FFCP PHASE1:Hg19::chr2:176994919..176994931,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3234|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5139|TSSclassifier=S|UniProt=F8VSA3|association_with_transcript=-121bp_to_ENST00000548663_5end|description=CAGE_peak_2_at_HOXD8_5end|id=chr2:176994919..176994931,+|ontology_enrichment_celltype=CL:0002078!2.28e-08!44;CL:0002620!5.86e-08!23;CL:0002139!1.11e-07!24|ontology_enrichment_celltype_v019=CL:0002559;2.69e-11;5!CL:0002139;1.00e-10;24!CL:0002078;3.43e-09;45!CL:0002138;6.94e-09;6!CL:0000115;2.18e-08;36!CL:0002144;3.05e-08;3!CL:0002681;6.36e-08;12!CL:0002584;6.36e-08;12!CL:0000346;9.87e-08;3!CL:1000428;9.87e-08;3!CL:0000239;7.45e-07;3!CL:1000615;7.45e-07;3!CL:0002580;7.45e-07;3!CL:0002306;7.45e-07;3|ontology_enrichment_celltype_v019_2=CL:0002078,9.71e-13,45;CL:0002559,1.54e-11,5;CL:0002139,9.31e-11,24;CL:0000115,2.08e-10,36;CL:0005020,6.97e-09,6;CL:0002138,6.97e-09,6;CL:0005022,6.97e-09,6;CL:0002144,2.91e-08,3;CL:0002681,4.25e-08,12;CL:0002584,4.25e-08,12;CL:0000346,5.94e-08,3;CL:1000428,5.94e-08,3;CL:0000213,6.48e-07,58;CL:0000215,6.48e-07,58;CL:0000239,8.61e-07,3;CL:1000615,8.61e-07,3;CL:0002306,8.61e-07,3;CL:0002580,9.55e-07,3|ontology_enrichment_development_v019=CL:0005022;6.94e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002199!1.96e-12!45;UBERON:0002416!1.96e-12!45;UBERON:0002097!1.59e-11!40;UBERON:0003133!4.23e-08!48;UBERON:0002465!4.95e-08!10;UBERON:0000489!6.03e-08!32;UBERON:0001473!1.40e-07!8;UBERON:0004536!1.40e-07!8;UBERON:0006558!1.40e-07!8;UBERON:0009569!2.05e-07!113;UBERON:0002113!2.84e-07!27;UBERON:0003918!2.84e-07!27;UBERON:0005095!2.84e-07!27;UBERON:0007687!2.84e-07!27;UBERON:0002067!6.67e-07!9;UBERON:0004016!6.67e-07!9;UBERON:0010083!6.67e-07!9|ontology_enrichment_uberon_v019=UBERON:0002073;2.69e-11;5!UBERON:0005904;3.57e-10;4!UBERON:0001473;1.90e-09;8!UBERON:0004536;1.90e-09;8!UBERON:0006558;1.90e-09;8!UBERON:0010523;3.05e-08;3!UBERON:0001915;3.05e-08;3!UBERON:0001982;3.05e-08;3!UBERON:0006947;5.87e-08;3!UBERON:0004054;5.87e-08;3!UBERON:0001225;6.36e-08;12!UBERON:0008987;6.36e-08;12!UBERON:0000412;9.87e-08;3!UBERON:0001992;9.87e-08;3!UBERON:0002465;2.16e-07;10!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0000991;5.53e-07;21!UBERON:0003135;6.65e-07;11!UBERON:0006853;7.45e-07;3!UBERON:0007685;7.45e-07;3!UBERON:0004134;7.45e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.54e-11,5;UBERON:0005086,1.54e-11,5;UBERON:0005904,2.75e-10,4;UBERON:0002113,7.21e-10,26;UBERON:0003918,7.21e-10,26;UBERON:0011143,7.21e-10,26;UBERON:0005095,7.21e-10,26;UBERON:0007687,7.21e-10,26;UBERON:0001473,1.97e-09,8;UBERON:0004536,1.97e-09,8;UBERON:0006558,1.97e-09,8;UBERON:0010523,2.91e-08,3;UBERON:0001915,2.91e-08,3;UBERON:0001982,2.91e-08,3;UBERON:0001225,4.25e-08,12;UBERON:0008987,4.25e-08,12;UBERON:0006947,4.62e-08,3;UBERON:0004054,4.62e-08,3;UBERON:0000412,5.94e-08,3;UBERON:0001992,5.94e-08,3;UBERON:0000489,8.10e-08,31;UBERON:0003133,8.29e-08,48;UBERON:0006555,1.06e-07,16;UBERON:0004819,1.06e-07,16;UBERON:0004876,2.00e-07,11;UBERON:0002465,2.22e-07,10;UBERON:0000991,3.60e-07,21;UBERON:0009196,3.60e-07,21;UBERON:0009117,3.60e-07,21;UBERON:0005564,3.60e-07,21;UBERON:0003135,3.94e-07,11;UBERON:0006853,8.61e-07,3;UBERON:0007685,8.61e-07,3;UBERON:0004134,8.61e-07,3;UBERON:0004176,9.25e-07,22|phase1_expression=2.72517568905835,2.5692062866918,0.281908808191942,3.00219895059391,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,2.58416759169329,1.42306505074684,2.34304428935269,3.62546385398232,8.36299316290364,8.7862340717341,1.83831540172934,2.43042584364528,0.535798369704479,1.12264686313085,0.900891843866578,0,3.79706263827252,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.597794722207204,0.822041490506354,1.13311061057692,0.702254033511242,0,0,0,0,0.247266929278557,0.910161361938026,4.31170885089743,0,0,0,0,0,0,0,0.717558542755448,0.85422955527427,0.847727604638247,0.600182192168805,0.721367704669072,0,1.11670113798954,0.843881661206331,0.779496041289589,0.252433774244115,0.828449087780694,0,0.710019185033229,1.91428986632517,0,0,0,0,0,0,0,0,0,0,6.25798129319264,1.92972281457866,8.28809528114883,2.3218396401599,1.44375896333917,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,1.38895653772983,2.09279567458058,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.3174894714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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5139 | |||
|TSSclassifier=S | |||
|UniProt=F8VSA3 | |||
|association_with_transcript=-121bp_to_ENST00000548663_5end | |||
|description=CAGE_peak_2_at_HOXD8_5end | |||
|id=chr2:176994919..176994931,+ | |||
|ontology_enrichment_celltype=CL:0002078!2.28e-08!44;CL:0002620!5.86e-08!23;CL:0002139!1.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002559;2.69e-11;5!CL:0002139;1.00e-10;24!CL:0002078;3.43e-09;45!CL:0002138;6.94e-09;6!CL:0000115;2.18e-08;36!CL:0002144;3.05e-08;3!CL:0002681;6.36e-08;12!CL:0002584;6.36e-08;12!CL:0000346;9.87e-08;3!CL:1000428;9.87e-08;3!CL:0000239;7.45e-07;3!CL:1000615;7.45e-07;3!CL:0002580;7.45e-07;3!CL:0002306;7.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.71e-13,45;CL:0002559,1.54e-11,5;CL:0002139,9.31e-11,24;CL:0000115,2.08e-10,36;CL:0005020,6.97e-09,6;CL:0002138,6.97e-09,6;CL:0005022,6.97e-09,6;CL:0002144,2.91e-08,3;CL:0002681,4.25e-08,12;CL:0002584,4.25e-08,12;CL:0000346,5.94e-08,3;CL:1000428,5.94e-08,3;CL:0000213,6.48e-07,58;CL:0000215,6.48e-07,58;CL:0000239,8.61e-07,3;CL:1000615,8.61e-07,3;CL:0002306,8.61e-07,3;CL:0002580,9.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;6.94e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.96e-12!45;UBERON:0002416!1.96e-12!45;UBERON:0002097!1.59e-11!40;UBERON:0003133!4.23e-08!48;UBERON:0002465!4.95e-08!10;UBERON:0000489!6.03e-08!32;UBERON:0001473!1.40e-07!8;UBERON:0004536!1.40e-07!8;UBERON:0006558!1.40e-07!8;UBERON:0009569!2.05e-07!113;UBERON:0002113!2.84e-07!27;UBERON:0003918!2.84e-07!27;UBERON:0005095!2.84e-07!27;UBERON:0007687!2.84e-07!27;UBERON:0002067!6.67e-07!9;UBERON:0004016!6.67e-07!9;UBERON:0010083!6.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.69e-11;5!UBERON:0005904;3.57e-10;4!UBERON:0001473;1.90e-09;8!UBERON:0004536;1.90e-09;8!UBERON:0006558;1.90e-09;8!UBERON:0010523;3.05e-08;3!UBERON:0001915;3.05e-08;3!UBERON:0001982;3.05e-08;3!UBERON:0006947;5.87e-08;3!UBERON:0004054;5.87e-08;3!UBERON:0001225;6.36e-08;12!UBERON:0008987;6.36e-08;12!UBERON:0000412;9.87e-08;3!UBERON:0001992;9.87e-08;3!UBERON:0002465;2.16e-07;10!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0000991;5.53e-07;21!UBERON:0003135;6.65e-07;11!UBERON:0006853;7.45e-07;3!UBERON:0007685;7.45e-07;3!UBERON:0004134;7.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.54e-11,5;UBERON:0005086,1.54e-11,5;UBERON:0005904,2.75e-10,4;UBERON:0002113,7.21e-10,26;UBERON:0003918,7.21e-10,26;UBERON:0011143,7.21e-10,26;UBERON:0005095,7.21e-10,26;UBERON:0007687,7.21e-10,26;UBERON:0001473,1.97e-09,8;UBERON:0004536,1.97e-09,8;UBERON:0006558,1.97e-09,8;UBERON:0010523,2.91e-08,3;UBERON:0001915,2.91e-08,3;UBERON:0001982,2.91e-08,3;UBERON:0001225,4.25e-08,12;UBERON:0008987,4.25e-08,12;UBERON:0006947,4.62e-08,3;UBERON:0004054,4.62e-08,3;UBERON:0000412,5.94e-08,3;UBERON:0001992,5.94e-08,3;UBERON:0000489,8.10e-08,31;UBERON:0003133,8.29e-08,48;UBERON:0006555,1.06e-07,16;UBERON:0004819,1.06e-07,16;UBERON:0004876,2.00e-07,11;UBERON:0002465,2.22e-07,10;UBERON:0000991,3.60e-07,21;UBERON:0009196,3.60e-07,21;UBERON:0009117,3.60e-07,21;UBERON:0005564,3.60e-07,21;UBERON:0003135,3.94e-07,11;UBERON:0006853,8.61e-07,3;UBERON:0007685,8.61e-07,3;UBERON:0004134,8.61e-07,3;UBERON:0004176,9.25e-07,22 | |||
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| |||
|short_description=p2@HOXD8 | |||
}} |
Revision as of 14:50, 12 September 2013
Short description: | p2@HOXD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HOXD8_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_ENST00000548663_5end |
EntrezGene: | HOXD8 |
HGNC: | 5139 |
UniProt: | F8VSA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.71e-13 | 45 |
hair follicle cell | 1.54e-11 | 5 |
endothelial cell of vascular tree | 9.31e-11 | 24 |
endothelial cell | 2.08e-10 | 36 |
lymphangioblast | 6.97e-09 | 6 |
endothelial cell of lymphatic vessel | 6.97e-09 | 6 |
vascular lymphangioblast | 6.97e-09 | 6 |
capillary endothelial cell | 2.91e-08 | 3 |
kidney cortical cell | 4.25e-08 | 12 |
renal cortical epithelial cell | 4.25e-08 | 12 |
hair follicle dermal papilla cell | 5.94e-08 | 3 |
stem cell of epidermis | 5.94e-08 | 3 |
lining cell | 6.48e-07 | 58 |
barrier cell | 6.48e-07 | 58 |
brush border epithelial cell | 8.61e-07 | 3 |
kidney cortex tubule cell | 8.61e-07 | 3 |
epithelial cell of proximal tubule | 8.61e-07 | 3 |
preadipocyte of the breast | 9.55e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.