FFCP PHASE1:Mm9::chr10:127705712..127705778,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127705712..127705778,+|id=chr10:127705712..127705778,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!3.00e-17!25;UBERON:0002330!3.00e-17!25;UBERON:0009854!7.83e-17!23;UBERON:0009856!7.83e-17!23;UBERON:0002107!1.04e-16!22;UBERON:0007499!1.04e-16!22;UBERON:0006925!1.04e-16!22;UBERON:0009497!1.04e-16!22;UBERON:0000015!1.04e-16!22;UBERON:0002423!1.04e-16!22;UBERON:0006235!1.04e-16!22;UBERON:0008835!1.04e-16!22;UBERON:0003894!1.04e-16!22;UBERON:0004161!1.04e-16!22;UBERON:0008836!1.04e-16!22;UBERON:0005172!3.14e-14!49;UBERON:0005173!3.14e-14!49;UBERON:0002417!3.14e-14!49;UBERON:0000916!3.14e-14!49;UBERON:0009569!8.67e-11!66;UBERON:0005177!6.02e-10!85;UBERON:0005256!9.26e-10!47;UBERON:0000466!1.45e-07!79;UBERON:0002530!6.70e-07!65;UBERON:0002100!9.94e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.88e-22,23;UBERON:0009856,3.88e-22,23;UBERON:0002107,5.68e-22,22;UBERON:0007499,5.68e-22,22;UBERON:0006925,5.68e-22,22;UBERON:0009497,5.68e-22,22;UBERON:0000015,5.68e-22,22;UBERON:0002423,5.68e-22,22;UBERON:0006235,5.68e-22,22;UBERON:0008835,5.68e-22,22;UBERON:0003894,5.68e-22,22;UBERON:0004161,5.68e-22,22;UBERON:0008836,5.68e-22,22;UBERON:0002365,2.39e-21,25;UBERON:0002330,2.39e-21,25;UBERON:0005256,6.26e-16,45;UBERON:0005172,4.95e-14,49;UBERON:0005173,4.95e-14,49;UBERON:0002417,4.95e-14,49;UBERON:0000916,4.95e-14,49;UBERON:0003104,4.04e-10,61;UBERON:0009142,4.04e-10,61;UBERON:0005177,1.82e-09,79;UBERON:0002530,6.68e-09,65;UBERON:0009569,7.03e-09,66;UBERON:0000949,1.00e-07,72;UBERON:0002100,1.45e-07,90;UBERON:0002368,1.90e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,3.55717918444456,0,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0.916789486660861,0,0,0.186399445825301,0.227178579999552,0,4.34796733052517,1145.22418026223,896.882189160523,1192.20435032794,1623.79126720173,1043.0065931626,324.145721664083,0,0,0,0,0,0,0,0,0,0,497.156612296787,0,5.93768556259299,3.12273588179045,8.8294988710521,24.2146272118861,28.1851337833404,25.8695155698551,11.4356598110005,2.96633961281249,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,0,0,0.631325567659422,0.130120442962704,0,0,7.9873553452929,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,1.40715635988658,0,0,0.590292695242212,0.154267112887378,0,0,0,0.987359099480883,0.164167464079095,0,0,0.219550115291051,0.805238512562231,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,4.75564065281398,0,0,6.53471542880701,4.57599885694647,1.36474860983384,0,0,0.199141273254367,0.189667900953082,1.94222471436539,0,0.610953983535943,0.775809948670503,1.47285221769669,0.505892296994058,0.295220295959204,0.31399745568275,0.246794327843601,962.285227524885,12.346537822991,22.6042844380183,39.3508696673494,77.4925663704081,148.806307567241,325.921090280217,511.523732387541,641.40695712204,1180.61407670875,1163.0847908063,1379.89863395481,1378.58243982013,1494.00406305717,1296.50510752286,1387.50756744104,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,4.99891645860629,2.14647012643579,0.315270288212382,0,0.159454768657487,0.327726629431476,0,0,0,0,0.983528546038072,2.20749397043786,0.321101179975584,0.234423373184406,0,0,2.2085575359138,0,0,0,0.668396022247182,1.41538265394416,0.809621403349789,0.292255857911312,0,0,0.141940085208269,17.2723635557238,0.162886959353576,0,0,1.94224508923985,0.302323556964751,0,0,3.99665692327106,6.20227903603731,3.99887102425256,7.84294232446387,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0,0,0,0.493647061806363,0.913394847343798,0,0.42366414172764,170.247923298431,0,0,0,0,0,0,0,0,0,1.48155621895769,0,0,0.228778173206523,0,0,0,4.77335309007557,0,1.62655573701479,1.40406943068342,2.09088296014469,10.4814030598165,34.9298657136686,134.311865553671,3.66458318777641,0,9.32008969630389,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.844780627453891,0.117357238645754,20.7024971901881,0,0,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,2.70465431645067,0.187682475451182,0,0,34.1069030744047,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,4.26834014385335,11.6691224192781,7.1268475293514,18.5681943534514,35.5594764482584,33.3776792727009,34.659274635916,31.8398486822385,36.2475398843043,34.5186204736519,38.205735047712,35.6620098895122,34.3464104354567,31.4353836246829,28.7393128343242,32.0229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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127705712..127705778,+ | |||
|id=chr10:127705712..127705778,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!3.00e-17!25;UBERON:0002330!3.00e-17!25;UBERON:0009854!7.83e-17!23;UBERON:0009856!7.83e-17!23;UBERON:0002107!1.04e-16!22;UBERON:0007499!1.04e-16!22;UBERON:0006925!1.04e-16!22;UBERON:0009497!1.04e-16!22;UBERON:0000015!1.04e-16!22;UBERON:0002423!1.04e-16!22;UBERON:0006235!1.04e-16!22;UBERON:0008835!1.04e-16!22;UBERON:0003894!1.04e-16!22;UBERON:0004161!1.04e-16!22;UBERON:0008836!1.04e-16!22;UBERON:0005172!3.14e-14!49;UBERON:0005173!3.14e-14!49;UBERON:0002417!3.14e-14!49;UBERON:0000916!3.14e-14!49;UBERON:0009569!8.67e-11!66;UBERON:0005177!6.02e-10!85;UBERON:0005256!9.26e-10!47;UBERON:0000466!1.45e-07!79;UBERON:0002530!6.70e-07!65;UBERON:0002100!9.94e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.88e-22,23;UBERON:0009856,3.88e-22,23;UBERON:0002107,5.68e-22,22;UBERON:0007499,5.68e-22,22;UBERON:0006925,5.68e-22,22;UBERON:0009497,5.68e-22,22;UBERON:0000015,5.68e-22,22;UBERON:0002423,5.68e-22,22;UBERON:0006235,5.68e-22,22;UBERON:0008835,5.68e-22,22;UBERON:0003894,5.68e-22,22;UBERON:0004161,5.68e-22,22;UBERON:0008836,5.68e-22,22;UBERON:0002365,2.39e-21,25;UBERON:0002330,2.39e-21,25;UBERON:0005256,6.26e-16,45;UBERON:0005172,4.95e-14,49;UBERON:0005173,4.95e-14,49;UBERON:0002417,4.95e-14,49;UBERON:0000916,4.95e-14,49;UBERON:0003104,4.04e-10,61;UBERON:0009142,4.04e-10,61;UBERON:0005177,1.82e-09,79;UBERON:0002530,6.68e-09,65;UBERON:0009569,7.03e-09,66;UBERON:0000949,1.00e-07,72;UBERON:0002100,1.45e-07,90;UBERON:0002368,1.90e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,3.55717918444456,0,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0.916789486660861,0,0,0.186399445825301,0.227178579999552,0,4.34796733052517,1145.22418026223,896.882189160523,1192.20435032794,1623.79126720173,1043.0065931626,324.145721664083,0,0,0,0,0,0,0,0,0,0,497.156612296787,0,5.93768556259299,3.12273588179045,8.8294988710521,24.2146272118861,28.1851337833404,25.8695155698551,11.4356598110005,2.96633961281249,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,0,0,0.631325567659422,0.130120442962704,0,0,7.9873553452929,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,1.40715635988658,0,0,0.590292695242212,0.154267112887378,0,0,0,0.987359099480883,0.164167464079095,0,0,0.219550115291051,0.805238512562231,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,4.75564065281398,0,0,6.53471542880701,4.57599885694647,1.36474860983384,0,0,0.199141273254367,0.189667900953082,1.94222471436539,0,0.610953983535943,0.775809948670503,1.47285221769669,0.505892296994058,0.295220295959204,0.31399745568275,0.246794327843601,962.285227524885,12.346537822991,22.6042844380183,39.3508696673494,77.4925663704081,148.806307567241,325.921090280217,511.523732387541,641.40695712204,1180.61407670875,1163.0847908063,1379.89863395481,1378.58243982013,1494.00406305717,1296.50510752286,1387.50756744104,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,4.99891645860629,2.14647012643579,0.315270288212382,0,0.159454768657487,0.327726629431476,0,0,0,0,0.983528546038072,2.20749397043786,0.321101179975584,0.234423373184406,0,0,2.2085575359138,0,0,0,0.668396022247182,1.41538265394416,0.809621403349789,0.292255857911312,0,0,0.141940085208269,17.2723635557238,0.162886959353576,0,0,1.94224508923985,0.302323556964751,0,0,3.99665692327106,6.20227903603731,3.99887102425256,7.84294232446387,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0,0,0,0.493647061806363,0.913394847343798,0,0.42366414172764,170.247923298431,0,0,0,0,0,0,0,0,0,1.48155621895769,0,0,0.228778173206523,0,0,0,4.77335309007557,0,1.62655573701479,1.40406943068342,2.09088296014469,10.4814030598165,34.9298657136686,134.311865553671,3.66458318777641,0,9.32008969630389,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.844780627453891,0.117357238645754,20.7024971901881,0,0,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,2.70465431645067,0.187682475451182,0,0,34.1069030744047,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,4.26834014385335,11.6691224192781,7.1268475293514,18.5681943534514,35.5594764482584,33.3776792727009,34.659274635916,31.8398486822385,36.2475398843043,34.5186204736519,38.205735047712,35.6620098895122,34.3464104354567,31.4353836246829,28.7393128343242,32.022930596975,38.3239887747075,32.5309613497018,37.0298792576249,33.8978789764335,35.0501199222562,34.4471007418619,35.4792364165796,35.4535207066125,31.0977553883713,32.0945047954168,37.4819354214578,39.2799590160417,30.4891996579128,34.7720822785739,36.830793885272,36.1002839963301,33.7586569216997,0,58.4829021113521,71.7669320521316,0.57386499620653,11.0295709559758,4.40548887678801 | |||
|short_description=p@chr10:127705712..127705778,+ | |||
}} |
Revision as of 16:08, 12 September 2013
Short description: | p@chr10:127705712..127705778, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127705712..127705778, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.88e-22 | 23 |
sac | 3.88e-22 | 23 |
liver | 5.68e-22 | 22 |
epithelial sac | 5.68e-22 | 22 |
digestive gland | 5.68e-22 | 22 |
epithelium of foregut-midgut junction | 5.68e-22 | 22 |
anatomical boundary | 5.68e-22 | 22 |
hepatobiliary system | 5.68e-22 | 22 |
foregut-midgut junction | 5.68e-22 | 22 |
hepatic diverticulum | 5.68e-22 | 22 |
liver primordium | 5.68e-22 | 22 |
septum transversum | 5.68e-22 | 22 |
liver bud | 5.68e-22 | 22 |
exocrine gland | 2.39e-21 | 25 |
exocrine system | 2.39e-21 | 25 |
trunk mesenchyme | 6.26e-16 | 45 |
abdomen element | 4.95e-14 | 49 |
abdominal segment element | 4.95e-14 | 49 |
abdominal segment of trunk | 4.95e-14 | 49 |
abdomen | 4.95e-14 | 49 |
mesenchyme | 4.04e-10 | 61 |
entire embryonic mesenchyme | 4.04e-10 | 61 |
trunk region element | 1.82e-09 | 79 |
gland | 6.68e-09 | 65 |
subdivision of trunk | 7.03e-09 | 66 |
endocrine system | 1.00e-07 | 72 |
trunk | 1.45e-07 | 90 |
endocrine gland | 1.90e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.