FFCP PHASE1:Mm9::chr12:85777422..85777462,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:85777422..85777462,-|id=chr12:85777422..85777462,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.66e-11!25;UBERON:0002330!2.66e-11!25;UBERON:0005172!8.44e-11!49;UBERON:0005173!8.44e-11!49;UBERON:0002417!8.44e-11!49;UBERON:0000916!8.44e-11!49;UBERON:0003914!1.09e-10!47;UBERON:0002107!1.16e-10!22;UBERON:0007499!1.16e-10!22;UBERON:0006925!1.16e-10!22;UBERON:0009497!1.16e-10!22;UBERON:0000015!1.16e-10!22;UBERON:0002423!1.16e-10!22;UBERON:0006235!1.16e-10!22;UBERON:0008835!1.16e-10!22;UBERON:0003894!1.16e-10!22;UBERON:0004161!1.16e-10!22;UBERON:0008836!1.16e-10!22;UBERON:0005256!1.42e-10!47;UBERON:0009854!7.17e-10!23;UBERON:0009856!7.17e-10!23;UBERON:0009569!1.67e-08!66;UBERON:0002100!2.16e-08!98;UBERON:0005177!7.01e-08!85|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.40e-12,25;UBERON:0002330,7.40e-12,25;UBERON:0002107,6.57e-11,22;UBERON:0007499,6.57e-11,22;UBERON:0006925,6.57e-11,22;UBERON:0009497,6.57e-11,22;UBERON:0000015,6.57e-11,22;UBERON:0002423,6.57e-11,22;UBERON:0006235,6.57e-11,22;UBERON:0008835,6.57e-11,22;UBERON:0003894,6.57e-11,22;UBERON:0004161,6.57e-11,22;UBERON:0008836,6.57e-11,22;UBERON:0009854,2.20e-10,23;UBERON:0009856,2.20e-10,23;UBERON:0005172,9.42e-10,49;UBERON:0005173,9.42e-10,49;UBERON:0002417,9.42e-10,49;UBERON:0000916,9.42e-10,49;UBERON:0005256,5.54e-09,45;UBERON:0003104,8.90e-09,61;UBERON:0009142,8.90e-09,61;UBERON:0005177,1.27e-08,79;UBERON:0010147,1.35e-08,2;UBERON:0003937,1.35e-08,2;UBERON:0005399,1.35e-08,2;UBERON:0002100,2.20e-08,90;UBERON:0003914,5.29e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,5.439770669662,0.539703191637817,0.649776417447669,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,1.73519228303894,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,2.04365644166873,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,1.47610147979602,0.627994911365499,1.85095745882701,2.37162101669719,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,9.07957269940198,0.549122826376163,10.0637744569148,10.0478055870496,1.87222603868736,0.252578877947112,0.538192240565737,6.75420929908714,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.329940245945071,5.30980553359851,0,0,0,0,0.307435147943927,0,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,1.32317038832977,0,0.161464426695906,0.0603129249281559,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.269728692769641,0.165306911450672,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0.214368379079066,2.00628841614145,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p@chr12:85777422..85777462,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:85777422..85777462,- | |||
|id=chr12:85777422..85777462,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.66e-11!25;UBERON:0002330!2.66e-11!25;UBERON:0005172!8.44e-11!49;UBERON:0005173!8.44e-11!49;UBERON:0002417!8.44e-11!49;UBERON:0000916!8.44e-11!49;UBERON:0003914!1.09e-10!47;UBERON:0002107!1.16e-10!22;UBERON:0007499!1.16e-10!22;UBERON:0006925!1.16e-10!22;UBERON:0009497!1.16e-10!22;UBERON:0000015!1.16e-10!22;UBERON:0002423!1.16e-10!22;UBERON:0006235!1.16e-10!22;UBERON:0008835!1.16e-10!22;UBERON:0003894!1.16e-10!22;UBERON:0004161!1.16e-10!22;UBERON:0008836!1.16e-10!22;UBERON:0005256!1.42e-10!47;UBERON:0009854!7.17e-10!23;UBERON:0009856!7.17e-10!23;UBERON:0009569!1.67e-08!66;UBERON:0002100!2.16e-08!98;UBERON:0005177!7.01e-08!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.40e-12,25;UBERON:0002330,7.40e-12,25;UBERON:0002107,6.57e-11,22;UBERON:0007499,6.57e-11,22;UBERON:0006925,6.57e-11,22;UBERON:0009497,6.57e-11,22;UBERON:0000015,6.57e-11,22;UBERON:0002423,6.57e-11,22;UBERON:0006235,6.57e-11,22;UBERON:0008835,6.57e-11,22;UBERON:0003894,6.57e-11,22;UBERON:0004161,6.57e-11,22;UBERON:0008836,6.57e-11,22;UBERON:0009854,2.20e-10,23;UBERON:0009856,2.20e-10,23;UBERON:0005172,9.42e-10,49;UBERON:0005173,9.42e-10,49;UBERON:0002417,9.42e-10,49;UBERON:0000916,9.42e-10,49;UBERON:0005256,5.54e-09,45;UBERON:0003104,8.90e-09,61;UBERON:0009142,8.90e-09,61;UBERON:0005177,1.27e-08,79;UBERON:0010147,1.35e-08,2;UBERON:0003937,1.35e-08,2;UBERON:0005399,1.35e-08,2;UBERON:0002100,2.20e-08,90;UBERON:0003914,5.29e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,5.439770669662,0.539703191637817,0.649776417447669,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,1.73519228303894,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,2.04365644166873,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,1.47610147979602,0.627994911365499,1.85095745882701,2.37162101669719,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,9.07957269940198,0.549122826376163,10.0637744569148,10.0478055870496,1.87222603868736,0.252578877947112,0.538192240565737,6.75420929908714,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.329940245945071,5.30980553359851,0,0,0,0,0.307435147943927,0,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,1.32317038832977,0,0.161464426695906,0.0603129249281559,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.269728692769641,0.165306911450672,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0.214368379079066,2.00628841614145,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr12:85777422..85777462,- | |||
}} |
Revision as of 23:28, 12 September 2013
Short description: | p@chr12:85777422..85777462, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:85777422..85777462, - |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 7.40e-12 | 25 |
exocrine system | 7.40e-12 | 25 |
liver | 6.57e-11 | 22 |
epithelial sac | 6.57e-11 | 22 |
digestive gland | 6.57e-11 | 22 |
epithelium of foregut-midgut junction | 6.57e-11 | 22 |
anatomical boundary | 6.57e-11 | 22 |
hepatobiliary system | 6.57e-11 | 22 |
foregut-midgut junction | 6.57e-11 | 22 |
hepatic diverticulum | 6.57e-11 | 22 |
liver primordium | 6.57e-11 | 22 |
septum transversum | 6.57e-11 | 22 |
liver bud | 6.57e-11 | 22 |
digestive tract diverticulum | 2.20e-10 | 23 |
sac | 2.20e-10 | 23 |
abdomen element | 9.42e-10 | 49 |
abdominal segment element | 9.42e-10 | 49 |
abdominal segment of trunk | 9.42e-10 | 49 |
abdomen | 9.42e-10 | 49 |
trunk mesenchyme | 5.54e-09 | 45 |
mesenchyme | 8.90e-09 | 61 |
entire embryonic mesenchyme | 8.90e-09 | 61 |
trunk region element | 1.27e-08 | 79 |
male accessory sex gland | 1.35e-08 | 2 |
sex gland | 1.35e-08 | 2 |
male reproductive gland | 1.35e-08 | 2 |
trunk | 2.20e-08 | 90 |
epithelial tube | 5.29e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.