FFCP PHASE1:Mm9::chr13:74199856..74199858,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:74199856..74199858,+|id=chr13:74199856..74199858,+|ontology_enrichment_celltype=CL:0002250!1.57e-08!3;CL:0002563!5.69e-07!9;CL:0002251!5.69e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,5.61e-30,3;CL:0002563,4.56e-11,9;CL:0002251,4.56e-11,9;CL:0002076,3.18e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!5.69e-07!9;UBERON:0004808!5.69e-07!9;UBERON:0001277!5.69e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.56e-11,9;UBERON:0004808,4.56e-11,9;UBERON:0001277,4.56e-11,9;UBERON:0000485,2.51e-09,11;UBERON:0001242,4.08e-08,13;UBERON:0001262,4.08e-08,13;UBERON:0004786,4.08e-08,13;UBERON:0000344,3.18e-07,15|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.866554859253824,0.166234645358492,2.6542016314108,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:74199856..74199858,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:74199856..74199858,+ | |||
|id=chr13:74199856..74199858,+ | |||
|ontology_enrichment_celltype=CL:0002250!1.57e-08!3;CL:0002563!5.69e-07!9;CL:0002251!5.69e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,5.61e-30,3;CL:0002563,4.56e-11,9;CL:0002251,4.56e-11,9;CL:0002076,3.18e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.69e-07!9;UBERON:0004808!5.69e-07!9;UBERON:0001277!5.69e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.56e-11,9;UBERON:0004808,4.56e-11,9;UBERON:0001277,4.56e-11,9;UBERON:0000485,2.51e-09,11;UBERON:0001242,4.08e-08,13;UBERON:0001262,4.08e-08,13;UBERON:0004786,4.08e-08,13;UBERON:0000344,3.18e-07,15 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.866554859253824,0.166234645358492,2.6542016314108,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:74199856..74199858,+ | |||
}} |
Revision as of 01:06, 13 September 2013
Short description: | p@chr13:74199856..74199858, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:74199856..74199858, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 5.61e-30 | 3 |
intestinal epithelial cell | 4.56e-11 | 9 |
epithelial cell of alimentary canal | 4.56e-11 | 9 |
endo-epithelial cell | 3.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.56e-11 | 9 |
gastrointestinal system epithelium | 4.56e-11 | 9 |
intestinal epithelium | 4.56e-11 | 9 |
simple columnar epithelium | 2.51e-09 | 11 |
intestinal mucosa | 4.08e-08 | 13 |
wall of intestine | 4.08e-08 | 13 |
gastrointestinal system mucosa | 4.08e-08 | 13 |
mucosa | 3.18e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.