FFCP PHASE1:Hg19::chr17:33864736..33864769,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100506736|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=33920|TSSclassifier=S|UniProt=|association_with_transcript=110bp_to_ENST00000361112,uc002hjn.2_5end|description=CAGE_peak_2_at_SLFN12L_5end|id=chr17:33864736..33864769,-|ontology_enrichment_celltype=CL:0000738!3.63e-22!140;CL:0002087!5.95e-22!119;CL:0000791!3.05e-20!18;CL:0000789!3.05e-20!18;CL:0002420!3.05e-20!18;CL:0002419!3.05e-20!18;CL:0000790!3.05e-20!18;CL:0000838!5.21e-19!52;CL:0000542!2.17e-18!53;CL:0000051!2.17e-18!53;CL:0000084!4.26e-18!25;CL:0000827!4.26e-18!25;CL:0002031!7.55e-18!124;CL:0000037!9.53e-18!172;CL:0000566!9.53e-18!172;CL:0000988!1.97e-17!182;CL:0002032!2.14e-16!165;CL:0000837!2.14e-16!165;CL:0000625!1.71e-13!11;CL:0000624!1.76e-07!6|ontology_enrichment_celltype_v019=CL:0000791;1.80e-35;18!CL:0000789;1.80e-35;18!CL:0002419;1.80e-35;18!CL:0000084;2.82e-33;25!CL:0000625;3.51e-23;11!CL:0000542;3.06e-15;53!CL:0000624;2.71e-12;6!CL:0002087;1.39e-08;104!CL:0000623;1.79e-07;3!CL:0000898;2.16e-07;3!CL:0000226;8.35e-07;3!CL:0000842;8.35e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,1.82e-35,18;CL:0000789,1.82e-35,18;CL:0002420,1.82e-35,18;CL:0002419,1.82e-35,18;CL:0000790,1.82e-35,18;CL:0000084,2.63e-33,25;CL:0000827,2.63e-33,25;CL:0000838,1.69e-31,52;CL:0000542,1.04e-30,53;CL:0000051,1.04e-30,53;CL:0002087,3.60e-24,115;CL:0000625,3.49e-23,11;CL:0000738,1.04e-21,136;CL:0002031,7.23e-19,120;CL:0000988,1.17e-17,177;CL:0000037,1.58e-17,168;CL:0002032,6.79e-16,161;CL:0000837,6.79e-16,161;CL:0000624,2.74e-12,6;CL:0000623,1.87e-07,3;CL:0000825,1.87e-07,3;CL:0000898,2.20e-07,3;CL:0000226,8.36e-07,3;CL:0000842,8.36e-07,3|ontology_enrichment_development_v019=CL:0000790;1.80e-35;18!CL:0000051;3.06e-15;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.88e-39!115;UBERON:0000178!1.81e-14!15;UBERON:0000179!1.81e-14!15;UBERON:0000463!1.81e-14!15;UBERON:0002390!6.32e-12!102;UBERON:0003061!6.32e-12!102;UBERON:0002193!7.18e-11!112;UBERON:0001049!1.63e-08!57;UBERON:0005068!1.63e-08!57;UBERON:0006241!1.63e-08!57;UBERON:0007135!1.63e-08!57;UBERON:0003080!7.16e-07!42|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-22;15!UBERON:0000179;2.63e-22;15!UBERON:0000463;2.63e-22;15!UBERON:0002390;3.25e-15;32!UBERON:0002193;2.37e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.31e-22,15;UBERON:0000179,3.31e-22,15;UBERON:0000463,3.31e-22,15;UBERON:0002390,3.85e-11,98;UBERON:0003061,3.85e-11,98;UBERON:0002193,5.59e-11,108;UBERON:0004177,1.89e-09,7;UBERON:0005057,1.89e-09,7;UBERON:0002370,8.83e-08,4;UBERON:0005058,8.83e-08,4;UBERON:0009113,8.83e-08,4;UBERON:0003295,8.83e-08,4;UBERON:0005562,8.83e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7477873093546,11.0835795757427,14.8763376682854,3.14691421479123,14.9693465257913,1.08371286321253,0,0,0,0,0,0,2.21598163412751,3.20871115952227,3.03815219002193,1.34349284543955,0.971680998056939,1.54545340580512,0.436194716338694,0.377875943688809,0.242584061187816,0.697287110717054,0,0,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,3.87290810150296,0,0,0,0.224723484445085,0.612167784741805,0.641858054152187,0,0.989553900560148,0.598390972864896,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,1.81619850790011,1.47311054395026,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,2.24203425192614,0,6.29471264364266,8.25322601773246,4.93443597598822,5.68434084328306,14.6665019985116,9.9424039204294,3.89653456815823,13.1464339124505,12.0788422064683,12.6274319912664,15.4358202346059,5.50792674820403,3.77172107923647,10.3595879900316,8.5668505513613,14.4901542867526,8.00747441075126,7.22360235842225,4.18142095219907,13.5971211237079,17.6281427056884,14.7759801557531,19.2294965934822,15.9282707162048,20.8346705234054,15.207232711174,11.4437090499107,18.046112172773,22.4875307794223,20.1260664237414,17.243687935342,16.5317529444281,17.1161725301445,9.70323506014753,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,3.24547393654683,3.30846500868608,1.59549552622638,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60425719967636,23.0525989436255,14.2314199407281,12.8343036279748,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71809722777571,6.68714022537712,9.3920250867031,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100506736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33920 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=110bp_to_ENST00000361112,uc002hjn.2_5end | |||
|description=CAGE_peak_2_at_SLFN12L_5end | |||
|id=chr17:33864736..33864769,- | |||
|ontology_enrichment_celltype=CL:0000738!3.63e-22!140;CL:0002087!5.95e-22!119;CL:0000791!3.05e-20!18;CL:0000789!3.05e-20!18;CL:0002420!3.05e-20!18;CL:0002419!3.05e-20!18;CL:0000790!3.05e-20!18;CL:0000838!5.21e-19!52;CL:0000542!2.17e-18!53;CL:0000051!2.17e-18!53;CL:0000084!4.26e-18!25;CL:0000827!4.26e-18!25;CL:0002031!7.55e-18!124;CL:0000037!9.53e-18!172;CL:0000566!9.53e-18!172;CL:0000988!1.97e-17!182;CL:0002032!2.14e-16!165;CL:0000837!2.14e-16!165;CL:0000625!1.71e-13!11;CL:0000624!1.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.80e-35;18!CL:0000789;1.80e-35;18!CL:0002419;1.80e-35;18!CL:0000084;2.82e-33;25!CL:0000625;3.51e-23;11!CL:0000542;3.06e-15;53!CL:0000624;2.71e-12;6!CL:0002087;1.39e-08;104!CL:0000623;1.79e-07;3!CL:0000898;2.16e-07;3!CL:0000226;8.35e-07;3!CL:0000842;8.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.82e-35,18;CL:0000789,1.82e-35,18;CL:0002420,1.82e-35,18;CL:0002419,1.82e-35,18;CL:0000790,1.82e-35,18;CL:0000084,2.63e-33,25;CL:0000827,2.63e-33,25;CL:0000838,1.69e-31,52;CL:0000542,1.04e-30,53;CL:0000051,1.04e-30,53;CL:0002087,3.60e-24,115;CL:0000625,3.49e-23,11;CL:0000738,1.04e-21,136;CL:0002031,7.23e-19,120;CL:0000988,1.17e-17,177;CL:0000037,1.58e-17,168;CL:0002032,6.79e-16,161;CL:0000837,6.79e-16,161;CL:0000624,2.74e-12,6;CL:0000623,1.87e-07,3;CL:0000825,1.87e-07,3;CL:0000898,2.20e-07,3;CL:0000226,8.36e-07,3;CL:0000842,8.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.80e-35;18!CL:0000051;3.06e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-39!115;UBERON:0000178!1.81e-14!15;UBERON:0000179!1.81e-14!15;UBERON:0000463!1.81e-14!15;UBERON:0002390!6.32e-12!102;UBERON:0003061!6.32e-12!102;UBERON:0002193!7.18e-11!112;UBERON:0001049!1.63e-08!57;UBERON:0005068!1.63e-08!57;UBERON:0006241!1.63e-08!57;UBERON:0007135!1.63e-08!57;UBERON:0003080!7.16e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-22;15!UBERON:0000179;2.63e-22;15!UBERON:0000463;2.63e-22;15!UBERON:0002390;3.25e-15;32!UBERON:0002193;2.37e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.31e-22,15;UBERON:0000179,3.31e-22,15;UBERON:0000463,3.31e-22,15;UBERON:0002390,3.85e-11,98;UBERON:0003061,3.85e-11,98;UBERON:0002193,5.59e-11,108;UBERON:0004177,1.89e-09,7;UBERON:0005057,1.89e-09,7;UBERON:0002370,8.83e-08,4;UBERON:0005058,8.83e-08,4;UBERON:0009113,8.83e-08,4;UBERON:0003295,8.83e-08,4;UBERON:0005562,8.83e-08,4 | |||
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| |||
|short_description=p2@SLFN12L | |||
}} |
Revision as of 13:04, 11 September 2013
Short description: | p2@SLFN12L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLFN12L_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_ENST00000361112, uc002hjn.2_5end |
EntrezGene: | SLFN12L |
HGNC: | 33920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.82e-35 | 18 |
alpha-beta T cell | 1.82e-35 | 18 |
immature T cell | 1.82e-35 | 18 |
mature T cell | 1.82e-35 | 18 |
immature alpha-beta T cell | 1.82e-35 | 18 |
T cell | 2.63e-33 | 25 |
pro-T cell | 2.63e-33 | 25 |
lymphoid lineage restricted progenitor cell | 1.69e-31 | 52 |
lymphocyte | 1.04e-30 | 53 |
common lymphoid progenitor | 1.04e-30 | 53 |
nongranular leukocyte | 3.60e-24 | 115 |
CD8-positive, alpha-beta T cell | 3.49e-23 | 11 |
leukocyte | 1.04e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 7.23e-19 | 120 |
hematopoietic cell | 1.17e-17 | 177 |
hematopoietic stem cell | 1.58e-17 | 168 |
hematopoietic oligopotent progenitor cell | 6.79e-16 | 161 |
hematopoietic multipotent progenitor cell | 6.79e-16 | 161 |
CD4-positive, alpha-beta T cell | 2.74e-12 | 6 |
natural killer cell | 1.87e-07 | 3 |
pro-NK cell | 1.87e-07 | 3 |
naive T cell | 2.20e-07 | 3 |
single nucleate cell | 8.36e-07 | 3 |
mononuclear cell | 8.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.31e-22 | 15 |
haemolymphatic fluid | 3.31e-22 | 15 |
organism substance | 3.31e-22 | 15 |
hematopoietic system | 3.85e-11 | 98 |
blood island | 3.85e-11 | 98 |
hemolymphoid system | 5.59e-11 | 108 |
hemopoietic organ | 1.89e-09 | 7 |
immune organ | 1.89e-09 | 7 |
thymus | 8.83e-08 | 4 |
hemolymphoid system gland | 8.83e-08 | 4 |
thymic region | 8.83e-08 | 4 |
pharyngeal gland | 8.83e-08 | 4 |
thymus primordium | 8.83e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.