FFCP PHASE1:Hg19::chr2:91815804..91815808,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:91815804..91815808,+|id=chr2:91815804..91815808,+|ontology_enrichment_celltype=CL:0000945!1.69e-08!24;CL:0000826!1.69e-08!24;CL:0002328!9.10e-07!3|ontology_enrichment_celltype_v019=CL:0000946;1.31e-16;1!CL:0002127;1.31e-16;1!CL:0000911;1.31e-16;1!CL:0000814;1.31e-16;1!CL:0000786;1.31e-16;1!CL:0002202;9.84e-08;9!CL:0002632;9.84e-08;9|ontology_enrichment_celltype_v019_2=CL:0002127,1.41e-16,1;CL:0000914,1.41e-16,1;CL:0000911,1.41e-16,1;CL:0000814,1.41e-16,1;CL:0002042,1.41e-16,1;CL:0002039,1.41e-16,1;CL:0002040,1.41e-16,1;CL:0002041,1.41e-16,1;CL:0000946,2.63e-16,1;CL:0000786,2.63e-16,1;CL:0000980,2.63e-16,1;CL:0000893,5.94e-09,2;CL:0002489,5.94e-09,2;CL:0000809,5.94e-09,2;CL:0000808,5.94e-09,2;CL:0000894,5.94e-09,2;CL:0000806,5.94e-09,2;CL:0000807,5.94e-09,2;CL:0000805,5.94e-09,2;CL:0002425,5.94e-09,2;CL:0000785,8.09e-09,2;CL:0000955,8.09e-09,2;CL:0000818,8.09e-09,2;CL:0000954,8.09e-09,2;CL:0000816,8.09e-09,2;CL:0002202,1.13e-07,9;CL:0002632,1.13e-07,9|ontology_enrichment_development_v019=CL:0000954;5.71e-09;2!CL:0002425;5.71e-09;2!UBERON:0008814;5.71e-09;2!UBERON:0010056;5.71e-09;2|ontology_enrichment_disease=DOID:162!2.72e-15!235;DOID:14566!2.73e-15!239;DOID:0060058!1.06e-13!10;DOID:2531!3.05e-09!51;DOID:0060083!3.05e-09!51;DOID:0050687!1.00e-08!143;DOID:0050686!1.97e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004815!9.10e-07!3;UBERON:0002031!9.10e-07!3|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000974,4.52e-07,10;UBERON:0001042,4.52e-07,10;UBERON:0009145,4.52e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0.542270404062111,0.710846162437108,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.69716365721711,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0.569261198172555,0.476809736941136,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.547364367646998,0.391329237864179,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.483781656445426,0.0730893170861856,0,0,0,0,1.09633539717401,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.592834895693833,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0.499921631848426,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.02496607435179,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0.39997479170986,0,0.861074898304078,0,0.184105950251841,0,0,0,0,0.471797825567689,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.03710588800201,0,0,0,0.590969204419841,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,1.52971800749174,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr2:91815804..91815808,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:91815804..91815808,+ | |||
|id=chr2:91815804..91815808,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.69e-08!24;CL:0000826!1.69e-08!24;CL:0002328!9.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.31e-16;1!CL:0002127;1.31e-16;1!CL:0000911;1.31e-16;1!CL:0000814;1.31e-16;1!CL:0000786;1.31e-16;1!CL:0002202;9.84e-08;9!CL:0002632;9.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.41e-16,1;CL:0000914,1.41e-16,1;CL:0000911,1.41e-16,1;CL:0000814,1.41e-16,1;CL:0002042,1.41e-16,1;CL:0002039,1.41e-16,1;CL:0002040,1.41e-16,1;CL:0002041,1.41e-16,1;CL:0000946,2.63e-16,1;CL:0000786,2.63e-16,1;CL:0000980,2.63e-16,1;CL:0000893,5.94e-09,2;CL:0002489,5.94e-09,2;CL:0000809,5.94e-09,2;CL:0000808,5.94e-09,2;CL:0000894,5.94e-09,2;CL:0000806,5.94e-09,2;CL:0000807,5.94e-09,2;CL:0000805,5.94e-09,2;CL:0002425,5.94e-09,2;CL:0000785,8.09e-09,2;CL:0000955,8.09e-09,2;CL:0000818,8.09e-09,2;CL:0000954,8.09e-09,2;CL:0000816,8.09e-09,2;CL:0002202,1.13e-07,9;CL:0002632,1.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000954;5.71e-09;2!CL:0002425;5.71e-09;2!UBERON:0008814;5.71e-09;2!UBERON:0010056;5.71e-09;2 | |||
|ontology_enrichment_disease=DOID:162!2.72e-15!235;DOID:14566!2.73e-15!239;DOID:0060058!1.06e-13!10;DOID:2531!3.05e-09!51;DOID:0060083!3.05e-09!51;DOID:0050687!1.00e-08!143;DOID:0050686!1.97e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!9.10e-07!3;UBERON:0002031!9.10e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,4.52e-07,10;UBERON:0001042,4.52e-07,10;UBERON:0009145,4.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0.542270404062111,0.710846162437108,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.69716365721711,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0.569261198172555,0.476809736941136,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.547364367646998,0.391329237864179,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.483781656445426,0.0730893170861856,0,0,0,0,1.09633539717401,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.592834895693833,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0.499921631848426,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.02496607435179,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0.39997479170986,0,0.861074898304078,0,0.184105950251841,0,0,0,0,0.471797825567689,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.03710588800201,0,0,0,0.590969204419841,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,1.52971800749174,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:91815804..91815808,+ | |||
}} |
Revision as of 20:11, 12 September 2013
Short description: | p@chr2:91815804..91815808, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:91815804..91815808, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.41e-16 | 1 |
immature NK T cell | 1.41e-16 | 1 |
effector T cell | 1.41e-16 | 1 |
mature NK T cell | 1.41e-16 | 1 |
immature NK T cell stage IV | 1.41e-16 | 1 |
immature NK T cell stage I | 1.41e-16 | 1 |
immature NK T cell stage II | 1.41e-16 | 1 |
immature NK T cell stage III | 1.41e-16 | 1 |
antibody secreting cell | 2.63e-16 | 1 |
plasma cell | 2.63e-16 | 1 |
plasmablast | 2.63e-16 | 1 |
thymocyte | 5.94e-09 | 2 |
double negative thymocyte | 5.94e-09 | 2 |
double-positive, alpha-beta thymocyte | 5.94e-09 | 2 |
DN4 thymocyte | 5.94e-09 | 2 |
DN1 thymic pro-T cell | 5.94e-09 | 2 |
DN2 thymocyte | 5.94e-09 | 2 |
DN3 thymocyte | 5.94e-09 | 2 |
immature single positive thymocyte | 5.94e-09 | 2 |
early T lineage precursor | 5.94e-09 | 2 |
mature B cell | 8.09e-09 | 2 |
pre-B-II cell | 8.09e-09 | 2 |
transitional stage B cell | 8.09e-09 | 2 |
small pre-B-II cell | 8.09e-09 | 2 |
immature B cell | 8.09e-09 | 2 |
epithelial cell of tracheobronchial tree | 1.13e-07 | 9 |
epithelial cell of lower respiratory tract | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neck | 4.52e-07 | 10 |
chordate pharynx | 4.52e-07 | 10 |
pharyngeal region of foregut | 4.52e-07 | 10 |
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