FFCP PHASE1:Hg19::chr17:79609296..79609335,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83882|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29942|TSSclassifier=S|UniProt=Q9H1Z9,Q6PJ65|association_with_transcript=-13bp_to_ENST00000328585,NM_031945,uc002kaw.1,uc010did.1,uc010die.2_5end|coexpression_cluster_id=C58|description=CAGE_peak_2_at_TSPAN10_5end|id=chr17:79609296..79609335,+|ontology_enrichment_celltype=CL:0000055!1.22e-24!180;CL:0000057!3.19e-13!75;CL:0000548!7.34e-11!679;CL:0000004!7.34e-11!679;CL:0000255!7.34e-11!679;CL:0000012!2.06e-10!682;CL:0000147!4.24e-09!14;CL:0002620!5.09e-09!23;CL:0000192!1.24e-08!42;CL:0000514!1.24e-08!42;CL:0002077!1.75e-08!33;CL:0000680!1.85e-08!57;CL:0000056!1.85e-08!57;CL:0000355!1.85e-08!57;CL:0000144!6.51e-08!625;CL:0000220!1.18e-07!246;CL:0000183!1.54e-07!59;CL:0002321!2.38e-07!248;CL:0000187!2.71e-07!54;CL:0000359!8.41e-07!32;CL:0000325!9.07e-07!39|ontology_enrichment_celltype_v019=CL:0002620;1.48e-11;23!CL:0000147;1.75e-10;14!CL:0000148;4.44e-08;10|ontology_enrichment_celltype_v019_2=CL:0000057,3.35e-15,76;CL:0002620,1.16e-11,23;CL:0000147,2.23e-10,14;CL:0000148,5.63e-08,10;CL:0000541,5.63e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.25e-15!95;UBERON:0002097!6.64e-12!40;UBERON:0002199!6.81e-12!45;UBERON:0002416!6.81e-12!45;UBERON:0000914!5.34e-10!83;UBERON:0002329!5.34e-10!83;UBERON:0003077!5.34e-10!83;UBERON:0003059!5.34e-10!83;UBERON:0007282!5.34e-10!83;UBERON:0009618!5.34e-10!83;UBERON:0007285!5.34e-10!83;UBERON:0004290!9.70e-08!70;UBERON:0000486!1.03e-07!82;UBERON:0001134!4.62e-07!61;UBERON:0002036!4.62e-07!61;UBERON:0003082!4.62e-07!61;UBERON:0002385!9.00e-07!63;UBERON:0001015!9.00e-07!63;UBERON:0000383!9.00e-07!63|ontology_enrichment_uberon_v019=UBERON:0002097;9.38e-13;41!UBERON:0002199;9.84e-11;46!UBERON:0002416;9.84e-11;46!UBERON:0003102;6.32e-10;50!UBERON:0010371;6.57e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.16e-16,46;UBERON:0002416,1.16e-16,46;UBERON:0002097,4.04e-16,41;UBERON:0003102,3.19e-13,99|phase1_expression=1.09007027562334,0,0,0,0.446961094427288,0,0,1.89515962028049,0,0,0,0,0,3.09415882400117,1.65698687863958,0.672325146451775,1.80808358407193,1.46062018077475,1.95173119516203,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0.895661896959697,11.3362783106643,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,3.00802746381534,1.01392563272577,0,1.45990461090791,0.0945348171640679,0,0.175669571386252,0.130979075497713,1.45718115317017,2.22470665670658,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,8.73900593367244,6.59724227722272,2.12801029319014,0,0,1.48000529050296,0,0.269421344139376,0,0,0,0,1.5608003841516,0,1.04614076386261,0.352303495931295,0,0,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,1.7308685049499,0.910161361938026,2.15585442544872,0.336672227908132,0.125118519871964,0,3.07284334616587,5.82326812018137,1.20190447125277,0.113432183160021,4.84352016359927,1.2813443329114,1.69545520927649,10.5031883629541,1.54578793857658,4.3798891807757,4.83903826462134,10.2953562667172,4.57953924257634,4.54380793639406,2.76149695926898,0.484938170456436,15.2654124782144,4.83610071492673,2.20428770003634,1.35282597214308,1.36373060295417,0,0,0,0.813357600086629,1.14027160516907,0,0,1.56449532329816,1.28648187638577,4.14404764057442,1.39310378409594,5.77503585335668,2.60274960087657,2.86593973132773,0.964044119533928,1.65440959098591,3.7039505495709,1.42362371466658,3.91010793664477,3.13954344200554,1.15424147083917,0,0,0,0,0,0,0,0,0,0.857839051492628,2.96325770603289,2.24803506515239,1.00528972411631,0.185176890317059,0.325808305310325,2.07986957055916,0,0.463721619900307,0.70445216541493,0.144366447761074,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0.93733833986777,3.69560682037491,0.708875486211932,0.358234090811393,0.290633938513962,0,0,0.176096868026452,0,0,0.75745460055828,59.2435353745937,98.9350022195939,80.8800385749324,59.8753561079468,21.7994284531046,148.369470574895,129.479373981652,0,0,0,10.9880958394111,10.7296933755565,0.845302752556,3.98907174877306,5.2003718455683,1.02882949704857,0,1.3321108950805,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,2.71295439353627,6.97226766880235,1.89948683245908,14.5948536769429,1.50677127429638,4.21667878966063,0.718874566474748,1.14861935834114,0,1.73737568001095,3.08214483825575,4.29746311775749,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.813795071099207,0.207970861530807,0.892144943985809,0.788512075169673,0.117141414992713,3.61135319673263,2.27407504055985,0,2.65690239414175,3.50301420229236,5.82120216936155,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29942 | |||
|TSSclassifier=S | |||
|UniProt=Q9H1Z9,Q6PJ65 | |||
|association_with_transcript=-13bp_to_ENST00000328585,NM_031945,uc002kaw.1,uc010did.1,uc010die.2_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_TSPAN10_5end | |||
|id=chr17:79609296..79609335,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-24!180;CL:0000057!3.19e-13!75;CL:0000548!7.34e-11!679;CL:0000004!7.34e-11!679;CL:0000255!7.34e-11!679;CL:0000012!2.06e-10!682;CL:0000147!4.24e-09!14;CL:0002620!5.09e-09!23;CL:0000192!1.24e-08!42;CL:0000514!1.24e-08!42;CL:0002077!1.75e-08!33;CL:0000680!1.85e-08!57;CL:0000056!1.85e-08!57;CL:0000355!1.85e-08!57;CL:0000144!6.51e-08!625;CL:0000220!1.18e-07!246;CL:0000183!1.54e-07!59;CL:0002321!2.38e-07!248;CL:0000187!2.71e-07!54;CL:0000359!8.41e-07!32;CL:0000325!9.07e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.48e-11;23!CL:0000147;1.75e-10;14!CL:0000148;4.44e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.35e-15,76;CL:0002620,1.16e-11,23;CL:0000147,2.23e-10,14;CL:0000148,5.63e-08,10;CL:0000541,5.63e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.25e-15!95;UBERON:0002097!6.64e-12!40;UBERON:0002199!6.81e-12!45;UBERON:0002416!6.81e-12!45;UBERON:0000914!5.34e-10!83;UBERON:0002329!5.34e-10!83;UBERON:0003077!5.34e-10!83;UBERON:0003059!5.34e-10!83;UBERON:0007282!5.34e-10!83;UBERON:0009618!5.34e-10!83;UBERON:0007285!5.34e-10!83;UBERON:0004290!9.70e-08!70;UBERON:0000486!1.03e-07!82;UBERON:0001134!4.62e-07!61;UBERON:0002036!4.62e-07!61;UBERON:0003082!4.62e-07!61;UBERON:0002385!9.00e-07!63;UBERON:0001015!9.00e-07!63;UBERON:0000383!9.00e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.38e-13;41!UBERON:0002199;9.84e-11;46!UBERON:0002416;9.84e-11;46!UBERON:0003102;6.32e-10;50!UBERON:0010371;6.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.16e-16,46;UBERON:0002416,1.16e-16,46;UBERON:0002097,4.04e-16,41;UBERON:0003102,3.19e-13,99 | |||
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| |||
|short_description=p2@TSPAN10 | |||
}} |
Revision as of 16:26, 11 September 2013
Short description: | p2@TSPAN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TSPAN10_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -13bp_to_ENST00000328585, NM_031945, uc002kaw.1, uc010did.1, uc010die.2_5end |
EntrezGene: | TSPAN10 |
HGNC: | 29942 |
UniProt: | Q9H1Z9Q6PJ65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.35e-15 | 76 |
skin fibroblast | 1.16e-11 | 23 |
pigment cell | 2.23e-10 | 14 |
melanocyte | 5.63e-08 | 10 |
melanoblast | 5.63e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
integument | 1.16e-16 | 46 |
integumental system | 1.16e-16 | 46 |
skin of body | 4.04e-16 | 41 |
surface structure | 3.19e-13 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.