FFCP PHASE1:Hg19::chr2:102091478..102091490,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=731220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=37253|TSSclassifier=W|UniProt=Q6ZV50,E9PDA6|association_with_transcript=-313bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end|description=CAGE_peak_3_at_RFX8_5end|id=chr2:102091478..102091490,-|ontology_enrichment_celltype=CL:0000048!3.57e-29!430;CL:0000723!3.36e-28!436;CL:0000034!6.04e-27!444;CL:0000055!4.12e-22!180;CL:0002620!1.11e-19!23;CL:0000134!3.47e-19!358;CL:0002320!3.49e-18!365;CL:0000057!9.24e-18!75;CL:0000219!4.49e-17!390;CL:0002371!1.21e-14!591;CL:0000144!1.41e-11!625;CL:0002539!2.18e-11!10;CL:0002551!4.04e-09!6;CL:0000680!7.30e-09!57;CL:0000056!7.30e-09!57;CL:0000355!7.30e-09!57;CL:0000548!1.07e-08!679;CL:0000004!1.07e-08!679;CL:0000255!1.07e-08!679;CL:0000012!1.77e-08!682;CL:0002570!1.79e-07!8;CL:0000187!3.10e-07!54;CL:0000188!3.42e-07!9;CL:0002057!8.96e-07!42|ontology_enrichment_celltype_v019=CL:0002620;5.87e-22;23!CL:0002551;9.57e-18;6!CL:0000569;1.27e-11;4!CL:0002582;5.80e-10;3!CL:0000057;1.04e-09;73!CL:0002570;6.87e-09;8!CL:0000723;2.45e-08;61!CL:0000048;1.75e-07;58!CL:0002583;3.87e-07;2!CL:0000134;5.12e-07;55|ontology_enrichment_celltype_v019_2=CL:0002620,4.34e-22,23;CL:0002551,8.22e-18,6;CL:0000057,2.82e-17,76;CL:0000048,4.54e-17,427;CL:0000723,1.26e-16,433;CL:0000034,4.70e-16,441;CL:0000134,8.40e-15,354;CL:0002320,3.00e-14,361;CL:0000219,5.50e-14,386;CL:0000569,1.95e-11,4;CL:0000011,1.95e-11,4;CL:0002582,4.25e-10,3;CL:0002570,7.14e-09,8;CL:0002583,3.44e-07,2|ontology_enrichment_development_v019=CL:0000011;1.27e-11;4|ontology_enrichment_disease=DOID:2394!4.62e-10!14;DOID:17!2.03e-07!5;DOID:450!2.03e-07!5;DOID:66!2.03e-07!5;DOID:423!2.03e-07!5;DOID:0080000!2.03e-07!5;DOID:11722!2.03e-07!5|ontology_enrichment_disease_v019=DOID:2394;1.52e-15;14!DOID:17;1.56e-09;5!DOID:450;1.56e-09;5!DOID:66;1.56e-09;5!DOID:423;1.56e-09;5!DOID:0080000;1.56e-09;5!DOID:11722;1.56e-09;5!DOID:120;3.24e-07;27|ontology_enrichment_disease_v019_2=DOID:2394,2.02e-15,14;DOID:17,9.83e-10,5;DOID:450,9.83e-10,5;DOID:66,9.83e-10,5;DOID:423,9.83e-10,5;DOID:0080000,9.83e-10,5;DOID:11722,9.83e-10,5;DOID:120,3.70e-07,27|ontology_enrichment_uberon=UBERON:0002384!5.66e-18!375;UBERON:0002199!2.66e-12!45;UBERON:0002416!2.66e-12!45;UBERON:0004290!4.66e-12!70;UBERON:0000914!6.19e-12!83;UBERON:0002329!6.19e-12!83;UBERON:0003077!6.19e-12!83;UBERON:0003059!6.19e-12!83;UBERON:0007282!6.19e-12!83;UBERON:0009618!6.19e-12!83;UBERON:0007285!6.19e-12!83;UBERON:0004237!2.18e-11!10;UBERON:0004695!2.18e-11!10;UBERON:0002111!2.18e-11!10;UBERON:0004178!2.18e-11!10;UBERON:0002204!2.80e-11!167;UBERON:0002097!9.43e-11!40;UBERON:0000486!7.48e-09!82;UBERON:0001134!8.48e-08!61;UBERON:0002036!8.48e-08!61;UBERON:0003082!8.48e-08!61;UBERON:0003102!1.27e-07!95;UBERON:0002067!1.43e-07!9;UBERON:0004016!1.43e-07!9;UBERON:0010083!1.43e-07!9;UBERON:0002385!2.53e-07!63;UBERON:0001015!2.53e-07!63;UBERON:0000383!2.53e-07!63;UBERON:0000947!3.18e-07!21;UBERON:0010191!3.18e-07!21;UBERON:0000992!4.59e-07!13;UBERON:0001135!9.78e-07!15|ontology_enrichment_uberon_v019=UBERON:0002067;2.34e-15;9!UBERON:0002119;2.66e-12;4!UBERON:0000992;2.73e-10;13!UBERON:0002097;6.71e-10;41!UBERON:0002199;5.15e-09;46!UBERON:0002416;5.15e-09;46!UBERON:0003102;1.41e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.81e-15,9;UBERON:0004016,1.81e-15,9;UBERON:0010083,1.81e-15,9;UBERON:0002199,2.30e-14,46;UBERON:0002416,2.30e-14,46;UBERON:0002384,1.69e-13,371;UBERON:0002097,1.43e-12,41;UBERON:0002119,4.20e-12,4;UBERON:0000992,4.19e-10,13;UBERON:0003102,1.58e-08,99;UBERON:0002329,9.15e-07,71;UBERON:0003059,9.15e-07,71;UBERON:0007282,9.15e-07,71;UBERON:0004290,9.15e-07,71;UBERON:0009618,9.15e-07,71|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.929716147622738,1.6446715520873,1.85823822537062,0.863077176966451,0.256160706529101,0,0.344745680736619,0.645484683583826,2.70852973188684,0.376484679085209,0.272906150057846,0.674170453335254,0,0.641858054152187,0,0,0,0,0.580418477257168,0.56738522469114,0,1.00499466102697,1.5644487552606,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.144846518960824,9.54343136461319,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,1.14734648299525,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0,2.80944069147288,2.2818872861778,3.43731965269142,1.64408298101271,3.39933183173076,3.23036855415172,1.42907919878425,0.245668634623536,0,0,0.494533858557114,0,0,0.673344455816265,1.00094815897571,1.6623846929051,0,0,1.20190447125277,0,2.69084453533293,0.85422955527427,1.48352330811693,5.10154863343484,1.75189299705346,0,0.37223371266318,3.54430297706659,0.487185025805993,2.52433774244115,0.736399189138395,0,2.4850671476163,1.10827308050404,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,1.690605505112,0,0,0.257207374262142,0,0.799266537048298,0,0,0,2.28015329005615,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.723906533337896,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0.921845842708516,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,2.7757744884478,3.37367278094941,2.95657761649713,7.2695620085707,2.67283870457906,0,0,0,0.229628896329213,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.290012154876366,0.308097234229289,0.307007349452259,5.92697261683481,0.322260734604821,0.145016693914229,1.27839941124151,0,0,0,0,0,0.464845549297286,2.51849877464512,6.2733354314454,0.308033580176089,0.532306030317022,7.82939692867565,0.37064843820784,0,0,0,0,0.255897791311334,0,1.59101623962968,0,0,0,0,0,0,0,0,0.731140468893853,0,0.136499911407986,0,2.26016233240486,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4348364545594,0.199579371432817,0.5745161103971,0,0,0.280797178113459,0.228234679033192,0,0,0,0.481764225311099,1.00899853595524,0,0.687010689511529,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43972064943233,0,0,0,0,0,0,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0.869767748958028,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74921674654501,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,2.38807684618998,0.233713309847224,3.32883516901568,1.89403005275089,0.754703705257725,0.889811221596536,1.14420034198462,1.20984739010591,2.48699520932449,2.51353754982378,1.11507737014592,3.14862178514523,2.32894435314389,3.7323558705677,3.98762571836992,1.5652351854352,0,0,3.25496586563729,2.00033525122815,0.214821114084977,1.39210127963548,0.398095888698616,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4517996303005,0,0,0.80682027481408,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08827603141431,5.28323109506778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p3@RFX8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=731220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37253 | |||
|TSSclassifier=W | |||
|UniProt=Q6ZV50,E9PDA6 | |||
|association_with_transcript=-313bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |||
|description=CAGE_peak_3_at_RFX8_5end | |||
|id=chr2:102091478..102091490,- | |||
|ontology_enrichment_celltype=CL:0000048!3.57e-29!430;CL:0000723!3.36e-28!436;CL:0000034!6.04e-27!444;CL:0000055!4.12e-22!180;CL:0002620!1.11e-19!23;CL:0000134!3.47e-19!358;CL:0002320!3.49e-18!365;CL:0000057!9.24e-18!75;CL:0000219!4.49e-17!390;CL:0002371!1.21e-14!591;CL:0000144!1.41e-11!625;CL:0002539!2.18e-11!10;CL:0002551!4.04e-09!6;CL:0000680!7.30e-09!57;CL:0000056!7.30e-09!57;CL:0000355!7.30e-09!57;CL:0000548!1.07e-08!679;CL:0000004!1.07e-08!679;CL:0000255!1.07e-08!679;CL:0000012!1.77e-08!682;CL:0002570!1.79e-07!8;CL:0000187!3.10e-07!54;CL:0000188!3.42e-07!9;CL:0002057!8.96e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.87e-22;23!CL:0002551;9.57e-18;6!CL:0000569;1.27e-11;4!CL:0002582;5.80e-10;3!CL:0000057;1.04e-09;73!CL:0002570;6.87e-09;8!CL:0000723;2.45e-08;61!CL:0000048;1.75e-07;58!CL:0002583;3.87e-07;2!CL:0000134;5.12e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.34e-22,23;CL:0002551,8.22e-18,6;CL:0000057,2.82e-17,76;CL:0000048,4.54e-17,427;CL:0000723,1.26e-16,433;CL:0000034,4.70e-16,441;CL:0000134,8.40e-15,354;CL:0002320,3.00e-14,361;CL:0000219,5.50e-14,386;CL:0000569,1.95e-11,4;CL:0000011,1.95e-11,4;CL:0002582,4.25e-10,3;CL:0002570,7.14e-09,8;CL:0002583,3.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;1.27e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!4.62e-10!14;DOID:17!2.03e-07!5;DOID:450!2.03e-07!5;DOID:66!2.03e-07!5;DOID:423!2.03e-07!5;DOID:0080000!2.03e-07!5;DOID:11722!2.03e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.52e-15;14!DOID:17;1.56e-09;5!DOID:450;1.56e-09;5!DOID:66;1.56e-09;5!DOID:423;1.56e-09;5!DOID:0080000;1.56e-09;5!DOID:11722;1.56e-09;5!DOID:120;3.24e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.02e-15,14;DOID:17,9.83e-10,5;DOID:450,9.83e-10,5;DOID:66,9.83e-10,5;DOID:423,9.83e-10,5;DOID:0080000,9.83e-10,5;DOID:11722,9.83e-10,5;DOID:120,3.70e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.66e-18!375;UBERON:0002199!2.66e-12!45;UBERON:0002416!2.66e-12!45;UBERON:0004290!4.66e-12!70;UBERON:0000914!6.19e-12!83;UBERON:0002329!6.19e-12!83;UBERON:0003077!6.19e-12!83;UBERON:0003059!6.19e-12!83;UBERON:0007282!6.19e-12!83;UBERON:0009618!6.19e-12!83;UBERON:0007285!6.19e-12!83;UBERON:0004237!2.18e-11!10;UBERON:0004695!2.18e-11!10;UBERON:0002111!2.18e-11!10;UBERON:0004178!2.18e-11!10;UBERON:0002204!2.80e-11!167;UBERON:0002097!9.43e-11!40;UBERON:0000486!7.48e-09!82;UBERON:0001134!8.48e-08!61;UBERON:0002036!8.48e-08!61;UBERON:0003082!8.48e-08!61;UBERON:0003102!1.27e-07!95;UBERON:0002067!1.43e-07!9;UBERON:0004016!1.43e-07!9;UBERON:0010083!1.43e-07!9;UBERON:0002385!2.53e-07!63;UBERON:0001015!2.53e-07!63;UBERON:0000383!2.53e-07!63;UBERON:0000947!3.18e-07!21;UBERON:0010191!3.18e-07!21;UBERON:0000992!4.59e-07!13;UBERON:0001135!9.78e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.34e-15;9!UBERON:0002119;2.66e-12;4!UBERON:0000992;2.73e-10;13!UBERON:0002097;6.71e-10;41!UBERON:0002199;5.15e-09;46!UBERON:0002416;5.15e-09;46!UBERON:0003102;1.41e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.81e-15,9;UBERON:0004016,1.81e-15,9;UBERON:0010083,1.81e-15,9;UBERON:0002199,2.30e-14,46;UBERON:0002416,2.30e-14,46;UBERON:0002384,1.69e-13,371;UBERON:0002097,1.43e-12,41;UBERON:0002119,4.20e-12,4;UBERON:0000992,4.19e-10,13;UBERON:0003102,1.58e-08,99;UBERON:0002329,9.15e-07,71;UBERON:0003059,9.15e-07,71;UBERON:0007282,9.15e-07,71;UBERON:0004290,9.15e-07,71;UBERON:0009618,9.15e-07,71 | |||
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|short_description=p3@RFX8 | |||
}} |
Revision as of 12:42, 12 September 2013
Short description: | p3@RFX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RFX8_5end |
Coexpression cluster: | NA |
Association with transcript: | -313bp_to_ENST00000428343, ENST00000481179, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.34e-22 | 23 |
fibroblast of dermis | 8.22e-18 | 6 |
fibroblast | 2.82e-17 | 76 |
multi fate stem cell | 4.54e-17 | 427 |
somatic stem cell | 1.26e-16 | 433 |
stem cell | 4.70e-16 | 441 |
mesenchymal cell | 8.40e-15 | 354 |
connective tissue cell | 3.00e-14 | 361 |
motile cell | 5.50e-14 | 386 |
cardiac mesenchymal cell | 1.95e-11 | 4 |
migratory trunk neural crest cell | 1.95e-11 | 4 |
visceral preadipocyte | 4.25e-10 | 3 |
mesenchymal stem cell of adipose | 7.14e-09 | 8 |
subcutaneous preadipocyte | 3.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.81e-15 | 9 |
dermatome | 1.81e-15 | 9 |
future dermis | 1.81e-15 | 9 |
integument | 2.30e-14 | 46 |
integumental system | 2.30e-14 | 46 |
connective tissue | 1.69e-13 | 371 |
skin of body | 1.43e-12 | 41 |
left ovary | 4.20e-12 | 4 |
female gonad | 4.19e-10 | 13 |
surface structure | 1.58e-08 | 99 |
somite | 9.15e-07 | 71 |
presomitic mesoderm | 9.15e-07 | 71 |
presumptive segmental plate | 9.15e-07 | 71 |
dermomyotome | 9.15e-07 | 71 |
trunk paraxial mesoderm | 9.15e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.02e-15 | 14 |
musculoskeletal system disease | 9.83e-10 | 5 |
myotonic disease | 9.83e-10 | 5 |
muscle tissue disease | 9.83e-10 | 5 |
myopathy | 9.83e-10 | 5 |
muscular disease | 9.83e-10 | 5 |
myotonic dystrophy | 9.83e-10 | 5 |
female reproductive organ cancer | 3.70e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.