FFCP PHASE1:Hg19::chr1:160492994..160493057,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114836|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21392|TSSclassifier=W|UniProt=Q5TAS6,Q96DU3,B2R8X8,B4E1U5|association_with_transcript=0bp_to_ENST00000368055,ENST00000368057,ENST00000368059,NM_001184714,NM_001184715,NM_001184716,NM_052931,uc001fwd.1,uc001fwe.1,uc009wtm.1,uc010pjh.1,uc010pji.1,uc010pjj.1_5end|coexpression_cluster_id=C57|description=CAGE_peak_1_at_SLAMF6_5end|id=chr1:160492994..160493057,-|ontology_enrichment_celltype=CL:0000738!4.21e-54!140;CL:0002087!3.75e-53!119;CL:0000037!1.77e-50!172;CL:0000566!1.77e-50!172;CL:0002032!1.82e-49!165;CL:0000837!1.82e-49!165;CL:0002031!4.15e-46!124;CL:0000988!4.99e-45!182;CL:0000542!1.28e-36!53;CL:0000051!1.28e-36!53;CL:0000838!6.94e-36!52;CL:0000766!1.12e-18!76;CL:0000945!1.15e-17!24;CL:0000826!1.15e-17!24;CL:0000763!5.35e-17!112;CL:0000049!5.35e-17!112;CL:0000084!7.36e-17!25;CL:0000827!7.36e-17!25;CL:0000791!1.58e-16!18;CL:0000789!1.58e-16!18;CL:0002420!1.58e-16!18;CL:0002419!1.58e-16!18;CL:0000790!1.58e-16!18;CL:0002194!5.90e-16!63;CL:0000576!5.90e-16!63;CL:0000040!5.90e-16!63;CL:0000559!5.90e-16!63;CL:0002009!5.67e-15!65;CL:0000557!6.23e-15!71;CL:0000839!1.43e-14!70;CL:0000236!4.73e-12!14;CL:0002057!2.34e-11!42;CL:0000625!2.63e-11!11;CL:0000860!6.69e-10!45;CL:0000134!1.29e-07!358;CL:0002320!7.26e-07!365|ontology_enrichment_celltype_v019=CL:0000542;8.77e-27;53!CL:0000945;2.96e-22;24!CL:0000791;1.53e-21;18!CL:0000789;1.53e-21;18!CL:0002419;1.53e-21;18!CL:0000084;7.30e-21;25!CL:0000236;1.34e-14;13!CL:0000625;1.44e-14;11!CL:0002087;5.16e-12;104!CL:0000738;2.32e-09;136!CL:0000624;1.02e-07;6!CL:0000988;8.96e-07;177|ontology_enrichment_celltype_v019_2=CL:0000542,2.03e-46,53;CL:0000051,2.03e-46,53;CL:0000838,1.94e-45,52;CL:0000738,2.04e-44,136;CL:0002087,2.92e-43,115;CL:0000037,1.23e-39,168;CL:0002032,7.17e-38,161;CL:0000837,7.17e-38,161;CL:0000988,4.81e-36,177;CL:0002031,8.96e-35,120;CL:0000945,2.91e-22,24;CL:0000826,2.91e-22,24;CL:0000791,1.61e-21,18;CL:0000789,1.61e-21,18;CL:0002420,1.61e-21,18;CL:0002419,1.61e-21,18;CL:0000790,1.61e-21,18;CL:0000084,7.58e-21,25;CL:0000827,7.58e-21,25;CL:0000236,8.64e-16,14;CL:0000625,1.49e-14,11;CL:0000624,1.04e-07,6;CL:0000766,2.65e-07,72;CL:0000763,8.55e-07,108;CL:0000049,8.55e-07,108|ontology_enrichment_development_v019=CL:0000051;8.77e-27;53!CL:0000790;1.53e-21;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.24e-21!115;UBERON:0002390!2.82e-21!102;UBERON:0003061!2.82e-21!102;UBERON:0002193!3.28e-19!112;UBERON:0002371!1.91e-11!80;UBERON:0002405!1.49e-10!115;UBERON:0001474!1.33e-09!86;UBERON:0000178!5.45e-08!15;UBERON:0000179!5.45e-08!15;UBERON:0000463!5.45e-08!15;UBERON:0004765!2.56e-07!101;UBERON:0001434!2.56e-07!101;UBERON:0004177!9.68e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-10;15!UBERON:0000179;1.06e-10;15!UBERON:0000463;1.06e-10;15!UBERON:0002390;8.90e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.28e-12,98;UBERON:0003061,7.28e-12,98;UBERON:0002193,3.61e-11,108;UBERON:0000178,1.07e-10,15;UBERON:0000179,1.07e-10,15;UBERON:0000463,1.07e-10,15;UBERON:0007023,2.47e-10,114;UBERON:0004177,1.78e-08,7;UBERON:0005057,1.78e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.4664115501643,50.7381642800665,58.9543752039458,11.8009283054671,21.8782756915411,6.65709330259127,0,0,0,116.820538475095,49.4748929056227,0,9.97191735357379,6.21687787157439,7.81239134577067,22.3915474239924,36.9238779261637,14.9393829227828,1.30858414901608,0.755751887377619,0.485168122375632,0.464858073811369,1.6446715520873,0,0.863077176966451,1.2808035326455,0.709446689665756,0.344745680736619,1.29096936716765,0,0.752969358170419,0.545812300115692,0.898893937780338,0.306083892370903,1.60464513538047,0,1.31940520074686,1.39624560335142,0.852449501065388,0.290209238628584,3.40431134814684,0,0.251248665256743,0.521482918420201,0.65156653411535,3.02699751316684,1.10483290796269,0.949387162322653,1.05627643155971,0.850417199860174,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0.99458338599545,0.365328307529268,135.517108235218,131.619405314174,121.862767779307,114.363699647824,146.544931255181,127.595041669895,118.988077101275,113.532396789708,65.4594914475866,32.8852826047726,46.2550606031527,2.64342657158052,3.36305137788922,0.526768169550154,28.9163362067335,25.1526888159465,37.2138713189112,41.7966238476695,35.1996047964278,41.6634069046565,25.3274746930285,78.5443721040474,60.3942110323416,82.6321426796907,99.9266257292907,43.0386834278269,47.4716618593556,38.4784696772602,44.2160028457357,47.8175091462837,51.603723980397,36.1180117921113,42.8595647600405,66.0593467926811,82.0091856308111,94.1539200622406,126.256826317732,93.6582318112844,112.63743751716,152.07232711174,77.546186325053,91.1264671419459,108.689732100541,115.073744493392,103.462127612052,58.0627420487229,34.4997852560724,28.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21392 | |||
|TSSclassifier=W | |||
|UniProt=Q5TAS6,Q96DU3,B2R8X8,B4E1U5 | |||
|association_with_transcript=0bp_to_ENST00000368055,ENST00000368057,ENST00000368059,NM_001184714,NM_001184715,NM_001184716,NM_052931,uc001fwd.1,uc001fwe.1,uc009wtm.1,uc010pjh.1,uc010pji.1,uc010pjj.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_SLAMF6_5end | |||
|id=chr1:160492994..160493057,- | |||
|ontology_enrichment_celltype=CL:0000738!4.21e-54!140;CL:0002087!3.75e-53!119;CL:0000037!1.77e-50!172;CL:0000566!1.77e-50!172;CL:0002032!1.82e-49!165;CL:0000837!1.82e-49!165;CL:0002031!4.15e-46!124;CL:0000988!4.99e-45!182;CL:0000542!1.28e-36!53;CL:0000051!1.28e-36!53;CL:0000838!6.94e-36!52;CL:0000766!1.12e-18!76;CL:0000945!1.15e-17!24;CL:0000826!1.15e-17!24;CL:0000763!5.35e-17!112;CL:0000049!5.35e-17!112;CL:0000084!7.36e-17!25;CL:0000827!7.36e-17!25;CL:0000791!1.58e-16!18;CL:0000789!1.58e-16!18;CL:0002420!1.58e-16!18;CL:0002419!1.58e-16!18;CL:0000790!1.58e-16!18;CL:0002194!5.90e-16!63;CL:0000576!5.90e-16!63;CL:0000040!5.90e-16!63;CL:0000559!5.90e-16!63;CL:0002009!5.67e-15!65;CL:0000557!6.23e-15!71;CL:0000839!1.43e-14!70;CL:0000236!4.73e-12!14;CL:0002057!2.34e-11!42;CL:0000625!2.63e-11!11;CL:0000860!6.69e-10!45;CL:0000134!1.29e-07!358;CL:0002320!7.26e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.77e-27;53!CL:0000945;2.96e-22;24!CL:0000791;1.53e-21;18!CL:0000789;1.53e-21;18!CL:0002419;1.53e-21;18!CL:0000084;7.30e-21;25!CL:0000236;1.34e-14;13!CL:0000625;1.44e-14;11!CL:0002087;5.16e-12;104!CL:0000738;2.32e-09;136!CL:0000624;1.02e-07;6!CL:0000988;8.96e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.03e-46,53;CL:0000051,2.03e-46,53;CL:0000838,1.94e-45,52;CL:0000738,2.04e-44,136;CL:0002087,2.92e-43,115;CL:0000037,1.23e-39,168;CL:0002032,7.17e-38,161;CL:0000837,7.17e-38,161;CL:0000988,4.81e-36,177;CL:0002031,8.96e-35,120;CL:0000945,2.91e-22,24;CL:0000826,2.91e-22,24;CL:0000791,1.61e-21,18;CL:0000789,1.61e-21,18;CL:0002420,1.61e-21,18;CL:0002419,1.61e-21,18;CL:0000790,1.61e-21,18;CL:0000084,7.58e-21,25;CL:0000827,7.58e-21,25;CL:0000236,8.64e-16,14;CL:0000625,1.49e-14,11;CL:0000624,1.04e-07,6;CL:0000766,2.65e-07,72;CL:0000763,8.55e-07,108;CL:0000049,8.55e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;8.77e-27;53!CL:0000790;1.53e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-21!115;UBERON:0002390!2.82e-21!102;UBERON:0003061!2.82e-21!102;UBERON:0002193!3.28e-19!112;UBERON:0002371!1.91e-11!80;UBERON:0002405!1.49e-10!115;UBERON:0001474!1.33e-09!86;UBERON:0000178!5.45e-08!15;UBERON:0000179!5.45e-08!15;UBERON:0000463!5.45e-08!15;UBERON:0004765!2.56e-07!101;UBERON:0001434!2.56e-07!101;UBERON:0004177!9.68e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-10;15!UBERON:0000179;1.06e-10;15!UBERON:0000463;1.06e-10;15!UBERON:0002390;8.90e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.28e-12,98;UBERON:0003061,7.28e-12,98;UBERON:0002193,3.61e-11,108;UBERON:0000178,1.07e-10,15;UBERON:0000179,1.07e-10,15;UBERON:0000463,1.07e-10,15;UBERON:0007023,2.47e-10,114;UBERON:0004177,1.78e-08,7;UBERON:0005057,1.78e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.4664115501643,50.7381642800665,58.9543752039458,11.8009283054671,21.8782756915411,6.65709330259127,0,0,0,116.820538475095,49.4748929056227,0,9.97191735357379,6.21687787157439,7.81239134577067,22.3915474239924,36.9238779261637,14.9393829227828,1.30858414901608,0.755751887377619,0.485168122375632,0.464858073811369,1.6446715520873,0,0.863077176966451,1.2808035326455,0.709446689665756,0.344745680736619,1.29096936716765,0,0.752969358170419,0.545812300115692,0.898893937780338,0.306083892370903,1.60464513538047,0,1.31940520074686,1.39624560335142,0.852449501065388,0.290209238628584,3.40431134814684,0,0.251248665256743,0.521482918420201,0.65156653411535,3.02699751316684,1.10483290796269,0.949387162322653,1.05627643155971,0.850417199860174,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0.99458338599545,0.365328307529268,135.517108235218,131.619405314174,121.862767779307,114.363699647824,146.544931255181,127.595041669895,118.988077101275,113.532396789708,65.4594914475866,32.8852826047726,46.2550606031527,2.64342657158052,3.36305137788922,0.526768169550154,28.9163362067335,25.1526888159465,37.2138713189112,41.7966238476695,35.1996047964278,41.6634069046565,25.3274746930285,78.5443721040474,60.3942110323416,82.6321426796907,99.9266257292907,43.0386834278269,47.4716618593556,38.4784696772602,44.2160028457357,47.8175091462837,51.603723980397,36.1180117921113,42.8595647600405,66.0593467926811,82.0091856308111,94.1539200622406,126.256826317732,93.6582318112844,112.63743751716,152.07232711174,77.546186325053,91.1264671419459,108.689732100541,115.073744493392,103.462127612052,58.0627420487229,34.4997852560724,28.6752319687942,0,0,0,0,0,0,0,0,0,0,0.351339142772504,1.57174890597255,0,0,0.97364218096405,1.21890816109487,2.6591592103773,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1595305478658,30.4205544681009,23.3350924793303,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,10.9461402577071,3.51579964002488,10.5416969741516,0,0,0,0,0,0,23.9862208146148,62.261720223809,29.5409777557539,31.7007299610978,0,0,0,0,0.637938751653163,4.49404214368309,14.9580729602012,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5904861388785,18.9828496720383,36.6075523265814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,2.01090682660736,0,3.48332062874083,0,0,0,0,43.6404943939666,46.6428696356849,58.1040130917646,81.7134989820216,71.1656732439116,33.0721388708286,52.3830494120971,56.3118875168932,0,0,0,26.3840508678521,0,0,16.7397586365263,14.5692941145956,1.53204296105893,0,0,1.40398589056729,0.228234679033192,0.47003968731907,0,28.9488940040742,0,0,0,0,1.22896305723383,2.68411329470899,2.16903884225481,0,0,2.46174797895425,0.540911356951966,0,0,0.18714054040822,6.88588442577902,0,0.780103689942349,0,2.14870036263921,0.296964680832639,0,0,0.281338832821026,0,0,0,1.79323189425963,39.5085999209541,0,0,88.1287207101257,0,0,0,0,5.32674390439441,69.4500967806125,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,2.00070672109872,0,0,0,0,7.97502899329799,3.57230614267263,17.5901476086149,33.723788404593,0.156980256395025,5.318773820805,0,0.19606253431774,0.503464760927528,0,1.58936578980379,0,0,0,0,4.97630965539252,7.16506272477047,4.27721101453538,0,0,0,0.539209063845416,0,0,54.9188915539155,0.19566461893209,0,0.789168805698781,4.83962864194656,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,4.36450574197887,0,0.225980740780532,0,0,0,0,0,5.54977786322317,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,3.41753560563109,1.95497680890578,0.687481272035051,0,0.399358000997982,0,0.89268582976749,0.671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,3.30983970656632,0.209818352539992,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,22.4933506853189,0,0,1.46552233678082,2.65013777824443,0.258565912723101,0.52893040697076,0,0,10.5719538442018,3.30129040709298,7.45630299624952,89.8060499479631,0,56.9989360422593,0,0,0.7520696820681,0.306345576763462,0,0,0,0.366078794705889,0.250381861413,0.573409195690071,1.66393577305278,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,2.72804432375144,1.59437808376036,0,0,0,0,17.198916043524,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0,0.807378228159255,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,0,8.22386650285773,0,0,0,0,0,0,1.13831095675649,2.66107110487917,82.2770671148264,0,0.203909198930495,0.0657727735628491,0,0,2.51177897121645,0.471346769748006,0,0,0,0,2.50167904618297,0,0,0,0,0,0,0,3.01159151174194,0,0,1.69354820076372,0,0,0,0,0,0,0,1.02662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,8.33480907565802,2.62271472604749,0,0.735444965261716,0,0.588925401344836,2.0793248022896,0.4226557275834,0,46.240087646088,15.7921825535264,77.6542781536698,0,0,0,0,10.0920442348999,1.00337708206016,0,0,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0.267964130156178,0,0.413731983447581,5.5440835294255,1.90451545170992,17.2452389262136,22.8434948608757,0,1.78212043178862,0.404234377916439,1.52401723527873,0.684466602170562,48.7628863825614,4.94883217209467,0.332660356546013,0,0,0,0,0,1.4668973301944,0,1.33151354837103,42.6700442412976,81.7449655373244 | |||
|short_description=p1@SLAMF6 | |||
}} |
Revision as of 01:15, 12 September 2013
Short description: | p1@SLAMF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLAMF6_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000368055, ENST00000368057, ENST00000368059, NM_001184714, NM_001184715, NM_001184716, NM_052931, uc001fwd.1, uc001fwe.1, uc009wtm.1, uc010pjh.1, uc010pji.1, uc010pjj.1_5end |
EntrezGene: | SLAMF6 |
HGNC: | 21392 |
UniProt: | Q5TAS6Q96DU3B2R8X8B4E1U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.03e-46 | 53 |
common lymphoid progenitor | 2.03e-46 | 53 |
lymphoid lineage restricted progenitor cell | 1.94e-45 | 52 |
leukocyte | 2.04e-44 | 136 |
nongranular leukocyte | 2.92e-43 | 115 |
hematopoietic stem cell | 1.23e-39 | 168 |
hematopoietic oligopotent progenitor cell | 7.17e-38 | 161 |
hematopoietic multipotent progenitor cell | 7.17e-38 | 161 |
hematopoietic cell | 4.81e-36 | 177 |
hematopoietic lineage restricted progenitor cell | 8.96e-35 | 120 |
lymphocyte of B lineage | 2.91e-22 | 24 |
pro-B cell | 2.91e-22 | 24 |
mature alpha-beta T cell | 1.61e-21 | 18 |
alpha-beta T cell | 1.61e-21 | 18 |
immature T cell | 1.61e-21 | 18 |
mature T cell | 1.61e-21 | 18 |
immature alpha-beta T cell | 1.61e-21 | 18 |
T cell | 7.58e-21 | 25 |
pro-T cell | 7.58e-21 | 25 |
B cell | 8.64e-16 | 14 |
CD8-positive, alpha-beta T cell | 1.49e-14 | 11 |
CD4-positive, alpha-beta T cell | 1.04e-07 | 6 |
myeloid leukocyte | 2.65e-07 | 72 |
myeloid cell | 8.55e-07 | 108 |
common myeloid progenitor | 8.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.28e-12 | 98 |
blood island | 7.28e-12 | 98 |
hemolymphoid system | 3.61e-11 | 108 |
blood | 1.07e-10 | 15 |
haemolymphatic fluid | 1.07e-10 | 15 |
organism substance | 1.07e-10 | 15 |
adult organism | 2.47e-10 | 114 |
hemopoietic organ | 1.78e-08 | 7 |
immune organ | 1.78e-08 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.