FFCP PHASE1:Hg19::chr1:89358212..89358217,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:89358212..89358217,-|id=chr1:89358212..89358217,-|ontology_enrichment_celltype=CL:0000066!1.35e-07!254|ontology_enrichment_celltype_v019=CL:0002127;5.51e-09;1!CL:0000911;5.51e-09;1!CL:0000319;5.51e-09;1!CL:0000814;5.51e-09;1!CL:0000083;8.33e-09;4|ontology_enrichment_celltype_v019_2=CL:0000083,5.99e-09,4;CL:0002127,7.27e-09,1;CL:0000914,7.27e-09,1;CL:0000911,7.27e-09,1;CL:0000814,7.27e-09,1;CL:0002042,7.27e-09,1;CL:0002039,7.27e-09,1;CL:0002040,7.27e-09,1;CL:0002041,7.27e-09,1;CL:0000319,7.85e-09,1;CL:0000066,1.35e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.35e-39!106;DOID:0050687!1.01e-35!143;DOID:162!4.84e-33!235;DOID:14566!1.42e-32!239;DOID:0050686!2.20e-12!137;DOID:299!1.36e-10!25;DOID:3119!2.70e-09!14;DOID:0050615!1.64e-08!16;DOID:1324!1.60e-07!15|ontology_enrichment_disease_v019=DOID:4074;1.04e-16;2!DOID:4905;1.04e-16;2!DOID:3498;1.04e-16;2!DOID:1749;9.09e-14;14!DOID:3119;4.57e-09;14!DOID:3111;5.51e-09;1!DOID:3030;5.51e-09;1!DOID:3603;5.51e-09;1!DOID:1793;8.33e-09;4!DOID:299;1.75e-07;25!DOID:0050687;2.37e-07;143!DOID:305;2.37e-07;106|ontology_enrichment_disease_v019_2=DOID:305,5.67e-23,106;DOID:0050687,4.04e-18,143;DOID:4074,5.32e-17,2;DOID:4905,5.32e-17,2;DOID:3498,5.32e-17,2;DOID:1749,8.76e-14,14;DOID:162,1.73e-13,235;DOID:14566,3.98e-13,239;DOID:3119,3.87e-09,14;DOID:1793,5.99e-09,4;DOID:3111,6.22e-09,1;DOID:3603,6.22e-09,1;DOID:3030,7.85e-09,1;DOID:299,1.87e-07,25|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000997;5.51e-09;1!UBERON:0001282;5.51e-09;1!UBERON:0005056;5.51e-09;1!UBERON:0009842;5.51e-09;1!UBERON:0003704;5.51e-09;1!UBERON:0004176;5.51e-09;1!UBERON:0001171;5.51e-09;1!UBERON:0001172;5.51e-09;1!UBERON:0003343;9.00e-09;4!UBERON:0004785;9.00e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.60e-09,1;UBERON:0005056,2.60e-09,1;UBERON:0001282,3.58e-09,1;UBERON:0009842,3.58e-09,1;UBERON:0003704,3.58e-09,1;UBERON:0001171,3.58e-09,1;UBERON:0001172,3.58e-09,1;UBERON:0003343,1.21e-08,4;UBERON:0004785,1.21e-08,4;UBERON:0000974,2.01e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0.709446689665756,0,0,0,0,0.272906150057846,0.449446968890169,0,0.641858054152187,0,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,1.03088233644789,0,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.116193942869518,0.932949495138334,0.504641701751257,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0.846694330895531,0,0.280797178113459,0,0,0,0,0,0,0,0.687010689511529,0,0.223676107892416,0.333698283423817,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0.242721043499027,4.79206552393157,0.284136146806413,0.71623345421307,0,0,0,0.140669416410513,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,1.37897349296586,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0.544692317594951,0.41827123283581,0,1.59518878185802,0.46112780877612,0.807818799687949,0.217294743844016,1.27600463892768,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0,1.11255605286265,0.421996129056054,0.652931232636591,0.282706142867882,1.51472047819464,0,0,0,0,0,0,0,0,0,0.729819156862664,1.9566461893209,3.3989253134773,0,0,0,0.126373159256976,0.450970258243478,0,0,0,0,0,1.13843818411917,0,0,1.95984794828755,0,0,0.343972064943233,0.774050650312681,1.24251839046515,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:89358212..89358217,- | |||
|id=chr1:89358212..89358217,- | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.51e-09;1!CL:0000911;5.51e-09;1!CL:0000319;5.51e-09;1!CL:0000814;5.51e-09;1!CL:0000083;8.33e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,5.99e-09,4;CL:0002127,7.27e-09,1;CL:0000914,7.27e-09,1;CL:0000911,7.27e-09,1;CL:0000814,7.27e-09,1;CL:0002042,7.27e-09,1;CL:0002039,7.27e-09,1;CL:0002040,7.27e-09,1;CL:0002041,7.27e-09,1;CL:0000319,7.85e-09,1;CL:0000066,1.35e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.35e-39!106;DOID:0050687!1.01e-35!143;DOID:162!4.84e-33!235;DOID:14566!1.42e-32!239;DOID:0050686!2.20e-12!137;DOID:299!1.36e-10!25;DOID:3119!2.70e-09!14;DOID:0050615!1.64e-08!16;DOID:1324!1.60e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.04e-16;2!DOID:4905;1.04e-16;2!DOID:3498;1.04e-16;2!DOID:1749;9.09e-14;14!DOID:3119;4.57e-09;14!DOID:3111;5.51e-09;1!DOID:3030;5.51e-09;1!DOID:3603;5.51e-09;1!DOID:1793;8.33e-09;4!DOID:299;1.75e-07;25!DOID:0050687;2.37e-07;143!DOID:305;2.37e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.67e-23,106;DOID:0050687,4.04e-18,143;DOID:4074,5.32e-17,2;DOID:4905,5.32e-17,2;DOID:3498,5.32e-17,2;DOID:1749,8.76e-14,14;DOID:162,1.73e-13,235;DOID:14566,3.98e-13,239;DOID:3119,3.87e-09,14;DOID:1793,5.99e-09,4;DOID:3111,6.22e-09,1;DOID:3603,6.22e-09,1;DOID:3030,7.85e-09,1;DOID:299,1.87e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.51e-09;1!UBERON:0001282;5.51e-09;1!UBERON:0005056;5.51e-09;1!UBERON:0009842;5.51e-09;1!UBERON:0003704;5.51e-09;1!UBERON:0004176;5.51e-09;1!UBERON:0001171;5.51e-09;1!UBERON:0001172;5.51e-09;1!UBERON:0003343;9.00e-09;4!UBERON:0004785;9.00e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.60e-09,1;UBERON:0005056,2.60e-09,1;UBERON:0001282,3.58e-09,1;UBERON:0009842,3.58e-09,1;UBERON:0003704,3.58e-09,1;UBERON:0001171,3.58e-09,1;UBERON:0001172,3.58e-09,1;UBERON:0003343,1.21e-08,4;UBERON:0004785,1.21e-08,4;UBERON:0000974,2.01e-07,10 | |||
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|short_description=p@chr1:89358212..89358217,- | |||
}} |
Revision as of 07:04, 12 September 2013
Short description: | p@chr1:89358212..89358217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89358212..89358217, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 5.99e-09 | 4 |
innate effector T cell | 7.27e-09 | 1 |
immature NK T cell | 7.27e-09 | 1 |
effector T cell | 7.27e-09 | 1 |
mature NK T cell | 7.27e-09 | 1 |
immature NK T cell stage IV | 7.27e-09 | 1 |
immature NK T cell stage I | 7.27e-09 | 1 |
immature NK T cell stage II | 7.27e-09 | 1 |
immature NK T cell stage III | 7.27e-09 | 1 |
mucus secreting cell | 7.85e-09 | 1 |
epithelial cell | 1.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.60e-09 | 1 |
external female genitalia | 2.60e-09 | 1 |
intralobular bile duct | 3.58e-09 | 1 |
acinus | 3.58e-09 | 1 |
intrahepatic bile duct | 3.58e-09 | 1 |
portal lobule | 3.58e-09 | 1 |
hepatic acinus | 3.58e-09 | 1 |
mucosa of oral region | 1.21e-08 | 4 |
respiratory system mucosa | 1.21e-08 | 4 |
neck | 2.01e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.67e-23 | 106 |
cell type cancer | 4.04e-18 | 143 |
pancreas adenocarcinoma | 5.32e-17 | 2 |
pancreatic carcinoma | 5.32e-17 | 2 |
pancreatic ductal adenocarcinoma | 5.32e-17 | 2 |
squamous cell carcinoma | 8.76e-14 | 14 |
cancer | 1.73e-13 | 235 |
disease of cellular proliferation | 3.98e-13 | 239 |
gastrointestinal system cancer | 3.87e-09 | 14 |
pancreatic cancer | 5.99e-09 | 4 |
cystadenocarcinoma | 6.22e-09 | 1 |
mucinous cystadenocarcinoma | 6.22e-09 | 1 |
mucinous adenocarcinoma | 7.85e-09 | 1 |
adenocarcinoma | 1.87e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.