FFCP PHASE1:Hg19::chr16:75410860..75410863,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C50|description=CAGE_peak_at_chr16:75410860..75410863,+|id=chr16:75410860..75410863,+|ontology_enrichment_celltype=CL:0002150!4.30e-11!3;CL:0000861!4.30e-11!3|ontology_enrichment_celltype_v019=CL:0002541;2.05e-20;3!CL:0000349;1.67e-12;19!CL:0002537;1.69e-12;5!CL:0002535;2.77e-08;2|ontology_enrichment_celltype_v019_2=CL:0002541,2.05e-20,3;CL:0000349,1.67e-12,19;CL:0002537,1.69e-12,5;CL:0002535,2.48e-08,2|ontology_enrichment_development_v019=UBERON:0008814;1.93e-08;2!UBERON:0010056;1.93e-08;2|ontology_enrichment_disease=DOID:1749!4.69e-08!14|ontology_enrichment_disease_v019=DOID:1749;1.91e-16;14!DOID:3151;2.95e-15;1!DOID:3149;2.95e-15;1!DOID:3451;2.77e-08;2!DOID:4159;2.77e-08;2!DOID:0060122;2.77e-08;2|ontology_enrichment_disease_v019_2=DOID:1749,1.95e-16,14;DOID:3151,3.17e-15,1;DOID:3149,3.17e-15,1;DOID:3451,2.87e-08,2;DOID:4159,2.87e-08,2;DOID:0060122,2.87e-08,2|ontology_enrichment_uberon=UBERON:0000002!1.39e-08!6;UBERON:0001560!1.39e-08!6;UBERON:0005631!2.04e-08!14;UBERON:0000158!2.04e-08!14;UBERON:0003124!3.80e-08!7;UBERON:0000072!3.55e-07!46;UBERON:0000065!4.04e-07!53|ontology_enrichment_uberon_v019=UBERON:0005631;1.88e-23;10!UBERON:0000158;1.88e-23;10!UBERON:0003124;2.05e-20;3!UBERON:0000920;2.05e-20;3!UBERON:0000997;7.46e-16;1!UBERON:0005056;7.46e-16;1!UBERON:0004176;7.46e-16;1!UBERON:0000478;5.93e-10;24!UBERON:0000305;3.44e-09;7!UBERON:0006955;2.77e-08;2!UBERON:0004801;2.77e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.05e-20,3;UBERON:0005631,7.39e-17,14;UBERON:0000158,7.39e-17,14;UBERON:0000997,7.46e-16,1;UBERON:0005056,7.46e-16,1;UBERON:0000478,5.93e-10,24;UBERON:0003124,2.69e-09,7;UBERON:0000305,3.44e-09,7;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0004871,3.77e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93509238737543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,5.49112314896687,0,5.22173193568695,0,0,0,4.77931235257603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,14.3550521879364,0,18.1231823846336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,6.95746021642081,1.82824333818845,0,0,1.54810130062536,3.72755517139546,0.985385484638511,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,1.34173875039706,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0.306345576763462,0,0,0,0,0,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,3.69682131681082,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr16:75410860..75410863,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr16:75410860..75410863,+ | |||
|id=chr16:75410860..75410863,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.30e-11!3;CL:0000861!4.30e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.05e-20;3!CL:0000349;1.67e-12;19!CL:0002537;1.69e-12;5!CL:0002535;2.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.05e-20,3;CL:0000349,1.67e-12,19;CL:0002537,1.69e-12,5;CL:0002535,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.93e-08;2!UBERON:0010056;1.93e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!4.69e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.91e-16;14!DOID:3151;2.95e-15;1!DOID:3149;2.95e-15;1!DOID:3451;2.77e-08;2!DOID:4159;2.77e-08;2!DOID:0060122;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.95e-16,14;DOID:3151,3.17e-15,1;DOID:3149,3.17e-15,1;DOID:3451,2.87e-08,2;DOID:4159,2.87e-08,2;DOID:0060122,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.39e-08!6;UBERON:0001560!1.39e-08!6;UBERON:0005631!2.04e-08!14;UBERON:0000158!2.04e-08!14;UBERON:0003124!3.80e-08!7;UBERON:0000072!3.55e-07!46;UBERON:0000065!4.04e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.88e-23;10!UBERON:0000158;1.88e-23;10!UBERON:0003124;2.05e-20;3!UBERON:0000920;2.05e-20;3!UBERON:0000997;7.46e-16;1!UBERON:0005056;7.46e-16;1!UBERON:0004176;7.46e-16;1!UBERON:0000478;5.93e-10;24!UBERON:0000305;3.44e-09;7!UBERON:0006955;2.77e-08;2!UBERON:0004801;2.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.05e-20,3;UBERON:0005631,7.39e-17,14;UBERON:0000158,7.39e-17,14;UBERON:0000997,7.46e-16,1;UBERON:0005056,7.46e-16,1;UBERON:0000478,5.93e-10,24;UBERON:0003124,2.69e-09,7;UBERON:0000305,3.44e-09,7;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0004871,3.77e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93509238737543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,5.49112314896687,0,5.22173193568695,0,0,0,4.77931235257603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,14.3550521879364,0,18.1231823846336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,6.95746021642081,1.82824333818845,0,0,1.54810130062536,3.72755517139546,0.985385484638511,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,1.34173875039706,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0.306345576763462,0,0,0,0,0,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,3.69682131681082,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:75410860..75410863,+ | |||
}} |
Revision as of 11:35, 11 September 2013
Short description: | p@chr16:75410860..75410863, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:75410860..75410863, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.05e-20 | 3 |
extraembryonic cell | 1.67e-12 | 19 |
amnion mesenchymal stem cell | 1.69e-12 | 5 |
epithelial cell of cervix | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.05e-20 | 3 |
extraembryonic membrane | 7.39e-17 | 14 |
membranous layer | 7.39e-17 | 14 |
mammalian vulva | 7.46e-16 | 1 |
external female genitalia | 7.46e-16 | 1 |
extraembryonic structure | 5.93e-10 | 24 |
chorion | 2.69e-09 | 7 |
amnion | 3.44e-09 | 7 |
uterine epithelium | 2.48e-08 | 2 |
cervix epithelium | 2.48e-08 | 2 |
somatic layer of lateral plate mesoderm | 3.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.95e-16 | 14 |
skin squamous cell carcinoma | 3.17e-15 | 1 |
keratoacanthoma | 3.17e-15 | 1 |
skin carcinoma | 2.87e-08 | 2 |
skin cancer | 2.87e-08 | 2 |
integumentary system cancer | 2.87e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.