FFCP PHASE1:Hg19::chr1:89736434..89736439,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115362|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19895|TSSclassifier=W|UniProt=Q96PP8|association_with_transcript=106bp_to_ENST00000370459_5end|coexpression_cluster_id=C7|description=CAGE_peak_5_at_GBP5_5end|id=chr1:89736434..89736439,-|ontology_enrichment_celltype=CL:0000738!6.27e-38!140;CL:0002087!6.77e-37!119;CL:0000037!6.28e-34!172;CL:0000566!6.28e-34!172;CL:0002032!1.81e-31!165;CL:0000837!1.81e-31!165;CL:0000988!3.11e-31!182;CL:0002057!8.73e-31!42;CL:0002031!6.79e-30!124;CL:0000860!3.06e-28!45;CL:0000766!1.35e-24!76;CL:0000791!4.72e-24!18;CL:0000789!4.72e-24!18;CL:0002420!4.72e-24!18;CL:0002419!4.72e-24!18;CL:0000790!4.72e-24!18;CL:0002194!6.18e-21!63;CL:0000576!6.18e-21!63;CL:0000040!6.18e-21!63;CL:0000559!6.18e-21!63;CL:0002009!4.54e-20!65;CL:0000084!6.04e-19!25;CL:0000827!6.04e-19!25;CL:0000763!9.72e-19!112;CL:0000049!9.72e-19!112;CL:0000839!4.01e-18!70;CL:0000557!9.10e-18!71;CL:0000624!1.80e-14!6;CL:0000838!2.74e-12!52;CL:0000542!5.79e-12!53;CL:0000051!5.79e-12!53;CL:0000625!1.51e-10!11;CL:0000134!9.18e-09!358;CL:0000775!1.38e-08!3;CL:0002393!1.73e-08!9;CL:0002397!1.73e-08!9;CL:0002320!2.45e-08!365;CL:0000094!3.87e-08!8;CL:0000623!4.55e-08!3;CL:0000825!4.55e-08!3;CL:0000898!6.54e-08!3;CL:0000842!8.52e-08!3;CL:0000219!7.39e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.29e-22;33!CL:0002057;1.29e-22;33!CL:0000473;6.82e-17;39!CL:0000234;6.82e-17;39!CL:0000576;7.69e-13;48!CL:0000623;3.31e-10;3!CL:0000084;1.65e-09;25!CL:0000791;1.73e-09;18!CL:0000789;1.73e-09;18!CL:0002419;1.73e-09;18!CL:0000094;1.11e-08;8!CL:0002087;3.68e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,2.55e-21,136;CL:0002032,2.71e-19,161;CL:0000837,2.71e-19,161;CL:0000860,2.76e-19,42;CL:0002057,2.76e-19,42;CL:0002087,1.05e-18,115;CL:0000037,2.54e-18,168;CL:0002031,8.80e-18,120;CL:0000988,3.50e-17,177;CL:0000766,5.55e-17,72;CL:0000473,1.25e-16,48;CL:0000234,1.25e-16,48;CL:0002194,6.52e-13,59;CL:0000576,6.52e-13,59;CL:0000040,6.52e-13,59;CL:0000559,6.52e-13,59;CL:0002009,1.97e-12,61;CL:0000763,3.40e-12,108;CL:0000049,3.40e-12,108;CL:0000839,2.33e-11,66;CL:0000557,3.66e-11,67;CL:0000623,4.00e-10,3;CL:0000825,4.00e-10,3;CL:0000791,1.47e-09,18;CL:0000789,1.47e-09,18;CL:0002420,1.47e-09,18;CL:0002419,1.47e-09,18;CL:0000790,1.47e-09,18;CL:0000084,1.50e-09,25;CL:0000827,1.50e-09,25;CL:0000094,1.21e-08,8;CL:0000838,1.89e-07,52;CL:0000542,2.73e-07,53;CL:0000051,2.73e-07,53|ontology_enrichment_development_v019=CL:0002057;5.50e-16;42!CL:0000790;1.73e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;2.84e-08;1!DOID:0060061;2.84e-08;1!DOID:8691;2.84e-08;1|ontology_enrichment_disease_v019_2=DOID:0060060,3.53e-08,1;DOID:0060061,3.53e-08,1;DOID:8691,3.53e-08,1|ontology_enrichment_uberon=UBERON:0002390!1.54e-19!102;UBERON:0003061!1.54e-19!102;UBERON:0002193!5.75e-17!112;UBERON:0002371!5.70e-15!80;UBERON:0001474!1.94e-13!86;UBERON:0002405!6.30e-11!115;UBERON:0004765!1.97e-10!101;UBERON:0001434!1.97e-10!101;UBERON:0002384!9.24e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-09,76;UBERON:0001474,8.54e-09,82;UBERON:0004765,7.48e-08,90;UBERON:0002405,1.53e-07,93;UBERON:0002390,4.60e-07,98;UBERON:0003061,4.60e-07,98;UBERON:0001434,6.92e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0.411167888021826,0,12.6584652621746,7.68482119587302,7.33094912654614,0.344745680736619,0,0,0.188242339542605,0,0,0.918251677112708,0,0,6.26717470354761,8.7764009353518,9.37694451171927,4.93355705668593,0.56738522469114,0,11.5574386018102,14.0800387973454,4.34377689410233,1.21079900526674,0,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.600707571366025,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.96505381374582,0.822405995998037,0.334372990781356,0.32592226663359,1.89379122293893,0,0.222820913770347,1.76763544484902,2.43687284041983,3.24964636518019,0.512365278902701,0.520237390239513,0.822189523018381,0.276350017785848,0.289803085735052,0.444859689486181,0.267540828089713,2.09071047609954,0.113309342697566,0.383220493601921,0.68725489096526,2.78321661221453,0.95569624297229,0,0,0,0.639933055772092,0,0.473554504088034,0.821127996921047,1.81446068902259,1.33720097891754,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,1.07813787429759,1.54011643535698,0,0,0,0,0,0.7490070239471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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19895 | |||
|TSSclassifier=W | |||
|UniProt=Q96PP8 | |||
|association_with_transcript=106bp_to_ENST00000370459_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_GBP5_5end | |||
|id=chr1:89736434..89736439,- | |||
|ontology_enrichment_celltype=CL:0000738!6.27e-38!140;CL:0002087!6.77e-37!119;CL:0000037!6.28e-34!172;CL:0000566!6.28e-34!172;CL:0002032!1.81e-31!165;CL:0000837!1.81e-31!165;CL:0000988!3.11e-31!182;CL:0002057!8.73e-31!42;CL:0002031!6.79e-30!124;CL:0000860!3.06e-28!45;CL:0000766!1.35e-24!76;CL:0000791!4.72e-24!18;CL:0000789!4.72e-24!18;CL:0002420!4.72e-24!18;CL:0002419!4.72e-24!18;CL:0000790!4.72e-24!18;CL:0002194!6.18e-21!63;CL:0000576!6.18e-21!63;CL:0000040!6.18e-21!63;CL:0000559!6.18e-21!63;CL:0002009!4.54e-20!65;CL:0000084!6.04e-19!25;CL:0000827!6.04e-19!25;CL:0000763!9.72e-19!112;CL:0000049!9.72e-19!112;CL:0000839!4.01e-18!70;CL:0000557!9.10e-18!71;CL:0000624!1.80e-14!6;CL:0000838!2.74e-12!52;CL:0000542!5.79e-12!53;CL:0000051!5.79e-12!53;CL:0000625!1.51e-10!11;CL:0000134!9.18e-09!358;CL:0000775!1.38e-08!3;CL:0002393!1.73e-08!9;CL:0002397!1.73e-08!9;CL:0002320!2.45e-08!365;CL:0000094!3.87e-08!8;CL:0000623!4.55e-08!3;CL:0000825!4.55e-08!3;CL:0000898!6.54e-08!3;CL:0000842!8.52e-08!3;CL:0000219!7.39e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-22;33!CL:0002057;1.29e-22;33!CL:0000473;6.82e-17;39!CL:0000234;6.82e-17;39!CL:0000576;7.69e-13;48!CL:0000623;3.31e-10;3!CL:0000084;1.65e-09;25!CL:0000791;1.73e-09;18!CL:0000789;1.73e-09;18!CL:0002419;1.73e-09;18!CL:0000094;1.11e-08;8!CL:0002087;3.68e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.55e-21,136;CL:0002032,2.71e-19,161;CL:0000837,2.71e-19,161;CL:0000860,2.76e-19,42;CL:0002057,2.76e-19,42;CL:0002087,1.05e-18,115;CL:0000037,2.54e-18,168;CL:0002031,8.80e-18,120;CL:0000988,3.50e-17,177;CL:0000766,5.55e-17,72;CL:0000473,1.25e-16,48;CL:0000234,1.25e-16,48;CL:0002194,6.52e-13,59;CL:0000576,6.52e-13,59;CL:0000040,6.52e-13,59;CL:0000559,6.52e-13,59;CL:0002009,1.97e-12,61;CL:0000763,3.40e-12,108;CL:0000049,3.40e-12,108;CL:0000839,2.33e-11,66;CL:0000557,3.66e-11,67;CL:0000623,4.00e-10,3;CL:0000825,4.00e-10,3;CL:0000791,1.47e-09,18;CL:0000789,1.47e-09,18;CL:0002420,1.47e-09,18;CL:0002419,1.47e-09,18;CL:0000790,1.47e-09,18;CL:0000084,1.50e-09,25;CL:0000827,1.50e-09,25;CL:0000094,1.21e-08,8;CL:0000838,1.89e-07,52;CL:0000542,2.73e-07,53;CL:0000051,2.73e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.50e-16;42!CL:0000790;1.73e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.84e-08;1!DOID:0060061;2.84e-08;1!DOID:8691;2.84e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.53e-08,1;DOID:0060061,3.53e-08,1;DOID:8691,3.53e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-19!102;UBERON:0003061!1.54e-19!102;UBERON:0002193!5.75e-17!112;UBERON:0002371!5.70e-15!80;UBERON:0001474!1.94e-13!86;UBERON:0002405!6.30e-11!115;UBERON:0004765!1.97e-10!101;UBERON:0001434!1.97e-10!101;UBERON:0002384!9.24e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-09,76;UBERON:0001474,8.54e-09,82;UBERON:0004765,7.48e-08,90;UBERON:0002405,1.53e-07,93;UBERON:0002390,4.60e-07,98;UBERON:0003061,4.60e-07,98;UBERON:0001434,6.92e-07,100 | |||
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|short_description=p5@GBP5 | |||
}} |
Revision as of 07:06, 12 September 2013
Short description: | p5@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GBP5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 106bp_to_ENST00000370459_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | Q96PP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-09 | 76 |
bone element | 8.54e-09 | 82 |
skeletal element | 7.48e-08 | 90 |
immune system | 1.53e-07 | 93 |
hematopoietic system | 4.60e-07 | 98 |
blood island | 4.60e-07 | 98 |
skeletal system | 6.92e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.53e-08 | 1 |
cutaneous T cell lymphoma | 3.53e-08 | 1 |
mycosis fungoides | 3.53e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.