FFCP PHASE1:Hg19::chr19:13171243..13171283,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:13171243..13171283,+|id=chr19:13171243..13171283,+|ontology_enrichment_celltype=CL:0000055!3.34e-21!180;CL:0000057!3.54e-13!75;CL:0002620!7.60e-11!23;CL:0000680!3.74e-07!57;CL:0000056!3.74e-07!57;CL:0000355!3.74e-07!57|ontology_enrichment_celltype_v019=CL:0002620;5.24e-11;23!CL:0002559;1.02e-09;5|ontology_enrichment_celltype_v019_2=CL:0002620,5.43e-11,23;CL:0000057,1.60e-10,76;CL:0002559,9.75e-10,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;6.14e-08;5!DOID:450;6.14e-08;5!DOID:66;6.14e-08;5!DOID:423;6.14e-08;5!DOID:0080000;6.14e-08;5!DOID:11722;6.14e-08;5|ontology_enrichment_disease_v019_2=DOID:17,4.38e-08,5;DOID:450,4.38e-08,5;DOID:66,4.38e-08,5;DOID:423,4.38e-08,5;DOID:0080000,4.38e-08,5;DOID:11722,4.38e-08,5|ontology_enrichment_uberon=UBERON:0000475!1.23e-15!365;UBERON:0000914!1.99e-11!83;UBERON:0002329!1.99e-11!83;UBERON:0003077!1.99e-11!83;UBERON:0003059!1.99e-11!83;UBERON:0007282!1.99e-11!83;UBERON:0009618!1.99e-11!83;UBERON:0007285!1.99e-11!83;UBERON:0002097!1.90e-10!40;UBERON:0005256!1.95e-10!143;UBERON:0003102!3.48e-10!95;UBERON:0002199!3.49e-10!45;UBERON:0002416!3.49e-10!45;UBERON:0004290!1.77e-09!70;UBERON:0002100!1.36e-08!216;UBERON:0000486!7.27e-08!82;UBERON:0002385!1.21e-07!63;UBERON:0001015!1.21e-07!63;UBERON:0000383!1.21e-07!63;UBERON:0001134!5.06e-07!61;UBERON:0002036!5.06e-07!61;UBERON:0003082!5.06e-07!61;UBERON:0000481!9.67e-07!347|ontology_enrichment_uberon_v019=UBERON:0002073;1.02e-09;5!UBERON:0002097;1.63e-09;41!UBERON:0002199;3.14e-07;46!UBERON:0002416;3.14e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.85e-11,41;UBERON:0002199,1.10e-10,46;UBERON:0002416,1.10e-10,46;UBERON:0002073,9.75e-10,5;UBERON:0005086,9.75e-10,5;UBERON:0003102,3.68e-07,99|phase1_expression=0.181678379270557,1.2846031433459,0.422863212287913,0,1.34088328328186,0,0,0.631719873426831,0.261185628199839,0.737201809504527,2.09340350391728,0,0,2.59909341216098,1.65698687863958,0.672325146451775,0,0,0,0.246242116153576,0.816002764977012,0.313454721478088,1.14494394852423,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,0.573673241497627,1.06400514659507,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0.70296429550139,0.936480230490962,2.2818872861778,0.597794722207204,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,0.245668634623536,1.85986406116378,0,0.247266929278557,3.64064544775211,3.59309070908119,0.168336113954066,0.250237039743928,1.10825646193673,1.75591048352335,0.612975591598039,0.45071417671979,0.113432183160021,1.79389635688862,1.49490172172997,1.27159140695737,2.10063767259082,1.75189299705346,1.28820270022815,2.60563598864226,0.506328996723799,2.24105111870757,0.757301322732344,1.10459878370759,1.93975268182574,0.355009592516614,0.302256294682921,1.01736355386293,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,4.69348596989448,1.28648187638577,2.76269842704961,7.89425477654364,24.5439023767659,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.122988438543114,0,1.20725313949488,0,0.100528972411631,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.53735113621709,0.290633938513962,1.91691339582606,0,0,0,0.144119953416961,0.37872730027914,0.253991577168676,1.52795370223311,1.17217447210047,0,0.411309970813294,1.8020583470635,0.285826432630578,0,0,0.07333828582095,1.16344544182,10.7296933755565,0,0,0,1.54324424557285,0,1.3321108950805,0.428933980974443,2.71310802695722,0,0,0.355391948742546,0,1.20575750823834,1.74306691720059,0.799783929456456,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,2.00068208423871,0,0.623912584592421,1.24900292158013,0.630809660135739,3.74852527976682,0.300946099727719,0,0,0,0.368738337083406,0.868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,0.460385919864187,0.561320188866147,0.640695746278505,3.07024349440022,0.965123526861645,0,1.07946785661859,0,1.8067974323038,2.07701771673448,0.232420756919918,0,0.40101294060657,0.0920809889358963,0.574072240823034,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,1.28225062558195,1.31205858279882,0.976135183992909,0.206082023295445,2.83865340936865,2.39277549769705,0,0,0,0,0.154048617114644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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:13171243..13171283,+ | |||
|id=chr19:13171243..13171283,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.34e-21!180;CL:0000057!3.54e-13!75;CL:0002620!7.60e-11!23;CL:0000680!3.74e-07!57;CL:0000056!3.74e-07!57;CL:0000355!3.74e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.24e-11;23!CL:0002559;1.02e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.43e-11,23;CL:0000057,1.60e-10,76;CL:0002559,9.75e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.14e-08;5!DOID:450;6.14e-08;5!DOID:66;6.14e-08;5!DOID:423;6.14e-08;5!DOID:0080000;6.14e-08;5!DOID:11722;6.14e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.38e-08,5;DOID:450,4.38e-08,5;DOID:66,4.38e-08,5;DOID:423,4.38e-08,5;DOID:0080000,4.38e-08,5;DOID:11722,4.38e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.23e-15!365;UBERON:0000914!1.99e-11!83;UBERON:0002329!1.99e-11!83;UBERON:0003077!1.99e-11!83;UBERON:0003059!1.99e-11!83;UBERON:0007282!1.99e-11!83;UBERON:0009618!1.99e-11!83;UBERON:0007285!1.99e-11!83;UBERON:0002097!1.90e-10!40;UBERON:0005256!1.95e-10!143;UBERON:0003102!3.48e-10!95;UBERON:0002199!3.49e-10!45;UBERON:0002416!3.49e-10!45;UBERON:0004290!1.77e-09!70;UBERON:0002100!1.36e-08!216;UBERON:0000486!7.27e-08!82;UBERON:0002385!1.21e-07!63;UBERON:0001015!1.21e-07!63;UBERON:0000383!1.21e-07!63;UBERON:0001134!5.06e-07!61;UBERON:0002036!5.06e-07!61;UBERON:0003082!5.06e-07!61;UBERON:0000481!9.67e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.02e-09;5!UBERON:0002097;1.63e-09;41!UBERON:0002199;3.14e-07;46!UBERON:0002416;3.14e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.85e-11,41;UBERON:0002199,1.10e-10,46;UBERON:0002416,1.10e-10,46;UBERON:0002073,9.75e-10,5;UBERON:0005086,9.75e-10,5;UBERON:0003102,3.68e-07,99 | |||
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| |||
|short_description=p@chr19:13171243..13171283,+ | |||
}} |
Revision as of 18:53, 11 September 2013
Short description: | p@chr19:13171243..13171283, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:13171243..13171283, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.43e-11 | 23 |
fibroblast | 1.60e-10 | 76 |
hair follicle cell | 9.75e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.85e-11 | 41 |
integument | 1.10e-10 | 46 |
integumental system | 1.10e-10 | 46 |
hair follicle | 9.75e-10 | 5 |
hair follicle placode | 9.75e-10 | 5 |
surface structure | 3.68e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.38e-08 | 5 |
myotonic disease | 4.38e-08 | 5 |
muscle tissue disease | 4.38e-08 | 5 |
myopathy | 4.38e-08 | 5 |
muscular disease | 4.38e-08 | 5 |
myotonic dystrophy | 4.38e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.