FFCP PHASE1:Mm9::chr11:70323193..70323295,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75604|HGNC=|MCL_coexpression_id=191|UniProt=|association_with_transcript=-412bp_to_ENSMUST00000141924_5end|description=CAGE_peak_3_at_Tm4sf5_5end|id=chr11:70323193..70323295,+|ontology_enrichment_celltype=CL:0002563!5.94e-11!9;CL:0002251!5.94e-11!9;CL:0000239!1.10e-08!6;CL:0000677!1.10e-08!6;CL:0000212!1.10e-08!6;CL:0000584!1.10e-08!6;CL:0000075!3.06e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.86e-17,6;CL:0000677,2.86e-17,6;CL:0000584,2.86e-17,6;CL:0000075,1.05e-14,7;CL:0002563,2.79e-11,9;CL:0002251,2.79e-11,9;CL:0000682,7.57e-10,3;CL:0000066,4.17e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.52e-19!43;UBERON:0000344!3.71e-18!15;UBERON:0001242!1.43e-15!13;UBERON:0000060!1.43e-15!13;UBERON:0001262!1.43e-15!13;UBERON:0004786!1.43e-15!13;UBERON:0005409!6.71e-15!59;UBERON:0003350!5.94e-11!9;UBERON:0004808!5.94e-11!9;UBERON:0001277!5.94e-11!9;UBERON:0004923!1.85e-09!24;UBERON:0000485!1.68e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-47,31;UBERON:0005409,4.12e-29,47;UBERON:0000344,5.75e-26,15;UBERON:0001242,1.27e-20,13;UBERON:0001262,1.27e-20,13;UBERON:0004786,1.27e-20,13;UBERON:0004923,2.97e-15,24;UBERON:0003350,2.79e-11,9;UBERON:0004808,2.79e-11,9;UBERON:0001277,2.79e-11,9;UBERON:0002108,2.99e-11,4;UBERON:0001007,5.27e-11,116;UBERON:0001555,5.27e-11,116;UBERON:0007026,5.27e-11,116;UBERON:0004119,1.00e-10,118;UBERON:0000925,1.00e-10,118;UBERON:0006595,1.00e-10,118;UBERON:0000485,4.24e-09,11;UBERON:0004921,5.70e-09,114;UBERON:0000331,5.94e-09,3;UBERON:0002116,5.94e-09,3;UBERON:0001204,5.94e-09,3;UBERON:0001168,5.94e-09,3;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2|phase1_expression=0,112.370081259874,132.404778662355,42.9499180055699,44.5797199652249,13.9339795686869,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.7553703267715,111.722319879712,109.104073181854,83.9985892510196,62.2711862462219,40.2849649247513,29.7395553116718,12.1951780860418,0,0,0,0.866554859253824,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,48.0259263792152,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.0925002478082,43.8987940661483,0,0,0.128867461322093,1.61346819698674,5.55945109612176,7.98947629672748,15.6594590309689,16.3051965176771,11.0587491872119,7.95825888164603,5.45899443933536,20.6728463990471,20.3169766882213,23.6978115172697,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0,0.943131706930381,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.811190281613988,0.192909220463705,0.412085900803307,0.294397840268795,1.37147700954166,0,0,0.290692833264657,0.564656282491984,0.169229215783353,0.182927972872773,0.789209134313529,0.814824683075171,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.214871054048298,0,0,0|short_description=p3@Tm4sf5}} | ||
|EntrezGene=75604 | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt= | |||
|association_with_transcript=-412bp_to_ENSMUST00000141924_5end | |||
|description=CAGE_peak_3_at_Tm4sf5_5end | |||
|id=chr11:70323193..70323295,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.94e-11!9;CL:0002251!5.94e-11!9;CL:0000239!1.10e-08!6;CL:0000677!1.10e-08!6;CL:0000212!1.10e-08!6;CL:0000584!1.10e-08!6;CL:0000075!3.06e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.86e-17,6;CL:0000677,2.86e-17,6;CL:0000584,2.86e-17,6;CL:0000075,1.05e-14,7;CL:0002563,2.79e-11,9;CL:0002251,2.79e-11,9;CL:0000682,7.57e-10,3;CL:0000066,4.17e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.52e-19!43;UBERON:0000344!3.71e-18!15;UBERON:0001242!1.43e-15!13;UBERON:0000060!1.43e-15!13;UBERON:0001262!1.43e-15!13;UBERON:0004786!1.43e-15!13;UBERON:0005409!6.71e-15!59;UBERON:0003350!5.94e-11!9;UBERON:0004808!5.94e-11!9;UBERON:0001277!5.94e-11!9;UBERON:0004923!1.85e-09!24;UBERON:0000485!1.68e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-47,31;UBERON:0005409,4.12e-29,47;UBERON:0000344,5.75e-26,15;UBERON:0001242,1.27e-20,13;UBERON:0001262,1.27e-20,13;UBERON:0004786,1.27e-20,13;UBERON:0004923,2.97e-15,24;UBERON:0003350,2.79e-11,9;UBERON:0004808,2.79e-11,9;UBERON:0001277,2.79e-11,9;UBERON:0002108,2.99e-11,4;UBERON:0001007,5.27e-11,116;UBERON:0001555,5.27e-11,116;UBERON:0007026,5.27e-11,116;UBERON:0004119,1.00e-10,118;UBERON:0000925,1.00e-10,118;UBERON:0006595,1.00e-10,118;UBERON:0000485,4.24e-09,11;UBERON:0004921,5.70e-09,114;UBERON:0000331,5.94e-09,3;UBERON:0002116,5.94e-09,3;UBERON:0001204,5.94e-09,3;UBERON:0001168,5.94e-09,3;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2 | |||
|phase1_expression=0,112.370081259874,132.404778662355,42.9499180055699,44.5797199652249,13.9339795686869,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.7553703267715,111.722319879712,109.104073181854,83.9985892510196,62.2711862462219,40.2849649247513,29.7395553116718,12.1951780860418,0,0,0,0.866554859253824,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,48.0259263792152,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.0925002478082,43.8987940661483,0,0,0.128867461322093,1.61346819698674,5.55945109612176,7.98947629672748,15.6594590309689,16.3051965176771,11.0587491872119,7.95825888164603,5.45899443933536,20.6728463990471,20.3169766882213,23.6978115172697,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0,0.943131706930381,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.811190281613988,0.192909220463705,0.412085900803307,0.294397840268795,1.37147700954166,0,0,0.290692833264657,0.564656282491984,0.169229215783353,0.182927972872773,0.789209134313529,0.814824683075171,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p3@Tm4sf5 | |||
}} |
Revision as of 20:44, 12 September 2013
Short description: | p3@Tm4sf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tm4sf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | -412bp_to_ENSMUST00000141924_5end |
EntrezGene: | Tm4sf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.86e-17 | 6 |
gut absorptive cell | 2.86e-17 | 6 |
enterocyte | 2.86e-17 | 6 |
columnar/cuboidal epithelial cell | 1.05e-14 | 7 |
intestinal epithelial cell | 2.79e-11 | 9 |
epithelial cell of alimentary canal | 2.79e-11 | 9 |
M cell of gut | 7.57e-10 | 3 |
epithelial cell | 4.17e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.04e-47 | 31 |
gastrointestinal system | 4.12e-29 | 47 |
mucosa | 5.75e-26 | 15 |
intestinal mucosa | 1.27e-20 | 13 |
wall of intestine | 1.27e-20 | 13 |
gastrointestinal system mucosa | 1.27e-20 | 13 |
organ component layer | 2.97e-15 | 24 |
epithelium of mucosa | 2.79e-11 | 9 |
gastrointestinal system epithelium | 2.79e-11 | 9 |
intestinal epithelium | 2.79e-11 | 9 |
small intestine | 2.99e-11 | 4 |
digestive system | 5.27e-11 | 116 |
digestive tract | 5.27e-11 | 116 |
primitive gut | 5.27e-11 | 116 |
endoderm-derived structure | 1.00e-10 | 118 |
endoderm | 1.00e-10 | 118 |
presumptive endoderm | 1.00e-10 | 118 |
simple columnar epithelium | 4.24e-09 | 11 |
subdivision of digestive tract | 5.70e-09 | 114 |
ileal mucosa | 5.94e-09 | 3 |
ileum | 5.94e-09 | 3 |
mucosa of small intestine | 5.94e-09 | 3 |
wall of small intestine | 5.94e-09 | 3 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.