FFCP PHASE1:Hg19::chr18:25531871..25531894,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1759|TSSclassifier=S|UniProt=|association_with_transcript=-66bp_to_BX648579_5end|description=CAGE_peak_15_at_CDH2_5end|id=chr18:25531871..25531894,-|ontology_enrichment_celltype=CL:0002334!1.20e-11!12;CL:0000055!2.00e-10!180;CL:0000057!2.26e-08!75|ontology_enrichment_celltype_v019=CL:0002334;3.00e-22;12!CL:0002579;3.73e-18;3!CL:0002580;3.22e-17;3!CL:0002616;2.81e-07;1!CL:0000057;3.50e-07;73!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002568;7.34e-07;1!CL:0002581;7.34e-07;1!CL:0000216;7.34e-07;1|ontology_enrichment_celltype_v019_2=CL:0002334,3.09e-22,12;CL:0002579,6.50e-18,3;CL:0002580,2.67e-17,3;CL:0000057,2.21e-11,76;CL:0002616,2.66e-07,1;CL:0000511,5.06e-07,1;CL:0002625,5.06e-07,1;CL:0000216,5.06e-07,1;CL:0002581,5.37e-07,1;CL:0002568,9.51e-07,1|ontology_enrichment_development_v019=UBERON:0010226;7.34e-07;1|ontology_enrichment_disease=DOID:2394!1.28e-08!14|ontology_enrichment_disease_v019=DOID:3571;7.34e-07;1|ontology_enrichment_disease_v019_2=DOID:3571,6.76e-07,1|ontology_enrichment_uberon=UBERON:0000955!1.29e-07!69;UBERON:0006238!1.29e-07!69;UBERON:0005743!1.38e-07!86;UBERON:0002020!2.28e-07!34;UBERON:0003528!2.28e-07!34;UBERON:0000025!6.08e-07!194;UBERON:0001017!6.36e-07!82;UBERON:0003075!7.74e-07!86;UBERON:0007284!7.74e-07!86;UBERON:0000475!8.51e-07!365;UBERON:0003056!8.53e-07!61|ontology_enrichment_uberon_v019=UBERON:0003688;7.34e-16;6!UBERON:0002358;7.34e-16;6!UBERON:0003684;7.34e-16;6!UBERON:0001178;7.34e-16;6!UBERON:0005406;1.81e-12;2!UBERON:0004457;1.31e-10;9!UBERON:0000042;1.31e-10;9!UBERON:0002084;7.34e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0001282;7.34e-07;1!UBERON:0009842;7.34e-07;1!UBERON:0003704;7.34e-07;1!UBERON:0002082;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1!UBERON:0001171;7.34e-07;1!UBERON:0001172;7.34e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.06e-15,6;UBERON:0002358,1.06e-15,6;UBERON:0003684,1.06e-15,6;UBERON:0001178,1.06e-15,6;UBERON:0005406,1.25e-12,2;UBERON:0004457,6.77e-08,12;UBERON:0000042,6.77e-08,12;UBERON:0001282,4.01e-07,1;UBERON:0009842,4.01e-07,1;UBERON:0003704,4.01e-07,1;UBERON:0001171,4.01e-07,1;UBERON:0001172,4.01e-07,1;UBERON:0001136,5.06e-07,1;UBERON:0001343,5.06e-07,1;UBERON:0004910,5.06e-07,1;UBERON:0005154,5.06e-07,1;UBERON:0005295,5.06e-07,1;UBERON:0004813,5.06e-07,1;UBERON:0005297,5.06e-07,1;UBERON:0005294,5.06e-07,1;UBERON:0010141,5.06e-07,1;UBERON:0005891,5.06e-07,1;UBERON:0002084,7.57e-07,1;UBERON:0002082,7.57e-07,1;UBERON:0010226,7.57e-07,1|phase1_expression=0.908391896352783,0.856402095563933,2.39622486963151,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.614843499851882,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.529636723252875,0.286836620748814,0.709336764396714,1.12135520028461,0,1.2333377420858,0,0,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.567160915800105,1.25572744982203,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.744467425326359,1.68776332241266,0.487185025805993,0.504867548488229,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0,0,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.34779121492523,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,3.01439377059586,0.871533458600294,3.09916272664377,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,1.96462066103151,2.94720043288112,1.02341449813341,4.50390979202101,1.48418066444991,0.462629081407967,0.532685175939381,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0.34444334449382,0.182091168006717,0,0,0.385076685522074,0,1.46139224653261,0.527758144464379,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,1.6068392984416,0.096670718292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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1759 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_BX648579_5end | |||
|description=CAGE_peak_15_at_CDH2_5end | |||
|id=chr18:25531871..25531894,- | |||
|ontology_enrichment_celltype=CL:0002334!1.20e-11!12;CL:0000055!2.00e-10!180;CL:0000057!2.26e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.00e-22;12!CL:0002579;3.73e-18;3!CL:0002580;3.22e-17;3!CL:0002616;2.81e-07;1!CL:0000057;3.50e-07;73!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002568;7.34e-07;1!CL:0002581;7.34e-07;1!CL:0000216;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.09e-22,12;CL:0002579,6.50e-18,3;CL:0002580,2.67e-17,3;CL:0000057,2.21e-11,76;CL:0002616,2.66e-07,1;CL:0000511,5.06e-07,1;CL:0002625,5.06e-07,1;CL:0000216,5.06e-07,1;CL:0002581,5.37e-07,1;CL:0002568,9.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.34e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!1.28e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3571;7.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.29e-07!69;UBERON:0006238!1.29e-07!69;UBERON:0005743!1.38e-07!86;UBERON:0002020!2.28e-07!34;UBERON:0003528!2.28e-07!34;UBERON:0000025!6.08e-07!194;UBERON:0001017!6.36e-07!82;UBERON:0003075!7.74e-07!86;UBERON:0007284!7.74e-07!86;UBERON:0000475!8.51e-07!365;UBERON:0003056!8.53e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.34e-16;6!UBERON:0002358;7.34e-16;6!UBERON:0003684;7.34e-16;6!UBERON:0001178;7.34e-16;6!UBERON:0005406;1.81e-12;2!UBERON:0004457;1.31e-10;9!UBERON:0000042;1.31e-10;9!UBERON:0002084;7.34e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0001282;7.34e-07;1!UBERON:0009842;7.34e-07;1!UBERON:0003704;7.34e-07;1!UBERON:0002082;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1!UBERON:0001171;7.34e-07;1!UBERON:0001172;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.06e-15,6;UBERON:0002358,1.06e-15,6;UBERON:0003684,1.06e-15,6;UBERON:0001178,1.06e-15,6;UBERON:0005406,1.25e-12,2;UBERON:0004457,6.77e-08,12;UBERON:0000042,6.77e-08,12;UBERON:0001282,4.01e-07,1;UBERON:0009842,4.01e-07,1;UBERON:0003704,4.01e-07,1;UBERON:0001171,4.01e-07,1;UBERON:0001172,4.01e-07,1;UBERON:0001136,5.06e-07,1;UBERON:0001343,5.06e-07,1;UBERON:0004910,5.06e-07,1;UBERON:0005154,5.06e-07,1;UBERON:0005295,5.06e-07,1;UBERON:0004813,5.06e-07,1;UBERON:0005297,5.06e-07,1;UBERON:0005294,5.06e-07,1;UBERON:0010141,5.06e-07,1;UBERON:0005891,5.06e-07,1;UBERON:0002084,7.57e-07,1;UBERON:0002082,7.57e-07,1;UBERON:0010226,7.57e-07,1 | |||
|phase1_expression=0.908391896352783,0.856402095563933,2.39622486963151,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.614843499851882,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.529636723252875,0.286836620748814,0.709336764396714,1.12135520028461,0,1.2333377420858,0,0,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.567160915800105,1.25572744982203,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.744467425326359,1.68776332241266,0.487185025805993,0.504867548488229,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0,0,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.34779121492523,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,3.01439377059586,0.871533458600294,3.09916272664377,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,1.96462066103151,2.94720043288112,1.02341449813341,4.50390979202101,1.48418066444991,0.462629081407967,0.532685175939381,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0.34444334449382,0.182091168006717,0,0,0.385076685522074,0,1.46139224653261,0.527758144464379,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0.340906509664404,0.534192213880424,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0.551365343546124,1.99031692572366,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0,0,1.02268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.343972064943233,0,0,0,0,0,0.451961481561065,0.411125773940253,0.596143835108969,0.0633107959558787,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0.407712618220842,0.418411385249333,0.407992870545287,0.288950589901519,0,0.273810757783986,0,0,0.525774708558629,0,0,0,0.599037001496973,0.858452096273142,0.446342914883745,0.134366944973453,1.44119953416961,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.295282444544246,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,1.32418394073086,0,0,1.72844298240254,0,0,0,0.170388021785422,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0.276697269872462,0.37494122388632,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0.53168342911599,1.04349012362347,0.601030435988874,1.90402606084398,0.813741466409323,0.363697318405119,0.966695013382396,0.464033759878494,2.3885753321917,0.400027764663154,0,0.336749488765919,0,0.385239660814607,0.428883182749851,0.260994291965212,0,0.463044948647668,0,0.179088841081487,0,0,0,0.771656153083659,0.168942440653073,0,0.345430341731199,0,0.414775308455192,0,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.19024743058172,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0.135939465953663,0,0,0.1112314018920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| |||
|short_description=p15@CDH2 | |||
}} |
Revision as of 17:08, 11 September 2013
Short description: | p15@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_CDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_BX648579_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.09e-22 | 12 |
omentum preadipocyte | 6.50e-18 | 3 |
preadipocyte of the breast | 2.67e-17 | 3 |
fibroblast | 2.21e-11 | 76 |
perirenal adipocyte cell | 2.66e-07 | 1 |
androgen binding protein secreting cell | 5.06e-07 | 1 |
seminiferous tubule epithelial cell | 5.06e-07 | 1 |
Sertoli cell | 5.06e-07 | 1 |
perirenal preadipocyte | 5.37e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.06e-15 | 6 |
peritoneum | 1.06e-15 | 6 |
abdominal cavity | 1.06e-15 | 6 |
visceral peritoneum | 1.06e-15 | 6 |
perirenal fat | 1.25e-12 | 2 |
cavity lining | 6.77e-08 | 12 |
serous membrane | 6.77e-08 | 12 |
intralobular bile duct | 4.01e-07 | 1 |
acinus | 4.01e-07 | 1 |
intrahepatic bile duct | 4.01e-07 | 1 |
portal lobule | 4.01e-07 | 1 |
hepatic acinus | 4.01e-07 | 1 |
mesothelium | 5.06e-07 | 1 |
seminiferous tubule of testis | 5.06e-07 | 1 |
epithelium of male gonad | 5.06e-07 | 1 |
epithelial cord | 5.06e-07 | 1 |
sex cord | 5.06e-07 | 1 |
seminiferous tubule epithelium | 5.06e-07 | 1 |
testis sex cord | 5.06e-07 | 1 |
genital ridge | 5.06e-07 | 1 |
primitive sex cord of indifferent gonad | 5.06e-07 | 1 |
coelomic epithelium | 5.06e-07 | 1 |
heart left ventricle | 7.57e-07 | 1 |
cardiac ventricle | 7.57e-07 | 1 |
future cardiac ventricle | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 6.76e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.