FFCP PHASE1:Mm9::chr12:31758879..31758895,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104943|HGNC=|UniProt=Q8VE94|association_with_transcript=46bp_to_ENSMUST00000041133,NM_027828,uc007nhb.1_5end|description=CAGE_peak_2_at_Fam110c_5end|id=chr12:31758879..31758895,+|ontology_enrichment_celltype=CL:0002563!5.51e-08!9;CL:0002251!5.51e-08!9;CL:0002076!4.44e-07!15|ontology_enrichment_celltype_v019_2=CL:0002076,2.00e-15,15;CL:0002563,3.09e-15,9;CL:0002251,3.09e-15,9;CL:0000066,4.74e-15,25;CL:0000223,1.57e-12,20;CL:0000239,1.74e-11,6;CL:0000677,1.74e-11,6;CL:0000584,1.74e-11,6;CL:0000075,1.09e-09,7;CL:0000222,4.15e-08,7;CL:0000680,5.19e-07,6;CL:0000187,5.19e-07,6;CL:0000056,5.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.34e-19!43;UBERON:0005409!1.13e-17!59;UBERON:0001007!2.69e-12!128;UBERON:0001555!2.69e-12!128;UBERON:0007026!2.69e-12!128;UBERON:0004119!2.80e-12!130;UBERON:0000925!2.80e-12!130;UBERON:0006595!2.80e-12!130;UBERON:0000344!5.76e-12!15;UBERON:0004921!2.04e-11!126;UBERON:0004185!2.04e-11!126;UBERON:0001242!6.32e-11!13;UBERON:0000060!6.32e-11!13;UBERON:0001262!6.32e-11!13;UBERON:0004786!6.32e-11!13;UBERON:0003350!5.51e-08!9;UBERON:0004808!5.51e-08!9;UBERON:0001277!5.51e-08!9;UBERON:0002108!7.60e-08!16;UBERON:0004923!3.72e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.03e-23,15;UBERON:0001242,1.71e-21,13;UBERON:0001262,1.71e-21,13;UBERON:0004786,1.71e-21,13;UBERON:0000160,5.94e-20,31;UBERON:0005409,2.23e-15,47;UBERON:0003350,3.09e-15,9;UBERON:0004808,3.09e-15,9;UBERON:0001277,3.09e-15,9;UBERON:0004923,3.08e-13,24;UBERON:0000485,4.49e-12,11;UBERON:0001007,1.54e-10,116;UBERON:0001555,1.54e-10,116;UBERON:0007026,1.54e-10,116;UBERON:0004119,3.34e-10,118;UBERON:0000925,3.34e-10,118;UBERON:0006595,3.34e-10,118;UBERON:0004921,2.61e-09,114;UBERON:0002108,2.16e-07,4|phase1_expression=0,20.2405736430829,10.9199817453489,18.4503168897166,20.0358291978539,3.18970616632591,5.13947809310157,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.91990907352088,1.37645568640302,12.6331032105304,5.1691439539089,5.38678081714723,8.7410772949932,4.53654233567875,3.10422714917427,0,0,0,4.62162591602039,1.49611180822643,2.45003227514843,0,0,0,0,0,0,2.01434908760924,1.72340783073175,12.664725899156,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,2.57880095944881,14.4388185837684,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.529000920747499,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,6.49473123033642,7.60079596425296,8.59391556525132,0.79928715803342,0,0,0,0,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,0,0,2.81002760729451,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.925602677324269,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,11.2342386214491,1.85115396664481,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0.760902504450237,2.84717436926707,0,0.502670417600539,0.994782360205754,0.779856348476481,3.59527763461689,3.02593269824572,4.58024928485045,0,0,0,0,0,0.280543279561274,0.569128834118316,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.482354319504834,1.01850340712568,0.575392274901621,1.29708181420028,1.09824565275233,0,2.23284568601102,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0.325929952884052,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0,0,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.977321756121456,0.494910368917606,2.65490276679926,0.485561272309963,0.604647113929502,1.32023555829129,1.77181135728464,0.614870295887855,1.03371317267288,0,1.06949213515416,0.316036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,1.10264199027481,0.32977250588296,0.322928853391811,0.542816324353403,0.238744688006273,0.164140899745061,2.91480836629851,0,0,0.412773735926445,0,0,0,0,8.15896463970505,6.71766971153558,4.28419918793714,3.81868247206045,0,0,0.108005340821801,0.836353184057875,0.436725127492355,0.134864346384821,0.991841468704031,2.09404753587224,5.05498395837992,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,2.12508553435409,2.43987218086537,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0,0,0,0,0.25347929989024,0,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p2@Fam110c}} | ||
|EntrezGene=104943 | |||
|HGNC= | |||
|UniProt=Q8VE94 | |||
|association_with_transcript=46bp_to_ENSMUST00000041133,NM_027828,uc007nhb.1_5end | |||
|description=CAGE_peak_2_at_Fam110c_5end | |||
|id=chr12:31758879..31758895,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.51e-08!9;CL:0002251!5.51e-08!9;CL:0002076!4.44e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.00e-15,15;CL:0002563,3.09e-15,9;CL:0002251,3.09e-15,9;CL:0000066,4.74e-15,25;CL:0000223,1.57e-12,20;CL:0000239,1.74e-11,6;CL:0000677,1.74e-11,6;CL:0000584,1.74e-11,6;CL:0000075,1.09e-09,7;CL:0000222,4.15e-08,7;CL:0000680,5.19e-07,6;CL:0000187,5.19e-07,6;CL:0000056,5.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.34e-19!43;UBERON:0005409!1.13e-17!59;UBERON:0001007!2.69e-12!128;UBERON:0001555!2.69e-12!128;UBERON:0007026!2.69e-12!128;UBERON:0004119!2.80e-12!130;UBERON:0000925!2.80e-12!130;UBERON:0006595!2.80e-12!130;UBERON:0000344!5.76e-12!15;UBERON:0004921!2.04e-11!126;UBERON:0004185!2.04e-11!126;UBERON:0001242!6.32e-11!13;UBERON:0000060!6.32e-11!13;UBERON:0001262!6.32e-11!13;UBERON:0004786!6.32e-11!13;UBERON:0003350!5.51e-08!9;UBERON:0004808!5.51e-08!9;UBERON:0001277!5.51e-08!9;UBERON:0002108!7.60e-08!16;UBERON:0004923!3.72e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.03e-23,15;UBERON:0001242,1.71e-21,13;UBERON:0001262,1.71e-21,13;UBERON:0004786,1.71e-21,13;UBERON:0000160,5.94e-20,31;UBERON:0005409,2.23e-15,47;UBERON:0003350,3.09e-15,9;UBERON:0004808,3.09e-15,9;UBERON:0001277,3.09e-15,9;UBERON:0004923,3.08e-13,24;UBERON:0000485,4.49e-12,11;UBERON:0001007,1.54e-10,116;UBERON:0001555,1.54e-10,116;UBERON:0007026,1.54e-10,116;UBERON:0004119,3.34e-10,118;UBERON:0000925,3.34e-10,118;UBERON:0006595,3.34e-10,118;UBERON:0004921,2.61e-09,114;UBERON:0002108,2.16e-07,4 | |||
|phase1_expression=0,20.2405736430829,10.9199817453489,18.4503168897166,20.0358291978539,3.18970616632591,5.13947809310157,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.91990907352088,1.37645568640302,12.6331032105304,5.1691439539089,5.38678081714723,8.7410772949932,4.53654233567875,3.10422714917427,0,0,0,4.62162591602039,1.49611180822643,2.45003227514843,0,0,0,0,0,0,2.01434908760924,1.72340783073175,12.664725899156,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,2.57880095944881,14.4388185837684,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.529000920747499,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,6.49473123033642,7.60079596425296,8.59391556525132,0.79928715803342,0,0,0,0,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,0,0,2.81002760729451,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.925602677324269,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,11.2342386214491,1.85115396664481,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0.760902504450237,2.84717436926707,0,0.502670417600539,0.994782360205754,0.779856348476481,3.59527763461689,3.02593269824572,4.58024928485045,0,0,0,0,0,0.280543279561274,0.569128834118316,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.482354319504834,1.01850340712568,0.575392274901621,1.29708181420028,1.09824565275233,0,2.23284568601102,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0.325929952884052,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0,0,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.977321756121456,0.494910368917606,2.65490276679926,0.485561272309963,0.604647113929502,1.32023555829129,1.77181135728464,0.614870295887855,1.03371317267288,0,1.06949213515416,0.316036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,1.10264199027481,0.32977250588296,0.322928853391811,0.542816324353403,0.238744688006273,0.164140899745061,2.91480836629851,0,0,0.412773735926445,0,0,0,0,8.15896463970505,6.71766971153558,4.28419918793714,3.81868247206045,0,0,0.108005340821801,0.836353184057875,0.436725127492355,0.134864346384821,0.991841468704031,2.09404753587224,5.05498395837992,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,2.12508553435409,2.43987218086537,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0,0,0,0,0.25347929989024,0,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Fam110c | |||
}} |
Revision as of 22:41, 12 September 2013
Short description: | p2@Fam110c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam110c_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENSMUST00000041133, NM_027828, uc007nhb.1_5end |
EntrezGene: | Fam110c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.00e-15 | 15 |
intestinal epithelial cell | 3.09e-15 | 9 |
epithelial cell of alimentary canal | 3.09e-15 | 9 |
epithelial cell | 4.74e-15 | 25 |
endodermal cell | 1.57e-12 | 20 |
brush border epithelial cell | 1.74e-11 | 6 |
gut absorptive cell | 1.74e-11 | 6 |
enterocyte | 1.74e-11 | 6 |
columnar/cuboidal epithelial cell | 1.09e-09 | 7 |
mesodermal cell | 4.15e-08 | 7 |
muscle precursor cell | 5.19e-07 | 6 |
muscle cell | 5.19e-07 | 6 |
myoblast | 5.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.03e-23 | 15 |
intestinal mucosa | 1.71e-21 | 13 |
wall of intestine | 1.71e-21 | 13 |
gastrointestinal system mucosa | 1.71e-21 | 13 |
intestine | 5.94e-20 | 31 |
gastrointestinal system | 2.23e-15 | 47 |
epithelium of mucosa | 3.09e-15 | 9 |
gastrointestinal system epithelium | 3.09e-15 | 9 |
intestinal epithelium | 3.09e-15 | 9 |
organ component layer | 3.08e-13 | 24 |
simple columnar epithelium | 4.49e-12 | 11 |
digestive system | 1.54e-10 | 116 |
digestive tract | 1.54e-10 | 116 |
primitive gut | 1.54e-10 | 116 |
endoderm-derived structure | 3.34e-10 | 118 |
endoderm | 3.34e-10 | 118 |
presumptive endoderm | 3.34e-10 | 118 |
subdivision of digestive tract | 2.61e-09 | 114 |
small intestine | 2.16e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.