FFCP PHASE1:Hg19::chr17:17495433..17495461,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10400|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8830|TSSclassifier=W|UniProt=A8MZ66|association_with_transcript=-411bp_to_ENST00000395781_5end|description=CAGE_peak_11_at_PEMT_5end|id=chr17:17495433..17495461,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002521;5.67e-28;3!CL:0000039;2.10e-12;7!CL:0000586;2.10e-12;7!CL:0000511;2.62e-10;1!CL:0002625;2.62e-10;1!CL:0000216;2.62e-10;1!CL:0000136;7.11e-07;13|ontology_enrichment_celltype_v019_2=CL:0002521,3.27e-28,3;CL:0000039,2.23e-12,7;CL:0000586,2.23e-12,7;CL:0000511,1.73e-10,1;CL:0002625,1.73e-10,1;CL:0000216,1.73e-10,1|ontology_enrichment_development_v019=UBERON:0009117;7.73e-09;10!UBERON:0005564;7.73e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;2.62e-10;1!DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:3149;2.62e-10;1|ontology_enrichment_disease_v019_2=DOID:3371,2.08e-10,1;DOID:4549,2.08e-10,1;DOID:5861,2.08e-10,1;DOID:6496,2.08e-10,1;DOID:3151,4.75e-10,1;DOID:3149,4.75e-10,1|ontology_enrichment_uberon=UBERON:0004176!6.39e-07!22;UBERON:0000991!7.25e-07!21;UBERON:0009196!7.25e-07!21;UBERON:0009117!7.25e-07!21;UBERON:0005564!7.25e-07!21|ontology_enrichment_uberon_v019=UBERON:0002190;5.67e-28;3!UBERON:0000473;1.75e-18;8!UBERON:0002072;4.75e-17;5!UBERON:0003135;1.64e-13;11!UBERON:0001013;9.31e-11;14!UBERON:0001136;2.62e-10;1!UBERON:0001343;2.62e-10;1!UBERON:0004910;2.62e-10;1!UBERON:0004813;2.62e-10;1!UBERON:0000991;3.73e-07;21!UBERON:0003101;7.79e-07;22!UBERON:0000079;7.79e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.27e-28,3;UBERON:0000473,1.53e-18,8;UBERON:0002072,3.42e-17,5;UBERON:0003135,1.49e-13,11;UBERON:0001013,8.20e-11,14;UBERON:0001136,1.73e-10,1;UBERON:0001343,1.73e-10,1;UBERON:0004910,1.73e-10,1;UBERON:0005154,1.73e-10,1;UBERON:0005295,1.73e-10,1;UBERON:0004813,1.73e-10,1;UBERON:0005297,1.73e-10,1;UBERON:0005294,1.73e-10,1;UBERON:0010141,1.73e-10,1;UBERON:0005891,1.73e-10,1;UBERON:0000991,3.55e-07,21;UBERON:0009196,3.55e-07,21;UBERON:0009117,3.55e-07,21;UBERON:0005564,3.55e-07,21;UBERON:0004176,7.44e-07,22;UBERON:0003101,7.44e-07,22;UBERON:0000079,7.44e-07,22|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0,5.06599756336621,1.89515962028049,1.30592814099919,0.737201809504527,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0.376627918784408,0.152826811495903,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.637812899895131,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0,0,0.175669571386252,0.392937226493138,0,0.370784442784429,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0.354668382198357,1.12135520028461,0,0.98667019366864,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0.340296549480063,0,0,0.423863802319124,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0.272746120590835,0.286804595389004,0.487894824518382,0.132529768321485,0.348581828608555,0.725627385107593,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.473227200159376,0.337169380156203,0.482022059766964,0.772057809126758,0.653638332277218,0.474541238222193,0.269662616320329,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.630809660135739,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |||
|TSSclassifier=W | |||
|UniProt=A8MZ66 | |||
|association_with_transcript=-411bp_to_ENST00000395781_5end | |||
|description=CAGE_peak_11_at_PEMT_5end | |||
|id=chr17:17495433..17495461,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;5.67e-28;3!CL:0000039;2.10e-12;7!CL:0000586;2.10e-12;7!CL:0000511;2.62e-10;1!CL:0002625;2.62e-10;1!CL:0000216;2.62e-10;1!CL:0000136;7.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.27e-28,3;CL:0000039,2.23e-12,7;CL:0000586,2.23e-12,7;CL:0000511,1.73e-10,1;CL:0002625,1.73e-10,1;CL:0000216,1.73e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.73e-09;10!UBERON:0005564;7.73e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.62e-10;1!DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:3149;2.62e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.08e-10,1;DOID:4549,2.08e-10,1;DOID:5861,2.08e-10,1;DOID:6496,2.08e-10,1;DOID:3151,4.75e-10,1;DOID:3149,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004176!6.39e-07!22;UBERON:0000991!7.25e-07!21;UBERON:0009196!7.25e-07!21;UBERON:0009117!7.25e-07!21;UBERON:0005564!7.25e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.67e-28;3!UBERON:0000473;1.75e-18;8!UBERON:0002072;4.75e-17;5!UBERON:0003135;1.64e-13;11!UBERON:0001013;9.31e-11;14!UBERON:0001136;2.62e-10;1!UBERON:0001343;2.62e-10;1!UBERON:0004910;2.62e-10;1!UBERON:0004813;2.62e-10;1!UBERON:0000991;3.73e-07;21!UBERON:0003101;7.79e-07;22!UBERON:0000079;7.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.27e-28,3;UBERON:0000473,1.53e-18,8;UBERON:0002072,3.42e-17,5;UBERON:0003135,1.49e-13,11;UBERON:0001013,8.20e-11,14;UBERON:0001136,1.73e-10,1;UBERON:0001343,1.73e-10,1;UBERON:0004910,1.73e-10,1;UBERON:0005154,1.73e-10,1;UBERON:0005295,1.73e-10,1;UBERON:0004813,1.73e-10,1;UBERON:0005297,1.73e-10,1;UBERON:0005294,1.73e-10,1;UBERON:0010141,1.73e-10,1;UBERON:0005891,1.73e-10,1;UBERON:0000991,3.55e-07,21;UBERON:0009196,3.55e-07,21;UBERON:0009117,3.55e-07,21;UBERON:0005564,3.55e-07,21;UBERON:0004176,7.44e-07,22;UBERON:0003101,7.44e-07,22;UBERON:0000079,7.44e-07,22 | |||
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| |||
|short_description=p11@PEMT | |||
}} |
Revision as of 12:27, 11 September 2013
Short description: | p11@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PEMT_5end |
Coexpression cluster: | NA |
Association with transcript: | -411bp_to_ENST00000395781_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | A8MZ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.27e-28 | 3 |
germ line cell | 2.23e-12 | 7 |
germ cell | 2.23e-12 | 7 |
androgen binding protein secreting cell | 1.73e-10 | 1 |
seminiferous tubule epithelial cell | 1.73e-10 | 1 |
Sertoli cell | 1.73e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.27e-28 | 3 |
testis | 1.53e-18 | 8 |
hypodermis | 3.42e-17 | 5 |
male reproductive organ | 1.49e-13 | 11 |
adipose tissue | 8.20e-11 | 14 |
mesothelium | 1.73e-10 | 1 |
seminiferous tubule of testis | 1.73e-10 | 1 |
epithelium of male gonad | 1.73e-10 | 1 |
epithelial cord | 1.73e-10 | 1 |
sex cord | 1.73e-10 | 1 |
seminiferous tubule epithelium | 1.73e-10 | 1 |
testis sex cord | 1.73e-10 | 1 |
genital ridge | 1.73e-10 | 1 |
primitive sex cord of indifferent gonad | 1.73e-10 | 1 |
coelomic epithelium | 1.73e-10 | 1 |
gonad | 3.55e-07 | 21 |
indifferent external genitalia | 3.55e-07 | 21 |
indifferent gonad | 3.55e-07 | 21 |
gonad primordium | 3.55e-07 | 21 |
external genitalia | 7.44e-07 | 22 |
male organism | 7.44e-07 | 22 |
male reproductive system | 7.44e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.08e-10 | 1 |
extraosseous chondrosarcoma | 2.08e-10 | 1 |
myxoid chondrosarcoma | 2.08e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 2.08e-10 | 1 |
skin squamous cell carcinoma | 4.75e-10 | 1 |
keratoacanthoma | 4.75e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.