FFCP PHASE1:Mm9::chr10:62706636..62706712,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67345|HGNC=|MCL_coexpression_id=317|UniProt=Q6PAV2|association_with_transcript=0bp_to_ENSMUST00000020258,ENSMUST00000092452_5end|description=CAGE_peak_1_at_Herc4_5end|id=chr10:62706636..62706712,+|ontology_enrichment_celltype=CL:0000414!3.62e-07!11;CL:0000063!9.04e-07!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!4.89e-12!69;UBERON:0002405!5.16e-12!70;UBERON:0000490!7.33e-12!66;UBERON:0003929!1.53e-11!55;UBERON:0004119!1.90e-11!130;UBERON:0000925!1.90e-11!130;UBERON:0006595!1.90e-11!130;UBERON:0005057!2.56e-11!51;UBERON:0001007!6.91e-11!128;UBERON:0001555!6.91e-11!128;UBERON:0007026!6.91e-11!128;UBERON:0004921!2.25e-10!126;UBERON:0004185!2.25e-10!126;UBERON:0005256!9.15e-10!47;UBERON:0003104!3.60e-09!131;UBERON:0009142!3.60e-09!131;UBERON:0000077!1.32e-08!97;UBERON:0000926!2.17e-08!193;UBERON:0004120!2.17e-08!193;UBERON:0006603!2.17e-08!193;UBERON:0009854!3.67e-08!23;UBERON:0009856!3.67e-08!23;UBERON:0002368!6.85e-08!60;UBERON:0002530!1.00e-07!65;UBERON:0002107!1.12e-07!22;UBERON:0007499!1.12e-07!22;UBERON:0006925!1.12e-07!22;UBERON:0009497!1.12e-07!22;UBERON:0000015!1.12e-07!22;UBERON:0002423!1.12e-07!22;UBERON:0006235!1.12e-07!22;UBERON:0008835!1.12e-07!22;UBERON:0003894!1.12e-07!22;UBERON:0004161!1.12e-07!22;UBERON:0008836!1.12e-07!22;UBERON:0001041!2.47e-07!92;UBERON:0009569!2.84e-07!66;UBERON:0004923!3.84e-07!24;UBERON:0005172!3.87e-07!49;UBERON:0005173!3.87e-07!49;UBERON:0002417!3.87e-07!49;UBERON:0000916!3.87e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.62e-15,118;UBERON:0000925,3.62e-15,118;UBERON:0006595,3.62e-15,118;UBERON:0001007,1.57e-14,116;UBERON:0001555,1.57e-14,116;UBERON:0007026,1.57e-14,116;UBERON:0004921,6.00e-14,114;UBERON:0005911,4.89e-12,69;UBERON:0000490,7.33e-12,66;UBERON:0003929,1.53e-11,55;UBERON:0001041,6.86e-11,80;UBERON:0005256,8.60e-10,45;UBERON:0009854,3.67e-08,23;UBERON:0009856,3.67e-08,23;UBERON:0002368,6.85e-08,60;UBERON:0002530,1.00e-07,65;UBERON:0002107,1.12e-07,22;UBERON:0007499,1.12e-07,22;UBERON:0006925,1.12e-07,22;UBERON:0009497,1.12e-07,22;UBERON:0000015,1.12e-07,22;UBERON:0002423,1.12e-07,22;UBERON:0006235,1.12e-07,22;UBERON:0008835,1.12e-07,22;UBERON:0003894,1.12e-07,22;UBERON:0004161,1.12e-07,22;UBERON:0008836,1.12e-07,22;UBERON:0009569,2.84e-07,66;UBERON:0004923,3.84e-07,24;UBERON:0005172,3.87e-07,49;UBERON:0005173,3.87e-07,49;UBERON:0002417,3.87e-07,49;UBERON:0000916,3.87e-07,49;UBERON:0003104,4.03e-07,61;UBERON:0009142,4.03e-07,61;UBERON:0000077,7.84e-07,35|phase1_expression=22.5809874417759,70.8420077507903,59.1499011206397,81.3628728415373,86.6549612807181,28.7073554969332,28.9679674338452,95.1638893764417,39.1392647581634,44.9403890538227,21.0598100917371,19.7037232718481,73.6163138704185,68.01307308198,47.3015861778241,50.4163415800667,30.7807226376385,67.0357101386255,83.9140333667121,98.034009565345,16.2432684188543,19.06386263057,24.0303806007821,26.8787270292923,34.8702107222098,52.8293406985819,28.861053742658,29.7350301106527,31.3538642103017,34.7801579068704,27.2728528106025,12.065582795733,10.4561013889377,15.8481681015439,18.7753552838328,15.9585259544153,23.0711372576477,133.93012183581,94.5415766873799,101.040082586943,167.057742600808,145.488688296149,129.631264259318,18.1291417884831,21.6946632809761,26.6142790634438,7.82391344348039,4.57852828398938,2.63623419281366,6.22175677037707,4.75953833526233,4.31257693094915,68.7908684836719,60.9304199289529,65.5382908327805,15.4355661621568,21.203474555468,14.4388185837684,5.05791152148994,1.5869729378161,1.90149421051854,6.43804610931351,8.00365316500025,10.3488467487361,2.96659908770092,9.9467216092454,2.39680088414724,3.07374644257244,5.39185984004084,3.64516033495565,3.78584930432488,3.71346279724945,4.41737081903227,4.28717797252339,2.30029130443767,6.43453150627015,5.50579404996943,8.17198963745201,8.44835932909339,3.16527090552465,3.65950574409639,2.6045668527838,8.37548997004143,11.8180148106653,11.4598685832608,10.0173719061047,7.83044244395066,4.84638559145781,17.8713816266314,24.5607570347053,84.0607017234866,82.6006921902131,40.1183086887573,46.4144744808523,55.8807719004995,67.2040330646003,19.9431076587088,22.8376632254597,21.0426663728324,22.6137327686618,23.0983208433756,32.0816193535795,73.8935195149272,42.6640021891999,20.5666488960653,19.7620695070577,17.1878311305026,27.1757633731363,63.4397814935571,56.7048971227631,20.2977832316379,32.8822716577113,40.1270965225542,48.3819676173918,52.2093859682529,46.6223053833096,33.1241256764061,21.8345028949067,41.5766959416441,20.2208562434261,23.6300424752621,22.7891368973554,50.325775528893,12.8823550685081,11.7290155815535,31.6766748458653,24.2026551501959,27.5955256256968,27.447169047782,11.9832511523858,13.7250180845588,6.53402630986895,18.251553620189,17.6443665557928,10.5971902725376,14.7639549391659,15.8869407606493,29.2356380933719,13.3943061969848,22.0963948680798,18.0867415718158,21.6107978167465,19.2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| ||
|EntrezGene=67345 | |||
|HGNC= | |||
|MCL_coexpression_id=317 | |||
|UniProt=Q6PAV2 | |||
|association_with_transcript=0bp_to_ENSMUST00000020258,ENSMUST00000092452_5end | |||
|description=CAGE_peak_1_at_Herc4_5end | |||
|id=chr10:62706636..62706712,+ | |||
|ontology_enrichment_celltype=CL:0000414!3.62e-07!11;CL:0000063!9.04e-07!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.62e-15,118;UBERON:0000925,3.62e-15,118;UBERON:0006595,3.62e-15,118;UBERON:0001007,1.57e-14,116;UBERON:0001555,1.57e-14,116;UBERON:0007026,1.57e-14,116;UBERON:0004921,6.00e-14,114;UBERON:0005911,4.89e-12,69;UBERON:0000490,7.33e-12,66;UBERON:0003929,1.53e-11,55;UBERON:0001041,6.86e-11,80;UBERON:0005256,8.60e-10,45;UBERON:0009854,3.67e-08,23;UBERON:0009856,3.67e-08,23;UBERON:0002368,6.85e-08,60;UBERON:0002530,1.00e-07,65;UBERON:0002107,1.12e-07,22;UBERON:0007499,1.12e-07,22;UBERON:0006925,1.12e-07,22;UBERON:0009497,1.12e-07,22;UBERON:0000015,1.12e-07,22;UBERON:0002423,1.12e-07,22;UBERON:0006235,1.12e-07,22;UBERON:0008835,1.12e-07,22;UBERON:0003894,1.12e-07,22;UBERON:0004161,1.12e-07,22;UBERON:0008836,1.12e-07,22;UBERON:0009569,2.84e-07,66;UBERON:0004923,3.84e-07,24;UBERON:0005172,3.87e-07,49;UBERON:0005173,3.87e-07,49;UBERON:0002417,3.87e-07,49;UBERON:0000916,3.87e-07,49;UBERON:0003104,4.03e-07,61;UBERON:0009142,4.03e-07,61;UBERON:0000077,7.84e-07,35 | |||
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| |||
|short_description=p1@Herc4 | |||
}} |
Revision as of 17:08, 12 September 2013
Short description: | p1@Herc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Herc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | 0bp_to_ENSMUST00000020258, ENSMUST00000092452_5end |
EntrezGene: | Herc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.