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FFCP PHASE1:Mm9::chr10:42580488..42580498,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=268297|HGNC=|MCL_coexpression_id=40|UniProt=D3Z791|association_with_transcript=15bp_to_ENSMUST00000105495_5end|description=CAGE_peak_7_at_Scml4_5end|id=chr10:42580488..42580498,+|ontology_enrichment_celltype=CL:0000838!1.21e-08!12;CL:0000084!8.07e-08!11;CL:0000827!8.07e-08!11;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-23,9;CL:0000789,1.22e-23,9;CL:0002420,1.22e-23,9;CL:0002419,1.22e-23,9;CL:0000790,1.22e-23,9;CL:0000838,1.25e-22,12;CL:0000542,8.23e-21,13;CL:0000051,8.23e-21,13;CL:0000624,1.11e-19,8;CL:0002031,1.14e-19,25;CL:0000084,3.32e-19,11;CL:0000827,3.32e-19,11;CL:0000738,1.14e-15,17;CL:0002087,1.14e-15,17;CL:0000988,5.67e-15,32;CL:0002032,5.67e-15,32;CL:0000037,5.67e-15,32;CL:0000837,5.67e-15,32;CL:0000120,3.83e-13,3;CL:0000893,5.68e-12,6;CL:0002489,5.68e-12,6;CL:0000898,5.68e-12,6;CL:0000809,5.68e-12,6;CL:0000810,5.68e-12,6;CL:0000895,5.68e-12,6;CL:0000808,5.68e-12,6;CL:0000894,5.68e-12,6;CL:0000806,5.68e-12,6;CL:0000807,5.68e-12,6;CL:0000805,5.68e-12,6;CL:0002425,5.68e-12,6;CL:0002436,5.68e-12,6;CL:0002427,5.68e-12,6;CL:0002428,5.68e-12,6;CL:0002429,5.68e-12,6;CL:0002433,5.68e-12,6;CL:0002431,5.68e-12,6;CL:0002432,5.68e-12,6;CL:0000034,1.78e-11,97;CL:0000723,6.32e-11,91;CL:0000048,6.32e-11,91;CL:0002320,7.35e-10,46;CL:0000134,7.35e-10,46;CL:0000219,3.97e-08,54;CL:0000553,3.67e-07,6;CL:0000556,3.67e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.78e-08!29;UBERON:0002193!5.70e-08!48;UBERON:0002370!1.34e-07!23;UBERON:0000974!1.34e-07!23;UBERON:0004807!1.34e-07!23;UBERON:0005058!1.34e-07!23;UBERON:0003351!1.34e-07!23;UBERON:0009113!1.34e-07!23;UBERON:0003295!1.34e-07!23;UBERON:0009722!1.34e-07!23;UBERON:0005562!1.34e-07!23;UBERON:0007690!1.34e-07!23;UBERON:0006562!4.93e-07!24;UBERON:0003408!4.93e-07!24;UBERON:0001557!4.93e-07!24;UBERON:0001042!4.93e-07!24;UBERON:0008814!4.93e-07!24;UBERON:0009145!4.93e-07!24;UBERON:0002390!9.56e-07!45;UBERON:0003061!9.56e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.35e-10,46|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,6.58528949552039,1.12630977721333,2.57470978954193,0,0.159544317990673,8.38883576662908,7.16847299835779,0.666219523631325,0.809901069559304,0,2.5236973228659,3.70208970735495,2.97072756258621,0.255129870453209,0.595745707205312,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,1.67782606057736,4.35217285206807,4.03312558970957,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,1.22490799214954,0.862609239164127,1.83843757322004,0,0,0.153606533256243,0.923204014111357,0.914876436024097,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0.445326417194474,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.479260498023681,0,0.127070227073065,0.599162557619291,0.457500602818626,0.879580464790051,0.173824320192276,0.255715457330331,0.41557608911912,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0.330418782983798,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.252946148497029,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0,0,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0.753473828018764,0.27338845544205,0.457556346413045,1.18984900995699,0.69975726161829,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0.537080087002444,0.993406773906324,0.480781798079875,0.295379054349154,0.807731599585181,0.609654453239999,0.100826185136841,0.877120926657772,0.962118416403295,1.40252282617883,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0,0,1.5107877947794,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421|short_description=p7@Scml4}}
|EntrezGene=268297
|HGNC=
|MCL_coexpression_id=40
|UniProt=D3Z791
|association_with_transcript=15bp_to_ENSMUST00000105495_5end
|description=CAGE_peak_7_at_Scml4_5end
|id=chr10:42580488..42580498,+
|ontology_enrichment_celltype=CL:0000838!1.21e-08!12;CL:0000084!8.07e-08!11;CL:0000827!8.07e-08!11;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-23,9;CL:0000789,1.22e-23,9;CL:0002420,1.22e-23,9;CL:0002419,1.22e-23,9;CL:0000790,1.22e-23,9;CL:0000838,1.25e-22,12;CL:0000542,8.23e-21,13;CL:0000051,8.23e-21,13;CL:0000624,1.11e-19,8;CL:0002031,1.14e-19,25;CL:0000084,3.32e-19,11;CL:0000827,3.32e-19,11;CL:0000738,1.14e-15,17;CL:0002087,1.14e-15,17;CL:0000988,5.67e-15,32;CL:0002032,5.67e-15,32;CL:0000037,5.67e-15,32;CL:0000837,5.67e-15,32;CL:0000120,3.83e-13,3;CL:0000893,5.68e-12,6;CL:0002489,5.68e-12,6;CL:0000898,5.68e-12,6;CL:0000809,5.68e-12,6;CL:0000810,5.68e-12,6;CL:0000895,5.68e-12,6;CL:0000808,5.68e-12,6;CL:0000894,5.68e-12,6;CL:0000806,5.68e-12,6;CL:0000807,5.68e-12,6;CL:0000805,5.68e-12,6;CL:0002425,5.68e-12,6;CL:0002436,5.68e-12,6;CL:0002427,5.68e-12,6;CL:0002428,5.68e-12,6;CL:0002429,5.68e-12,6;CL:0002433,5.68e-12,6;CL:0002431,5.68e-12,6;CL:0002432,5.68e-12,6;CL:0000034,1.78e-11,97;CL:0000723,6.32e-11,91;CL:0000048,6.32e-11,91;CL:0002320,7.35e-10,46;CL:0000134,7.35e-10,46;CL:0000219,3.97e-08,54;CL:0000553,3.67e-07,6;CL:0000556,3.67e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.78e-08!29;UBERON:0002193!5.70e-08!48;UBERON:0002370!1.34e-07!23;UBERON:0000974!1.34e-07!23;UBERON:0004807!1.34e-07!23;UBERON:0005058!1.34e-07!23;UBERON:0003351!1.34e-07!23;UBERON:0009113!1.34e-07!23;UBERON:0003295!1.34e-07!23;UBERON:0009722!1.34e-07!23;UBERON:0005562!1.34e-07!23;UBERON:0007690!1.34e-07!23;UBERON:0006562!4.93e-07!24;UBERON:0003408!4.93e-07!24;UBERON:0001557!4.93e-07!24;UBERON:0001042!4.93e-07!24;UBERON:0008814!4.93e-07!24;UBERON:0009145!4.93e-07!24;UBERON:0002390!9.56e-07!45;UBERON:0003061!9.56e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.35e-10,46
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,6.58528949552039,1.12630977721333,2.57470978954193,0,0.159544317990673,8.38883576662908,7.16847299835779,0.666219523631325,0.809901069559304,0,2.5236973228659,3.70208970735495,2.97072756258621,0.255129870453209,0.595745707205312,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,1.67782606057736,4.35217285206807,4.03312558970957,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,1.22490799214954,0.862609239164127,1.83843757322004,0,0,0.153606533256243,0.923204014111357,0.914876436024097,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0.445326417194474,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.479260498023681,0,0.127070227073065,0.599162557619291,0.457500602818626,0.879580464790051,0.173824320192276,0.255715457330331,0.41557608911912,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0.330418782983798,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.252946148497029,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0,0,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0.753473828018764,0.27338845544205,0.457556346413045,1.18984900995699,0.69975726161829,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0.537080087002444,0.993406773906324,0.480781798079875,0.295379054349154,0.807731599585181,0.609654453239999,0.100826185136841,0.877120926657772,0.962118416403295,1.40252282617883,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0,0,1.5107877947794,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421
|short_description=p7@Scml4
}}

Revision as of 16:45, 12 September 2013

Short description:p7@Scml4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Scml4_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: 15bp_to_ENSMUST00000105495_5end
EntrezGene:Scml4
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p7@Scml4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.22e-239
alpha-beta T cell1.22e-239
immature T cell1.22e-239
mature T cell1.22e-239
immature alpha-beta T cell1.22e-239
lymphoid lineage restricted progenitor cell1.25e-2212
lymphocyte8.23e-2113
common lymphoid progenitor8.23e-2113
CD4-positive, alpha-beta T cell1.11e-198
hematopoietic lineage restricted progenitor cell1.14e-1925
T cell3.32e-1911
pro-T cell3.32e-1911
leukocyte1.14e-1517
nongranular leukocyte1.14e-1517
hematopoietic cell5.67e-1532
hematopoietic oligopotent progenitor cell5.67e-1532
hematopoietic stem cell5.67e-1532
hematopoietic multipotent progenitor cell5.67e-1532
granule cell3.83e-133
thymocyte5.68e-126
double negative thymocyte5.68e-126
naive T cell5.68e-126
double-positive, alpha-beta thymocyte5.68e-126
CD4-positive, alpha-beta thymocyte5.68e-126
naive thymus-derived CD4-positive, alpha-beta T cell5.68e-126
DN4 thymocyte5.68e-126
DN1 thymic pro-T cell5.68e-126
DN2 thymocyte5.68e-126
DN3 thymocyte5.68e-126
immature single positive thymocyte5.68e-126
early T lineage precursor5.68e-126
mature CD4 single-positive thymocyte5.68e-126
resting double-positive thymocyte5.68e-126
double-positive blast5.68e-126
CD69-positive double-positive thymocyte5.68e-126
CD69-positive, CD4-positive single-positive thymocyte5.68e-126
CD4-positive, CD8-intermediate double-positive thymocyte5.68e-126
CD24-positive, CD4 single-positive thymocyte5.68e-126
stem cell1.78e-1197
somatic stem cell6.32e-1191
multi fate stem cell6.32e-1191
connective tissue cell7.35e-1046
mesenchymal cell7.35e-1046
motile cell3.97e-0854
megakaryocyte progenitor cell3.67e-076
megakaryocyte3.67e-076

Uber anatomy
Ontology termp-valuen
connective tissue7.35e-1046







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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