FFCP PHASE1:Mm9::chr11:33103563..33103583,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27140|HGNC=|MCL_coexpression_id=249|UniProt=Q5SQB4|association_with_transcript=4bp_to_ENSMUST00000037746,NM_019916,uc007ikg.2_5end|description=CAGE_peak_1_at_Tlx3_5end|id=chr11:33103563..33103583,-|ontology_enrichment_celltype=CL:0000107!4.52e-09!9;CL:0000540!2.29e-08!33;CL:0000047!2.29e-08!33;CL:0000031!2.29e-08!33;CL:0000404!2.29e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.14e-15,33;CL:0000047,1.14e-15,33;CL:0000031,1.14e-15,33;CL:0000404,1.14e-15,33;CL:0000107,6.07e-14,9;CL:0000393,1.41e-12,39;CL:0000211,1.41e-12,39;CL:0002319,5.26e-11,43;CL:0000221,1.17e-10,44;CL:0000133,1.17e-10,44;CL:0002612,4.38e-08,3;CL:0000120,1.33e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.97e-10!11;UBERON:0002410!4.52e-09!9;UBERON:0003076!8.19e-09!12;UBERON:0003057!8.19e-09!12;UBERON:0002240!7.93e-08!6;UBERON:0005174!7.93e-08!6;UBERON:0001137!7.93e-08!6;UBERON:0002342!3.36e-07!10;UBERON:0005062!3.36e-07!10;UBERON:0001948!6.16e-07!5;UBERON:0002315!6.16e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.37e-17,12;UBERON:0003057,3.37e-17,12;UBERON:0002240,3.87e-14,6;UBERON:0005174,3.87e-14,6;UBERON:0001137,3.87e-14,6;UBERON:0002410,6.07e-14,9;UBERON:0001017,1.35e-12,73;UBERON:0001948,2.32e-12,5;UBERON:0002315,2.32e-12,5;UBERON:0001016,4.31e-12,75;UBERON:0000010,3.89e-11,11;UBERON:0004121,2.99e-08,95;UBERON:0000924,2.99e-08,95;UBERON:0006601,2.99e-08,95;UBERON:0002257,4.38e-08,3;UBERON:0000011,5.90e-07,3;UBERON:0010313,6.19e-07,3;UBERON:0002342,6.19e-07,3;UBERON:0002005,6.19e-07,3;UBERON:0005428,6.19e-07,3;UBERON:0005062,6.19e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49729135610311,10.5798195854407,3.80298842103708,0.338844532069132,0,0,0,0,0,0,0,0,0,12.8542942981712,11.7060326704355,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,1.95428099300967,0,0,13.5529149317887,10.6778760599327,35.6022941526324,0.984440513331393,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37804512975021,3.34912026143355,0.922461989024234,1.95939432718409,1.05829836422134,0.125666591329675,0,0,0,0,0,0,0,4.39171195517321,5.86450779077674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.696710015581316,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,2.52406575533005,1.95219372148319,4.95473814785438,1.19484398976276,4.90157082981267,6.51076020814315,0.404810701674894,2.33804686329049,3.55759000151871,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,1.60531935841864,2.79733335023606,1.522324745573,0,0,0.220528398054962,0,0.322928853391811,0,0.596861720015682,0,0,2.96680483216816,0,0,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,1.79427713218951,0.839423081820392,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9916257639816,5.1873233542134,4.78054096111576,0.729320151204882,1.46729213839588,0.735374033800057,0.44449345560323,1.03017528619447,0.320919209591815,0.758091635291392,1.01391719956096,0.943131706930381,0.842773567228942,0.768301828858431,0.746661096422973,0,0.695305955669133,0.578727661391115,1.64834360321323,0.441596760403192,1.71434626192708,1.06485483695602,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,1.09756783723664,0.263069711437843,0.679020569229309,0,0.474540072496697,0.985044823755635,1.22769312950907,0.309873682371932,1.35034627686799,0.749431733813838,0.467863216890817,1.07435527024149,0.956441660344217,0.220591419119515,0.927471342481686|short_description=p1@Tlx3}} | ||
|EntrezGene=27140 | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|UniProt=Q5SQB4 | |||
|association_with_transcript=4bp_to_ENSMUST00000037746,NM_019916,uc007ikg.2_5end | |||
|description=CAGE_peak_1_at_Tlx3_5end | |||
|id=chr11:33103563..33103583,- | |||
|ontology_enrichment_celltype=CL:0000107!4.52e-09!9;CL:0000540!2.29e-08!33;CL:0000047!2.29e-08!33;CL:0000031!2.29e-08!33;CL:0000404!2.29e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.14e-15,33;CL:0000047,1.14e-15,33;CL:0000031,1.14e-15,33;CL:0000404,1.14e-15,33;CL:0000107,6.07e-14,9;CL:0000393,1.41e-12,39;CL:0000211,1.41e-12,39;CL:0002319,5.26e-11,43;CL:0000221,1.17e-10,44;CL:0000133,1.17e-10,44;CL:0002612,4.38e-08,3;CL:0000120,1.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.97e-10!11;UBERON:0002410!4.52e-09!9;UBERON:0003076!8.19e-09!12;UBERON:0003057!8.19e-09!12;UBERON:0002240!7.93e-08!6;UBERON:0005174!7.93e-08!6;UBERON:0001137!7.93e-08!6;UBERON:0002342!3.36e-07!10;UBERON:0005062!3.36e-07!10;UBERON:0001948!6.16e-07!5;UBERON:0002315!6.16e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.37e-17,12;UBERON:0003057,3.37e-17,12;UBERON:0002240,3.87e-14,6;UBERON:0005174,3.87e-14,6;UBERON:0001137,3.87e-14,6;UBERON:0002410,6.07e-14,9;UBERON:0001017,1.35e-12,73;UBERON:0001948,2.32e-12,5;UBERON:0002315,2.32e-12,5;UBERON:0001016,4.31e-12,75;UBERON:0000010,3.89e-11,11;UBERON:0004121,2.99e-08,95;UBERON:0000924,2.99e-08,95;UBERON:0006601,2.99e-08,95;UBERON:0002257,4.38e-08,3;UBERON:0000011,5.90e-07,3;UBERON:0010313,6.19e-07,3;UBERON:0002342,6.19e-07,3;UBERON:0002005,6.19e-07,3;UBERON:0005428,6.19e-07,3;UBERON:0005062,6.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49729135610311,10.5798195854407,3.80298842103708,0.338844532069132,0,0,0,0,0,0,0,0,0,12.8542942981712,11.7060326704355,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,1.95428099300967,0,0,13.5529149317887,10.6778760599327,35.6022941526324,0.984440513331393,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37804512975021,3.34912026143355,0.922461989024234,1.95939432718409,1.05829836422134,0.125666591329675,0,0,0,0,0,0,0,4.39171195517321,5.86450779077674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.696710015581316,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,2.52406575533005,1.95219372148319,4.95473814785438,1.19484398976276,4.90157082981267,6.51076020814315,0.404810701674894,2.33804686329049,3.55759000151871,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,1.60531935841864,2.79733335023606,1.522324745573,0,0,0.220528398054962,0,0.322928853391811,0,0.596861720015682,0,0,2.96680483216816,0,0,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,1.79427713218951,0.839423081820392,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9916257639816,5.1873233542134,4.78054096111576,0.729320151204882,1.46729213839588,0.735374033800057,0.44449345560323,1.03017528619447,0.320919209591815,0.758091635291392,1.01391719956096,0.943131706930381,0.842773567228942,0.768301828858431,0.746661096422973,0,0.695305955669133,0.578727661391115,1.64834360321323,0.441596760403192,1.71434626192708,1.06485483695602,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,1.09756783723664,0.263069711437843,0.679020569229309,0,0.474540072496697,0.985044823755635,1.22769312950907,0.309873682371932,1.35034627686799,0.749431733813838,0.467863216890817,1.07435527024149,0.956441660344217,0.220591419119515,0.927471342481686 | |||
|short_description=p1@Tlx3 | |||
}} |
Revision as of 19:31, 12 September 2013
Short description: | p1@Tlx3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tlx3_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | 4bp_to_ENSMUST00000037746, NM_019916, uc007ikg.2_5end |
EntrezGene: | Tlx3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.14e-15 | 33 |
neuronal stem cell | 1.14e-15 | 33 |
neuroblast | 1.14e-15 | 33 |
electrically signaling cell | 1.14e-15 | 33 |
autonomic neuron | 6.07e-14 | 9 |
electrically responsive cell | 1.41e-12 | 39 |
electrically active cell | 1.41e-12 | 39 |
neural cell | 5.26e-11 | 43 |
ectodermal cell | 1.17e-10 | 44 |
neurectodermal cell | 1.17e-10 | 44 |
neuron of the ventral spinal cord | 4.38e-08 | 3 |
granule cell | 1.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 3.37e-17 | 12 |
chordal neural plate | 3.37e-17 | 12 |
spinal cord | 3.87e-14 | 6 |
dorsal region element | 3.87e-14 | 6 |
dorsum | 3.87e-14 | 6 |
autonomic nervous system | 6.07e-14 | 9 |
central nervous system | 1.35e-12 | 73 |
regional part of spinal cord | 2.32e-12 | 5 |
gray matter of spinal cord | 2.32e-12 | 5 |
nervous system | 4.31e-12 | 75 |
peripheral nervous system | 3.89e-11 | 11 |
ectoderm-derived structure | 2.99e-08 | 95 |
ectoderm | 2.99e-08 | 95 |
presumptive ectoderm | 2.99e-08 | 95 |
ventral horn of spinal cord | 4.38e-08 | 3 |
parasympathetic nervous system | 5.90e-07 | 3 |
neural crest-derived structure | 6.19e-07 | 3 |
neural crest | 6.19e-07 | 3 |
enteric nervous system | 6.19e-07 | 3 |
vagal neural crest | 6.19e-07 | 3 |
neural fold | 6.19e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.