FFCP PHASE1:Mm9::chr10:41613773..41613784,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:41613773..41613784,+|id=chr10:41613773..41613784,+|ontology_enrichment_celltype=CL:0000553!5.15e-17!6;CL:0000556!5.15e-17!6;CL:0000050!4.51e-11!9;CL:0002027!3.78e-09!3;CL:0002006!3.78e-09!3;CL:0002024!3.78e-09!3;CL:0000414!6.57e-09!11;CL:0000839!2.06e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,5.23e-52,6;CL:0000556,5.23e-52,6;CL:0000050,7.03e-35,9;CL:0000839,2.59e-24,13;CL:0000763,7.64e-20,16;CL:0002031,3.96e-18,25;CL:0002027,2.33e-17,3;CL:0002006,2.33e-17,3;CL:0002024,2.33e-17,3;CL:0000049,8.88e-17,19;CL:0000988,3.15e-14,32;CL:0002032,3.15e-14,32;CL:0000037,3.15e-14,32;CL:0000837,3.15e-14,32;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0002320,5.79e-10,46;CL:0000134,5.79e-10,46;CL:0000219,1.65e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!3.59e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.64e-20,16;UBERON:0001474,1.52e-14,22;UBERON:0004765,1.52e-14,22;UBERON:0001434,1.52e-14,22;UBERON:0000029,4.85e-14,1;UBERON:0001097,4.85e-14,1;UBERON:0003968,4.85e-14,1;UBERON:0001467,4.85e-14,1;UBERON:0002204,4.21e-10,32;UBERON:0002384,5.79e-10,46;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,2.97e-07,45;UBERON:0003061,2.97e-07,45|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,0.607425802169478,2.09868563438444,3.78554598429885,3.97631857456642,5.94145512517242,0,0,0,0.47997726838022,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,4.14300613835475,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.272145996605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr10:41613773..41613784,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:41613773..41613784,+ | |||
|id=chr10:41613773..41613784,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.15e-17!6;CL:0000556!5.15e-17!6;CL:0000050!4.51e-11!9;CL:0002027!3.78e-09!3;CL:0002006!3.78e-09!3;CL:0002024!3.78e-09!3;CL:0000414!6.57e-09!11;CL:0000839!2.06e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.23e-52,6;CL:0000556,5.23e-52,6;CL:0000050,7.03e-35,9;CL:0000839,2.59e-24,13;CL:0000763,7.64e-20,16;CL:0002031,3.96e-18,25;CL:0002027,2.33e-17,3;CL:0002006,2.33e-17,3;CL:0002024,2.33e-17,3;CL:0000049,8.88e-17,19;CL:0000988,3.15e-14,32;CL:0002032,3.15e-14,32;CL:0000037,3.15e-14,32;CL:0000837,3.15e-14,32;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0002320,5.79e-10,46;CL:0000134,5.79e-10,46;CL:0000219,1.65e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.59e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.64e-20,16;UBERON:0001474,1.52e-14,22;UBERON:0004765,1.52e-14,22;UBERON:0001434,1.52e-14,22;UBERON:0000029,4.85e-14,1;UBERON:0001097,4.85e-14,1;UBERON:0003968,4.85e-14,1;UBERON:0001467,4.85e-14,1;UBERON:0002204,4.21e-10,32;UBERON:0002384,5.79e-10,46;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,2.97e-07,45;UBERON:0003061,2.97e-07,45 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,0.607425802169478,2.09868563438444,3.78554598429885,3.97631857456642,5.94145512517242,0,0,0,0.47997726838022,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,4.14300613835475,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.272145996605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:41613773..41613784,+ | |||
}} |
Revision as of 16:43, 12 September 2013
Short description: | p@chr10:41613773..41613784, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:41613773..41613784, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.23e-52 | 6 |
megakaryocyte | 5.23e-52 | 6 |
megakaryocyte-erythroid progenitor cell | 7.03e-35 | 9 |
myeloid lineage restricted progenitor cell | 2.59e-24 | 13 |
myeloid cell | 7.64e-20 | 16 |
hematopoietic lineage restricted progenitor cell | 3.96e-18 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 2.33e-17 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.33e-17 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.33e-17 | 3 |
common myeloid progenitor | 8.88e-17 | 19 |
hematopoietic cell | 3.15e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.15e-14 | 32 |
hematopoietic stem cell | 3.15e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.15e-14 | 32 |
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
connective tissue cell | 5.79e-10 | 46 |
mesenchymal cell | 5.79e-10 | 46 |
motile cell | 1.65e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.64e-20 | 16 |
bone element | 1.52e-14 | 22 |
skeletal element | 1.52e-14 | 22 |
skeletal system | 1.52e-14 | 22 |
lymph node | 4.85e-14 | 1 |
axillary lymph node | 4.85e-14 | 1 |
peripheral lymph node | 4.85e-14 | 1 |
shoulder | 4.85e-14 | 1 |
musculoskeletal system | 4.21e-10 | 32 |
connective tissue | 5.79e-10 | 46 |
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
hematopoietic system | 2.97e-07 | 45 |
blood island | 2.97e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.