FFCP PHASE1:Hg19::chr17:77809975..77809980,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C326|description=CAGE_peak_at_chr17:77809975..77809980,-|id=chr17:77809975..77809980,-|ontology_enrichment_celltype=CL:0002322!1.41e-09!5;CL:0000066!1.52e-09!254;CL:0000242!1.88e-07!2|ontology_enrichment_celltype_v019=CL:0000167;6.93e-16;1!CL:0000164;6.93e-16;1!CL:0000502;6.93e-16;1!CL:0000172;6.93e-16;1!CL:0000173;6.93e-16;1|ontology_enrichment_celltype_v019_2=CL:0000167,6.44e-16,1;CL:0000164,6.44e-16,1;CL:0000502,6.44e-16,1;CL:0000172,6.44e-16,1;CL:0000173,6.44e-16,1;CL:0002351,6.44e-16,1|ontology_enrichment_development_v019=CL:0002351;6.93e-16;1!UBERON:0001041;6.65e-08;30|ontology_enrichment_disease=DOID:305!4.26e-20!106;DOID:162!6.89e-19!235;DOID:14566!2.98e-18!239;DOID:0050687!1.06e-17!143;DOID:0050686!1.97e-09!137;DOID:5093!3.70e-08!4;DOID:1612!3.70e-08!4;DOID:3493!6.92e-08!2;DOID:1325!1.47e-07!7;DOID:3904!1.47e-07!7;DOID:3119!1.55e-07!14;DOID:299!6.60e-07!25|ontology_enrichment_disease_v019=DOID:3493;1.78e-29;2!DOID:1036;1.94e-16;8!DOID:4430;6.93e-16;1!DOID:5093;3.41e-15;4!DOID:1612;3.41e-15;4!DOID:299;2.05e-09;25!DOID:1325;4.21e-09;7!DOID:3904;4.21e-09;7!DOID:3910;2.31e-08;2!DOID:3905;2.86e-07;9|ontology_enrichment_disease_v019_2=DOID:3493,2.56e-29,2;DOID:1036,1.49e-16,8;DOID:4430,6.44e-16,1;DOID:5093,2.96e-15,4;DOID:1612,2.96e-15,4;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239;DOID:305,5.44e-10,106;DOID:299,2.07e-09,25;DOID:1325,4.39e-09,7;DOID:3904,4.39e-09,7;DOID:0050687,6.29e-09,143;DOID:3910,2.48e-08,2;DOID:3905,2.95e-07,9|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.48e-08,2;UBERON:0002173,2.48e-08,2;UBERON:0002186,2.48e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,12.7105034019682,0,0,0,0,0,0,0,0.520855522170466,0,0,0,1.27126825146383,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,1.35357396370308,1.9606253431774,1.51039428278258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0.288180834308212,0.343609788497747,0,0.14405479798815,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18112977817699,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,5.00566191437739,1.21917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0,0.22589216407792,0,3.62310824560016,0,0,0,0,5.65623713043902,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.275684698604535,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:77809975..77809980,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr17:77809975..77809980,- | |||
|id=chr17:77809975..77809980,- | |||
|ontology_enrichment_celltype=CL:0002322!1.41e-09!5;CL:0000066!1.52e-09!254;CL:0000242!1.88e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000167;6.93e-16;1!CL:0000164;6.93e-16;1!CL:0000502;6.93e-16;1!CL:0000172;6.93e-16;1!CL:0000173;6.93e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.44e-16,1;CL:0000164,6.44e-16,1;CL:0000502,6.44e-16,1;CL:0000172,6.44e-16,1;CL:0000173,6.44e-16,1;CL:0002351,6.44e-16,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.93e-16;1!UBERON:0001041;6.65e-08;30 | |||
|ontology_enrichment_disease=DOID:305!4.26e-20!106;DOID:162!6.89e-19!235;DOID:14566!2.98e-18!239;DOID:0050687!1.06e-17!143;DOID:0050686!1.97e-09!137;DOID:5093!3.70e-08!4;DOID:1612!3.70e-08!4;DOID:3493!6.92e-08!2;DOID:1325!1.47e-07!7;DOID:3904!1.47e-07!7;DOID:3119!1.55e-07!14;DOID:299!6.60e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.78e-29;2!DOID:1036;1.94e-16;8!DOID:4430;6.93e-16;1!DOID:5093;3.41e-15;4!DOID:1612;3.41e-15;4!DOID:299;2.05e-09;25!DOID:1325;4.21e-09;7!DOID:3904;4.21e-09;7!DOID:3910;2.31e-08;2!DOID:3905;2.86e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.56e-29,2;DOID:1036,1.49e-16,8;DOID:4430,6.44e-16,1;DOID:5093,2.96e-15,4;DOID:1612,2.96e-15,4;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239;DOID:305,5.44e-10,106;DOID:299,2.07e-09,25;DOID:1325,4.39e-09,7;DOID:3904,4.39e-09,7;DOID:0050687,6.29e-09,143;DOID:3910,2.48e-08,2;DOID:3905,2.95e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.48e-08,2;UBERON:0002173,2.48e-08,2;UBERON:0002186,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,12.7105034019682,0,0,0,0,0,0,0,0.520855522170466,0,0,0,1.27126825146383,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,1.35357396370308,1.9606253431774,1.51039428278258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0.288180834308212,0.343609788497747,0,0.14405479798815,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18112977817699,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,5.00566191437739,1.21917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0,0.22589216407792,0,3.62310824560016,0,0,0,0,5.65623713043902,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.275684698604535,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:77809975..77809980,- | |||
}} |
Revision as of 16:16, 11 September 2013
Short description: | p@chr17:77809975..77809980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:77809975..77809980, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.44e-16 | 1 |
enteroendocrine cell | 6.44e-16 | 1 |
type D enteroendocrine cell | 6.44e-16 | 1 |
somatostatin secreting cell | 6.44e-16 | 1 |
pancreatic D cell | 6.44e-16 | 1 |
progenitor cell of endocrine pancreas | 6.44e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.48e-08 | 2 |
alveolar duct | 2.48e-08 | 2 |
bronchiole | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.56e-29 | 2 |
chronic leukemia | 1.49e-16 | 8 |
somatostatinoma | 6.44e-16 | 1 |
thoracic cancer | 2.96e-15 | 4 |
breast cancer | 2.96e-15 | 4 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |
carcinoma | 5.44e-10 | 106 |
adenocarcinoma | 2.07e-09 | 25 |
bronchus cancer | 4.39e-09 | 7 |
bronchogenic carcinoma | 4.39e-09 | 7 |
cell type cancer | 6.29e-09 | 143 |
lung adenocarcinoma | 2.48e-08 | 2 |
lung carcinoma | 2.95e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.