FFCP PHASE1:Mm9::chr11:32432845..32432870,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20868|HGNC=|MCL_coexpression_id=269|UniProt=A1A553,O55098|association_with_transcript=-395bp_to_NM_009288,uc007ijt.1,uc007iju.1_5end|description=CAGE_peak_3_at_Stk10_5end|id=chr11:32432845..32432870,+|ontology_enrichment_celltype=CL:0000988!2.71e-12!32;CL:0002032!2.71e-12!32;CL:0000037!2.71e-12!32;CL:0000566!2.71e-12!32;CL:0000837!2.71e-12!32;CL:0002031!5.74e-09!25;CL:0000838!6.28e-09!12;CL:0000542!2.37e-08!13;CL:0000051!2.37e-08!13;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000738!6.16e-08!17;CL:0002087!6.16e-08!17;CL:0000791!1.94e-07!9;CL:0000789!1.94e-07!9;CL:0002420!1.94e-07!9;CL:0002419!1.94e-07!9;CL:0000790!1.94e-07!9;CL:0002320!2.65e-07!46;CL:0000134!2.65e-07!46;CL:0000624!8.67e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,1.10e-27,32;CL:0002032,1.10e-27,32;CL:0000037,1.10e-27,32;CL:0000837,1.10e-27,32;CL:0000838,4.93e-22,12;CL:0000791,2.18e-20,9;CL:0000789,2.18e-20,9;CL:0002420,2.18e-20,9;CL:0002419,2.18e-20,9;CL:0000790,2.18e-20,9;CL:0000542,3.86e-20,13;CL:0000051,3.86e-20,13;CL:0000084,8.08e-20,11;CL:0000827,8.08e-20,11;CL:0002320,1.66e-19,46;CL:0000134,1.66e-19,46;CL:0000624,2.59e-18,8;CL:0002031,6.21e-18,25;CL:0000738,8.05e-18,17;CL:0002087,8.05e-18,17;CL:0000219,8.67e-16,54;CL:0000893,3.13e-14,6;CL:0002489,3.13e-14,6;CL:0000898,3.13e-14,6;CL:0000809,3.13e-14,6;CL:0000810,3.13e-14,6;CL:0000895,3.13e-14,6;CL:0000808,3.13e-14,6;CL:0000894,3.13e-14,6;CL:0000806,3.13e-14,6;CL:0000807,3.13e-14,6;CL:0000805,3.13e-14,6;CL:0002425,3.13e-14,6;CL:0002436,3.13e-14,6;CL:0002427,3.13e-14,6;CL:0002428,3.13e-14,6;CL:0002429,3.13e-14,6;CL:0002433,3.13e-14,6;CL:0002431,3.13e-14,6;CL:0002432,3.13e-14,6;CL:0000034,3.19e-11,97;CL:0000049,2.55e-10,19;CL:0000723,7.14e-09,91;CL:0000048,7.14e-09,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.61e-13!48;UBERON:0002390!1.46e-12!45;UBERON:0003061!1.46e-12!45;UBERON:0002405!8.51e-12!70;UBERON:0004177!1.13e-09!29;UBERON:0003081!1.92e-08!88;UBERON:0005057!4.35e-08!51;UBERON:0006562!2.14e-07!24;UBERON:0001557!2.14e-07!24;UBERON:0001042!2.14e-07!24;UBERON:0008814!2.14e-07!24;UBERON:0009145!2.14e-07!24;UBERON:0002384!2.65e-07!46;UBERON:0003408!2.98e-07!24;UBERON:0002370!5.38e-07!23;UBERON:0000974!5.38e-07!23;UBERON:0004807!5.38e-07!23;UBERON:0005058!5.38e-07!23;UBERON:0003351!5.38e-07!23;UBERON:0009113!5.38e-07!23;UBERON:0003295!5.38e-07!23;UBERON:0009722!5.38e-07!23;UBERON:0005562!5.38e-07!23;UBERON:0007690!5.38e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-19,46;UBERON:0002193,5.20e-14,48;UBERON:0002405,5.20e-14,48;UBERON:0002390,1.23e-13,45;UBERON:0003061,1.23e-13,45;UBERON:0004177,1.33e-08,29;UBERON:0005057,1.33e-08,29|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.90739263392049,1.00179145989269,0.503637815735669,0.934450562382103,2.45334314538995,10.6999428835267,10.5329036844897,4.45166717386313,4.3874687447435,3.0816131387617,1.74840804837995,0.333109761815663,0.809901069559304,0.699561878128147,2.20823515750766,3.01651753932625,2.97072756258621,0.255129870453209,1.29078236561151,0.783599367416806,0.47997726838022,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0,0,0,0.837063261473815,0,1.0470474879476,0.588231488031014,1.36609096991689,1.94204141212461,1.25896817975577,0.912392380975631,0.367093504323363,0,0,0,0,0,0,5.36904339384756,5.07753499407941,3.6970317905671,0.771778308107841,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.454357159999104,0.226714680320357,0.289864488701678,0,2.03991400112325,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0.91347103775248,1.55362730188303,0.742210695324124,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0.494389935468748,0.433798070759735,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,0.878342391034642,0.83778682725382,0.255457055208591,3.71426885968353,2.99951365496704,4.57452817463033,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0.59710280045548,2.80885274925294,2.31613116403244,2.55747149456033,0,0,0,0.23674473558521,0.196764231747404,0,0,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,0.972825714550269,0.584799949701329,0,0.671032093801859,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0,0.77320476793256,0.605050573870028,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.995706366271836,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.442655759869801,0,0.15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| ||
|EntrezGene=20868 | |||
|HGNC= | |||
|MCL_coexpression_id=269 | |||
|UniProt=A1A553,O55098 | |||
|association_with_transcript=-395bp_to_NM_009288,uc007ijt.1,uc007iju.1_5end | |||
|description=CAGE_peak_3_at_Stk10_5end | |||
|id=chr11:32432845..32432870,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.71e-12!32;CL:0002032!2.71e-12!32;CL:0000037!2.71e-12!32;CL:0000566!2.71e-12!32;CL:0000837!2.71e-12!32;CL:0002031!5.74e-09!25;CL:0000838!6.28e-09!12;CL:0000542!2.37e-08!13;CL:0000051!2.37e-08!13;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000738!6.16e-08!17;CL:0002087!6.16e-08!17;CL:0000791!1.94e-07!9;CL:0000789!1.94e-07!9;CL:0002420!1.94e-07!9;CL:0002419!1.94e-07!9;CL:0000790!1.94e-07!9;CL:0002320!2.65e-07!46;CL:0000134!2.65e-07!46;CL:0000624!8.67e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.10e-27,32;CL:0002032,1.10e-27,32;CL:0000037,1.10e-27,32;CL:0000837,1.10e-27,32;CL:0000838,4.93e-22,12;CL:0000791,2.18e-20,9;CL:0000789,2.18e-20,9;CL:0002420,2.18e-20,9;CL:0002419,2.18e-20,9;CL:0000790,2.18e-20,9;CL:0000542,3.86e-20,13;CL:0000051,3.86e-20,13;CL:0000084,8.08e-20,11;CL:0000827,8.08e-20,11;CL:0002320,1.66e-19,46;CL:0000134,1.66e-19,46;CL:0000624,2.59e-18,8;CL:0002031,6.21e-18,25;CL:0000738,8.05e-18,17;CL:0002087,8.05e-18,17;CL:0000219,8.67e-16,54;CL:0000893,3.13e-14,6;CL:0002489,3.13e-14,6;CL:0000898,3.13e-14,6;CL:0000809,3.13e-14,6;CL:0000810,3.13e-14,6;CL:0000895,3.13e-14,6;CL:0000808,3.13e-14,6;CL:0000894,3.13e-14,6;CL:0000806,3.13e-14,6;CL:0000807,3.13e-14,6;CL:0000805,3.13e-14,6;CL:0002425,3.13e-14,6;CL:0002436,3.13e-14,6;CL:0002427,3.13e-14,6;CL:0002428,3.13e-14,6;CL:0002429,3.13e-14,6;CL:0002433,3.13e-14,6;CL:0002431,3.13e-14,6;CL:0002432,3.13e-14,6;CL:0000034,3.19e-11,97;CL:0000049,2.55e-10,19;CL:0000723,7.14e-09,91;CL:0000048,7.14e-09,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.61e-13!48;UBERON:0002390!1.46e-12!45;UBERON:0003061!1.46e-12!45;UBERON:0002405!8.51e-12!70;UBERON:0004177!1.13e-09!29;UBERON:0003081!1.92e-08!88;UBERON:0005057!4.35e-08!51;UBERON:0006562!2.14e-07!24;UBERON:0001557!2.14e-07!24;UBERON:0001042!2.14e-07!24;UBERON:0008814!2.14e-07!24;UBERON:0009145!2.14e-07!24;UBERON:0002384!2.65e-07!46;UBERON:0003408!2.98e-07!24;UBERON:0002370!5.38e-07!23;UBERON:0000974!5.38e-07!23;UBERON:0004807!5.38e-07!23;UBERON:0005058!5.38e-07!23;UBERON:0003351!5.38e-07!23;UBERON:0009113!5.38e-07!23;UBERON:0003295!5.38e-07!23;UBERON:0009722!5.38e-07!23;UBERON:0005562!5.38e-07!23;UBERON:0007690!5.38e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-19,46;UBERON:0002193,5.20e-14,48;UBERON:0002405,5.20e-14,48;UBERON:0002390,1.23e-13,45;UBERON:0003061,1.23e-13,45;UBERON:0004177,1.33e-08,29;UBERON:0005057,1.33e-08,29 | |||
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|short_description=p3@Stk10 | |||
}} |
Revision as of 19:29, 12 September 2013
Short description: | p3@Stk10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stk10_5end |
Coexpression cluster: | MCL_coexpression_mm9:269 |
Association with transcript: | -395bp_to_NM_009288, uc007ijt.1, uc007iju.1_5end |
EntrezGene: | Stk10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.66e-19 | 46 |
hemolymphoid system | 5.20e-14 | 48 |
immune system | 5.20e-14 | 48 |
hematopoietic system | 1.23e-13 | 45 |
blood island | 1.23e-13 | 45 |
hemopoietic organ | 1.33e-08 | 29 |
immune organ | 1.33e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.