FFCP PHASE1:Mm9::chr12:114660446..114660482,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=372|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114660446..114660482,-|id=chr12:114660446..114660482,-|ontology_enrichment_celltype=CL:0000988!5.54e-08!32;CL:0002032!5.54e-08!32;CL:0000037!5.54e-08!32;CL:0000566!5.54e-08!32;CL:0000837!5.54e-08!32;CL:0000553!2.70e-07!6;CL:0000556!2.70e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,9.81e-15,6;CL:0000556,9.81e-15,6;CL:0002031,1.02e-12,25;CL:0000050,1.63e-09,9;CL:0000988,2.91e-09,32;CL:0002032,2.91e-09,32;CL:0000037,2.91e-09,32;CL:0000837,2.91e-09,32;CL:0002027,4.06e-08,3;CL:0002006,4.06e-08,3;CL:0002024,4.06e-08,3;CL:0000838,8.18e-08,12;CL:0000542,3.93e-07,13;CL:0000051,3.93e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.34e-12!48;UBERON:0002390!3.58e-10!45;UBERON:0003061!3.58e-10!45;UBERON:0002405!4.86e-10!70;UBERON:0004177!8.24e-09!29;UBERON:0003081!4.30e-07!88;UBERON:0002370!4.79e-07!23;UBERON:0000974!4.79e-07!23;UBERON:0004807!4.79e-07!23;UBERON:0005058!4.79e-07!23;UBERON:0003351!4.79e-07!23;UBERON:0009113!4.79e-07!23;UBERON:0003295!4.79e-07!23;UBERON:0009722!4.79e-07!23;UBERON:0005562!4.79e-07!23;UBERON:0007690!4.79e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-17,48;UBERON:0002405,1.32e-17,48;UBERON:0002390,2.03e-13,45;UBERON:0003061,2.03e-13,45;UBERON:0003081,9.35e-10,87;UBERON:0004177,1.63e-09,29;UBERON:0005057,1.63e-09,29;UBERON:0000077,9.12e-09,35;UBERON:0002465,6.16e-08,3;UBERON:0001474,4.91e-07,22;UBERON:0004765,4.91e-07,22;UBERON:0001434,4.91e-07,22|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.84473233291,0.234064526321993,0,0,1.54080656938085,0.611942816932982,23.6507930889121,35.2306965258297,12.5921138063066,41.9564679926456,39.351842444847,9.76096199135469,0.595303031057488,3.97163804803541,1.56719873483361,13.759348360233,5.04700418347774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,13.4226084846189,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,19.6792791571851,0,0,0,0,0,0,0.125666591329675,0,1.3013942122792,3.5384422077995,0.323533699894818,1.10420759230197,2.42437626567611,0,0,0,0.255457055208591,0.718890747035522,0.599902730993408,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0,1.36847667671102,0,1.05220927943237,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,1.3173006917463,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,5.30980553359851,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.882113592219848,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,38.275077298719,0,0,2.0720530270516,4.78429797023588,8.00723606222829,0.339956859987711,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.102710957164827,0.909445760844565,1.25318686967237,1.58945083825012,1.32214994471966,0.738447635872886,0.807731599585181,0.914481679859998,1.20991422164209,1.55932609183604,2.21287235772758,1.16876902181569,0,0,0,0,2.51146472241848,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.927471342481686|short_description=p@chr12:114660446..114660482,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114660446..114660482,- | |||
|id=chr12:114660446..114660482,- | |||
|ontology_enrichment_celltype=CL:0000988!5.54e-08!32;CL:0002032!5.54e-08!32;CL:0000037!5.54e-08!32;CL:0000566!5.54e-08!32;CL:0000837!5.54e-08!32;CL:0000553!2.70e-07!6;CL:0000556!2.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.81e-15,6;CL:0000556,9.81e-15,6;CL:0002031,1.02e-12,25;CL:0000050,1.63e-09,9;CL:0000988,2.91e-09,32;CL:0002032,2.91e-09,32;CL:0000037,2.91e-09,32;CL:0000837,2.91e-09,32;CL:0002027,4.06e-08,3;CL:0002006,4.06e-08,3;CL:0002024,4.06e-08,3;CL:0000838,8.18e-08,12;CL:0000542,3.93e-07,13;CL:0000051,3.93e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.34e-12!48;UBERON:0002390!3.58e-10!45;UBERON:0003061!3.58e-10!45;UBERON:0002405!4.86e-10!70;UBERON:0004177!8.24e-09!29;UBERON:0003081!4.30e-07!88;UBERON:0002370!4.79e-07!23;UBERON:0000974!4.79e-07!23;UBERON:0004807!4.79e-07!23;UBERON:0005058!4.79e-07!23;UBERON:0003351!4.79e-07!23;UBERON:0009113!4.79e-07!23;UBERON:0003295!4.79e-07!23;UBERON:0009722!4.79e-07!23;UBERON:0005562!4.79e-07!23;UBERON:0007690!4.79e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-17,48;UBERON:0002405,1.32e-17,48;UBERON:0002390,2.03e-13,45;UBERON:0003061,2.03e-13,45;UBERON:0003081,9.35e-10,87;UBERON:0004177,1.63e-09,29;UBERON:0005057,1.63e-09,29;UBERON:0000077,9.12e-09,35;UBERON:0002465,6.16e-08,3;UBERON:0001474,4.91e-07,22;UBERON:0004765,4.91e-07,22;UBERON:0001434,4.91e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.84473233291,0.234064526321993,0,0,1.54080656938085,0.611942816932982,23.6507930889121,35.2306965258297,12.5921138063066,41.9564679926456,39.351842444847,9.76096199135469,0.595303031057488,3.97163804803541,1.56719873483361,13.759348360233,5.04700418347774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,13.4226084846189,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,19.6792791571851,0,0,0,0,0,0,0.125666591329675,0,1.3013942122792,3.5384422077995,0.323533699894818,1.10420759230197,2.42437626567611,0,0,0,0.255457055208591,0.718890747035522,0.599902730993408,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0,1.36847667671102,0,1.05220927943237,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,1.3173006917463,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,5.30980553359851,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.882113592219848,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,38.275077298719,0,0,2.0720530270516,4.78429797023588,8.00723606222829,0.339956859987711,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.102710957164827,0.909445760844565,1.25318686967237,1.58945083825012,1.32214994471966,0.738447635872886,0.807731599585181,0.914481679859998,1.20991422164209,1.55932609183604,2.21287235772758,1.16876902181569,0,0,0,0,2.51146472241848,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.927471342481686 | |||
|short_description=p@chr12:114660446..114660482,- | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p@chr12:114660446..114660482, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660446..114660482, - |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.81e-15 | 6 |
megakaryocyte | 9.81e-15 | 6 |
hematopoietic lineage restricted progenitor cell | 1.02e-12 | 25 |
megakaryocyte-erythroid progenitor cell | 1.63e-09 | 9 |
hematopoietic cell | 2.91e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.91e-09 | 32 |
hematopoietic stem cell | 2.91e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.91e-09 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 4.06e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.06e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.06e-08 | 3 |
lymphoid lineage restricted progenitor cell | 8.18e-08 | 12 |
lymphocyte | 3.93e-07 | 13 |
common lymphoid progenitor | 3.93e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.32e-17 | 48 |
immune system | 1.32e-17 | 48 |
hematopoietic system | 2.03e-13 | 45 |
blood island | 2.03e-13 | 45 |
lateral plate mesoderm | 9.35e-10 | 87 |
hemopoietic organ | 1.63e-09 | 29 |
immune organ | 1.63e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 9.12e-09 | 35 |
lymphoid system | 6.16e-08 | 3 |
bone element | 4.91e-07 | 22 |
skeletal element | 4.91e-07 | 22 |
skeletal system | 4.91e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.