FFCP PHASE1:Hg19::chr18:20275091..20275099,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:20275091..20275099,+|id=chr18:20275091..20275099,+|ontology_enrichment_celltype=CL:0000055!1.04e-11!180;CL:0000187!1.94e-08!54;CL:0000183!5.66e-08!59;CL:0000680!1.24e-07!57;CL:0000056!1.24e-07!57;CL:0000355!1.24e-07!57;CL:0000057!1.81e-07!75;CL:0002334!2.40e-07!12;CL:0000188!3.65e-07!9;CL:0000393!6.39e-07!60;CL:0000211!6.39e-07!60|ontology_enrichment_celltype_v019=CL:0002622;1.03e-20;3!CL:0000077;1.18e-16;19!CL:0002568;2.61e-08;1!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0002581;6.40e-08;1!CL:0000216;6.40e-08;1|ontology_enrichment_celltype_v019_2=CL:0002622,8.16e-21,3;CL:0000077,8.32e-17,19;CL:0002568,2.19e-08,1;CL:0000511,4.40e-08,1;CL:0002625,4.40e-08,1;CL:0000216,4.40e-08,1;CL:0002581,5.40e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3369;2.61e-08;1!DOID:3571;2.61e-08;1|ontology_enrichment_disease_v019_2=DOID:3369,2.52e-08,1;DOID:3571,3.11e-08,1|ontology_enrichment_uberon=UBERON:0002385!1.85e-07!63;UBERON:0001015!1.85e-07!63;UBERON:0000383!1.85e-07!63;UBERON:0001134!2.59e-07!61;UBERON:0002036!2.59e-07!61;UBERON:0003082!2.59e-07!61;UBERON:0004290!5.95e-07!70|ontology_enrichment_uberon_v019=UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0004871,4.04e-08,8;UBERON:0001136,4.40e-08,1;UBERON:0001343,4.40e-08,1;UBERON:0004910,4.40e-08,1;UBERON:0005154,4.40e-08,1;UBERON:0005295,4.40e-08,1;UBERON:0004813,4.40e-08,1;UBERON:0005297,4.40e-08,1;UBERON:0005294,4.40e-08,1;UBERON:0010141,4.40e-08,1;UBERON:0005891,4.40e-08,1;UBERON:0004122,2.33e-07,15|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.0945348171640679,1.10864698731282,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,2.51577443545116,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0,0.368199594569197,0.646584227275248,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,2.58543431515556,0,0,3.19125739901845,1.04007436911366,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,3.01439377059586,1.74306691720059,1.49959486773086,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.896974044789907,1.02341449813341,0.804269605718038,1.48418066444991,0.154209693802656,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0,0,1.83703117063371,1.27463817604702,2.22911505431021,0,0,0,0,0,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.290033387828457,0.0852266274161009,0.712256285173899,0,0.192190067365106,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.949138274156178,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.719489830333259,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,0,0.409499734223957,0.989838023675989,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0.658589785919804,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06246791284767,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,1.43176155503017,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.296521128680622,0.370691816839509,0.417687798021821,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0.822251547880505,0.19871461170299,0,0,0.801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,1.44475294950759,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.851940108927109,0.453248366080503,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0.777186002913902,0,0,0,0.310525913752519,0,0.53168342911599,0,1.6528336989694,0.380805212168795,0.406870733204662,0,0.644463342254931,0.464033759878494,0,0,0,0.336749488765919,0,0,0.643324774124777,0,0,1.389134845943,0,2.32815493405934,0,6.35923743778251,0,0.38582807654183,0.506827321959218,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,1.9307228228694,0,0,0.488965776731466,0,0,0,0|short_description=p@chr18:20275091..20275099,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:20275091..20275099,+ | |||
|id=chr18:20275091..20275099,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-11!180;CL:0000187!1.94e-08!54;CL:0000183!5.66e-08!59;CL:0000680!1.24e-07!57;CL:0000056!1.24e-07!57;CL:0000355!1.24e-07!57;CL:0000057!1.81e-07!75;CL:0002334!2.40e-07!12;CL:0000188!3.65e-07!9;CL:0000393!6.39e-07!60;CL:0000211!6.39e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.03e-20;3!CL:0000077;1.18e-16;19!CL:0002568;2.61e-08;1!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0002581;6.40e-08;1!CL:0000216;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,8.16e-21,3;CL:0000077,8.32e-17,19;CL:0002568,2.19e-08,1;CL:0000511,4.40e-08,1;CL:0002625,4.40e-08,1;CL:0000216,4.40e-08,1;CL:0002581,5.40e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;2.61e-08;1!DOID:3571;2.61e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.52e-08,1;DOID:3571,3.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.85e-07!63;UBERON:0001015!1.85e-07!63;UBERON:0000383!1.85e-07!63;UBERON:0001134!2.59e-07!61;UBERON:0002036!2.59e-07!61;UBERON:0003082!2.59e-07!61;UBERON:0004290!5.95e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,4.04e-08,8;UBERON:0001136,4.40e-08,1;UBERON:0001343,4.40e-08,1;UBERON:0004910,4.40e-08,1;UBERON:0005154,4.40e-08,1;UBERON:0005295,4.40e-08,1;UBERON:0004813,4.40e-08,1;UBERON:0005297,4.40e-08,1;UBERON:0005294,4.40e-08,1;UBERON:0010141,4.40e-08,1;UBERON:0005891,4.40e-08,1;UBERON:0004122,2.33e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.0945348171640679,1.10864698731282,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,2.51577443545116,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0,0.368199594569197,0.646584227275248,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,2.58543431515556,0,0,3.19125739901845,1.04007436911366,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,3.01439377059586,1.74306691720059,1.49959486773086,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.896974044789907,1.02341449813341,0.804269605718038,1.48418066444991,0.154209693802656,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0,0,1.83703117063371,1.27463817604702,2.22911505431021,0,0,0,0,0,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.290033387828457,0.0852266274161009,0.712256285173899,0,0.192190067365106,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.949138274156178,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.719489830333259,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,0,0.409499734223957,0.989838023675989,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0.658589785919804,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06246791284767,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,1.43176155503017,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.296521128680622,0.370691816839509,0.417687798021821,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0.822251547880505,0.19871461170299,0,0,0.801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,1.44475294950759,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.851940108927109,0.453248366080503,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0.777186002913902,0,0,0,0.310525913752519,0,0.53168342911599,0,1.6528336989694,0.380805212168795,0.406870733204662,0,0.644463342254931,0.464033759878494,0,0,0,0.336749488765919,0,0,0.643324774124777,0,0,1.389134845943,0,2.32815493405934,0,6.35923743778251,0,0.38582807654183,0.506827321959218,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,1.9307228228694,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p@chr18:20275091..20275099,+ | |||
}} |
Revision as of 16:59, 11 September 2013
Short description: | p@chr18:20275091..20275099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:20275091..20275099, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 8.16e-21 | 3 |
mesothelial cell | 8.32e-17 | 19 |
mesenchymal stem cell of Wharton's jelly | 2.19e-08 | 1 |
androgen binding protein secreting cell | 4.40e-08 | 1 |
seminiferous tubule epithelial cell | 4.40e-08 | 1 |
Sertoli cell | 4.40e-08 | 1 |
perirenal preadipocyte | 5.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 4.04e-08 | 8 |
mesothelium | 4.40e-08 | 1 |
seminiferous tubule of testis | 4.40e-08 | 1 |
epithelium of male gonad | 4.40e-08 | 1 |
epithelial cord | 4.40e-08 | 1 |
sex cord | 4.40e-08 | 1 |
seminiferous tubule epithelium | 4.40e-08 | 1 |
testis sex cord | 4.40e-08 | 1 |
genital ridge | 4.40e-08 | 1 |
primitive sex cord of indifferent gonad | 4.40e-08 | 1 |
coelomic epithelium | 4.40e-08 | 1 |
genitourinary system | 2.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.52e-08 | 1 |
liver cancer | 3.11e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.