FFCP PHASE1:Hg19::chr1:1510749..1510760,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29101|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=25016|TSSclassifier=W|UniProt=Q9NP77|association_with_transcript=-487bp_to_NM_014188,uc001agd.2,uc001age.1,uc009vkg.1_5end|description=CAGE_peak_5_at_SSU72_5end|id=chr1:1510749..1510760,-|ontology_enrichment_celltype=CL:0000055!6.87e-10!180;CL:0000192!2.87e-08!42;CL:0000514!2.87e-08!42;CL:0000359!3.71e-08!32;CL:0000187!5.28e-08!54;CL:0000183!1.96e-07!59;CL:0000393!2.28e-07!60;CL:0000211!2.28e-07!60;CL:0000680!3.18e-07!57;CL:0000056!3.18e-07!57;CL:0000355!3.18e-07!57;CL:0002334!3.65e-07!12|ontology_enrichment_celltype_v019=CL:0002561;1.78e-15;2!CL:0002577;8.99e-11;3!CL:0000136;1.04e-09;13!CL:0002559;5.70e-07;5|ontology_enrichment_celltype_v019_2=CL:0002561,1.54e-15,2;CL:0002577,7.42e-11,3;CL:0000136,1.42e-08,15;CL:0002559,5.38e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!3.61e-07!63;UBERON:0001015!3.61e-07!63;UBERON:0000383!3.61e-07!63;UBERON:0001134!6.60e-07!61;UBERON:0002036!6.60e-07!61;UBERON:0003082!6.60e-07!61|ontology_enrichment_uberon_v019=UBERON:0005933;1.78e-15;2!UBERON:0005942;1.78e-15;2!UBERON:0005932;1.78e-15;2!UBERON:0001987;2.11e-08;4!UBERON:0002073;5.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.54e-15,2;UBERON:0005942,1.54e-15,2;UBERON:0005932,1.54e-15,2;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0002073,5.38e-07,5;UBERON:0005086,5.38e-07,5|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0.900273288253207,0,0.257640540045629,0,0.506328996723799,0,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0,1.5156378572313,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.492762936082855,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.459257792658427,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.307007349452259,0.413509717453592,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0.808729926293264,0,0.842516912477962,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0,0.563391205064483,0.143411352204052,0,0.7133421029625,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.7548292581589,0.612691153526923,0.983617892129413,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0.701139929541673,0.554805861502613,0.378806010550178,0,0.889811221596536,0.457680136793847,0.604923695052956,0.777186002913902,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0.761610424337591,0,0.363697318405119,0.322231671127465,0,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,1.36410323371586,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p5@SSU72}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=25016 | |||
|TSSclassifier=W | |||
|UniProt=Q9NP77 | |||
|association_with_transcript=-487bp_to_NM_014188,uc001agd.2,uc001age.1,uc009vkg.1_5end | |||
|description=CAGE_peak_5_at_SSU72_5end | |||
|id=chr1:1510749..1510760,- | |||
|ontology_enrichment_celltype=CL:0000055!6.87e-10!180;CL:0000192!2.87e-08!42;CL:0000514!2.87e-08!42;CL:0000359!3.71e-08!32;CL:0000187!5.28e-08!54;CL:0000183!1.96e-07!59;CL:0000393!2.28e-07!60;CL:0000211!2.28e-07!60;CL:0000680!3.18e-07!57;CL:0000056!3.18e-07!57;CL:0000355!3.18e-07!57;CL:0002334!3.65e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.78e-15;2!CL:0002577;8.99e-11;3!CL:0000136;1.04e-09;13!CL:0002559;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.54e-15,2;CL:0002577,7.42e-11,3;CL:0000136,1.42e-08,15;CL:0002559,5.38e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.61e-07!63;UBERON:0001015!3.61e-07!63;UBERON:0000383!3.61e-07!63;UBERON:0001134!6.60e-07!61;UBERON:0002036!6.60e-07!61;UBERON:0003082!6.60e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.78e-15;2!UBERON:0005942;1.78e-15;2!UBERON:0005932;1.78e-15;2!UBERON:0001987;2.11e-08;4!UBERON:0002073;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.54e-15,2;UBERON:0005942,1.54e-15,2;UBERON:0005932,1.54e-15,2;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0002073,5.38e-07,5;UBERON:0005086,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0.900273288253207,0,0.257640540045629,0,0.506328996723799,0,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0,1.5156378572313,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.492762936082855,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.459257792658427,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.307007349452259,0.413509717453592,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0.808729926293264,0,0.842516912477962,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0,0.563391205064483,0.143411352204052,0,0.7133421029625,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.7548292581589,0.612691153526923,0.983617892129413,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0.701139929541673,0.554805861502613,0.378806010550178,0,0.889811221596536,0.457680136793847,0.604923695052956,0.777186002913902,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0.761610424337591,0,0.363697318405119,0.322231671127465,0,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,1.36410323371586,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@SSU72 | |||
}} |
Revision as of 00:19, 12 September 2013
Short description: | p5@SSU72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SSU72_5end |
Coexpression cluster: | NA |
Association with transcript: | -487bp_to_NM_014188, uc001agd.2, uc001age.1, uc009vkg.1_5end |
EntrezGene: | SSU72 |
HGNC: | 25016 |
UniProt: | Q9NP77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.54e-15 | 2 |
placental epithelial cell | 7.42e-11 | 3 |
fat cell | 1.42e-08 | 15 |
hair follicle cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.54e-15 | 2 |
hair outer root sheath | 1.54e-15 | 2 |
bulb of hair follicle | 1.54e-15 | 2 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
hair follicle | 5.38e-07 | 5 |
hair follicle placode | 5.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.