FFCP PHASE1:Hg19::chr3:50645235..50645254,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=196bp_to_CU689193_5end|coexpression_cluster_id=C1928|description=CAGE_peak_1_at_CU689193_5end|id=chr3:50645235..50645254,+|ontology_enrichment_celltype=CL:0002032!1.11e-07!165;CL:0000837!1.11e-07!165;CL:0000988!2.07e-07!182;CL:0000037!6.17e-07!172;CL:0000566!6.17e-07!172|ontology_enrichment_celltype_v019=CL:0002127;1.84e-14;1!CL:0000911;1.84e-14;1!CL:0000814;1.84e-14;1!CL:0000764;7.03e-08;2!CL:0000558;7.03e-08;2|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-14,1;CL:0000914,1.84e-14,1;CL:0000911,1.84e-14,1;CL:0000814,1.84e-14,1;CL:0002042,1.84e-14,1;CL:0002039,1.84e-14,1;CL:0002040,1.84e-14,1;CL:0002041,1.84e-14,1;CL:0000893,7.03e-08,2;CL:0002489,7.03e-08,2;CL:0000809,7.03e-08,2;CL:0000808,7.03e-08,2;CL:0000894,7.03e-08,2;CL:0000806,7.03e-08,2;CL:0000807,7.03e-08,2;CL:0000805,7.03e-08,2;CL:0002425,7.03e-08,2;CL:0000764,9.19e-08,2;CL:0000765,9.19e-08,2;CL:0000050,9.19e-08,2;CL:0000038,9.19e-08,2;CL:0000558,9.19e-08,2;CL:0000547,9.19e-08,2;CL:0000549,9.19e-08,2;CL:0000550,9.19e-08,2;CL:0000552,9.19e-08,2|ontology_enrichment_development_v019=CL:0002425;7.03e-08;2|ontology_enrichment_disease=DOID:1036!1.36e-09!8;DOID:1240!2.57e-07!39|ontology_enrichment_disease_v019=DOID:0060060;7.63e-15;1!DOID:0060061;7.63e-15;1!DOID:8691;7.63e-15;1|ontology_enrichment_disease_v019_2=DOID:0060060,8.17e-15,1;DOID:0060061,8.17e-15,1;DOID:8691,8.17e-15,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.598390972864896,1.70489900213078,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84217042164153,0,0.473447805734733,0,0.891283655081389,0,0,0,4.99556146930133,3.38154303655683,1.47994114143309,2.48715016007264,2.02862160014537,0.14828656316206,0.267540828089713,0,1.58633079776593,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0.370784442784429,0.97364218096405,1.21890816109487,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0.5745161103971,0,0.324621940274555,0.842391534340376,0,0,0,0.50787533340481,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.941881538370149,0,0.225595660617181,0.19606253431774,0.167821586975843,0.948768663620925,0.317873157960757,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.236417121897595,0.419636705079985,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,1.2534494701135,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,2.19986135440423,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p1@CU689193}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=196bp_to_CU689193_5end | |||
|coexpression_cluster_id=C1928 | |||
|description=CAGE_peak_1_at_CU689193_5end | |||
|id=chr3:50645235..50645254,+ | |||
|ontology_enrichment_celltype=CL:0002032!1.11e-07!165;CL:0000837!1.11e-07!165;CL:0000988!2.07e-07!182;CL:0000037!6.17e-07!172;CL:0000566!6.17e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.84e-14;1!CL:0000911;1.84e-14;1!CL:0000814;1.84e-14;1!CL:0000764;7.03e-08;2!CL:0000558;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-14,1;CL:0000914,1.84e-14,1;CL:0000911,1.84e-14,1;CL:0000814,1.84e-14,1;CL:0002042,1.84e-14,1;CL:0002039,1.84e-14,1;CL:0002040,1.84e-14,1;CL:0002041,1.84e-14,1;CL:0000893,7.03e-08,2;CL:0002489,7.03e-08,2;CL:0000809,7.03e-08,2;CL:0000808,7.03e-08,2;CL:0000894,7.03e-08,2;CL:0000806,7.03e-08,2;CL:0000807,7.03e-08,2;CL:0000805,7.03e-08,2;CL:0002425,7.03e-08,2;CL:0000764,9.19e-08,2;CL:0000765,9.19e-08,2;CL:0000050,9.19e-08,2;CL:0000038,9.19e-08,2;CL:0000558,9.19e-08,2;CL:0000547,9.19e-08,2;CL:0000549,9.19e-08,2;CL:0000550,9.19e-08,2;CL:0000552,9.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;7.03e-08;2 | |||
|ontology_enrichment_disease=DOID:1036!1.36e-09!8;DOID:1240!2.57e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.63e-15;1!DOID:0060061;7.63e-15;1!DOID:8691;7.63e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.17e-15,1;DOID:0060061,8.17e-15,1;DOID:8691,8.17e-15,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.598390972864896,1.70489900213078,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84217042164153,0,0.473447805734733,0,0.891283655081389,0,0,0,4.99556146930133,3.38154303655683,1.47994114143309,2.48715016007264,2.02862160014537,0.14828656316206,0.267540828089713,0,1.58633079776593,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0.370784442784429,0.97364218096405,1.21890816109487,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0.5745161103971,0,0.324621940274555,0.842391534340376,0,0,0,0.50787533340481,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.941881538370149,0,0.225595660617181,0.19606253431774,0.167821586975843,0.948768663620925,0.317873157960757,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.236417121897595,0.419636705079985,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,1.2534494701135,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,2.19986135440423,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@CU689193 | |||
}} |
Revision as of 00:42, 13 September 2013
Short description: | p1@CU689193 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CU689193_5end |
Coexpression cluster: | C1928_CD4_adult_NK_Dendritic_acute_mycosis_CD14 |
Association with transcript: | 196bp_to_CU689193_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.84e-14 | 1 |
immature NK T cell | 1.84e-14 | 1 |
effector T cell | 1.84e-14 | 1 |
mature NK T cell | 1.84e-14 | 1 |
immature NK T cell stage IV | 1.84e-14 | 1 |
immature NK T cell stage I | 1.84e-14 | 1 |
immature NK T cell stage II | 1.84e-14 | 1 |
immature NK T cell stage III | 1.84e-14 | 1 |
thymocyte | 7.03e-08 | 2 |
double negative thymocyte | 7.03e-08 | 2 |
double-positive, alpha-beta thymocyte | 7.03e-08 | 2 |
DN4 thymocyte | 7.03e-08 | 2 |
DN1 thymic pro-T cell | 7.03e-08 | 2 |
DN2 thymocyte | 7.03e-08 | 2 |
DN3 thymocyte | 7.03e-08 | 2 |
immature single positive thymocyte | 7.03e-08 | 2 |
early T lineage precursor | 7.03e-08 | 2 |
erythroid lineage cell | 9.19e-08 | 2 |
erythroblast | 9.19e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 9.19e-08 | 2 |
erythroid progenitor cell | 9.19e-08 | 2 |
reticulocyte | 9.19e-08 | 2 |
proerythroblast | 9.19e-08 | 2 |
basophilic erythroblast | 9.19e-08 | 2 |
polychromatophilic erythroblast | 9.19e-08 | 2 |
orthochromatic erythroblast | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.17e-15 | 1 |
cutaneous T cell lymphoma | 8.17e-15 | 1 |
mycosis fungoides | 8.17e-15 | 1 |
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