509991088181609,0,0,0,0,0,0,0,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| |||
|short_description=p@chr15:39887886..39887897,+ | |||
}} |
Revision as of 06:51, 11 September 2013
Short description: | p@chr15:39887886..39887897, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39887886..39887897, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.31e-21 | 76 |
skin fibroblast | 2.18e-14 | 23 |
endothelial cell of vascular tree | 1.75e-09 | 24 |
lymphangioblast | 8.43e-08 | 6 |
endothelial cell of lymphatic vessel | 8.43e-08 | 6 |
vascular lymphangioblast | 8.43e-08 | 6 |
preadipocyte | 1.36e-07 | 12 |
preadipocyte of the breast | 2.19e-07 | 3 |
endothelial cell | 3.02e-07 | 36 |
omentum preadipocyte | 4.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.10e-15 | 41 |
integument | 2.72e-13 | 46 |
integumental system | 2.72e-13 | 46 |
vessel | 5.74e-13 | 68 |
omentum | 4.01e-12 | 6 |
peritoneum | 4.01e-12 | 6 |
abdominal cavity | 4.01e-12 | 6 |
visceral peritoneum | 4.01e-12 | 6 |
artery | 8.63e-12 | 42 |
arterial blood vessel | 8.63e-12 | 42 |
arterial system | 8.63e-12 | 42 |
vasculature | 2.51e-10 | 78 |
vascular system | 2.51e-10 | 78 |
epithelial tube open at both ends | 8.22e-10 | 59 |
blood vessel | 8.22e-10 | 59 |
blood vasculature | 8.22e-10 | 59 |
vascular cord | 8.22e-10 | 59 |
surface structure | 1.92e-09 | 99 |
aorta | 3.91e-09 | 21 |
aortic system | 3.91e-09 | 21 |
systemic artery | 4.72e-09 | 33 |
systemic arterial system | 4.72e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 1.66e-07 | 83 |
jaw skeleton | 3.35e-07 | 4 |
splanchnocranium | 3.35e-07 | 4 |
somatic layer of lateral plate mesoderm | 3.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.29e-09 | 5 |
myotonic disease | 3.29e-09 | 5 |
muscle tissue disease | 3.29e-09 | 5 |
myopathy | 3.29e-09 | 5 |
muscular disease | 3.29e-09 | 5 |
myotonic dystrophy | 3.29e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.