FFCP PHASE1:Mm9::chr14:122504223..122504252,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=363|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:122504223..122504252,+|id=chr14:122504223..122504252,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,5.95e-07,9;CL:0002251,5.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.64e-08,8;UBERON:0003296,5.64e-08,8;UBERON:0010133,5.64e-08,8;UBERON:0003350,5.95e-07,9;UBERON:0004808,5.95e-07,9;UBERON:0001277,5.95e-07,9|phase1_expression=0.960893082628764,1.74487703819681,1.36499771816861,3.93203474698879,4.50806156951712,1.51091344720701,0.934450562382103,1.93684985162364,1.83025338797167,2.10658073689794,1.19852577757853,1.27635454392538,2.73921167889929,2.97229368224591,0.666219523631325,0,0,0.946386496074713,1.23402990245165,3.81950686618227,1.53077922271926,0.397163804803541,0,0.47997726838022,0.45881856213434,1.72269589234506,0.430761996159075,0.861884930743556,0.570070258369122,0,0.443461021310609,0.635030673459631,1.84519436275371,0,2.88851619751275,1.49611180822643,2.45003227514843,5.4409111995798,4.6880120671428,6.28228492768558,17.6469446409304,6.83045484958446,2.91306211818692,1.00717454380462,0.912392380975631,0.734187008646726,1.56478268869608,0.872100625521786,0.439372365468944,0.388859798148567,0.699932108126813,0,3.85899993932794,0.725362142011344,0.336093799142464,0.514518872071894,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.127687338085188,0.614426133024974,0.263772575460388,0.365950574409639,0,0.837548997004143,0.56276261003168,0.45839474333043,0,0.427115042397309,0.186399445825301,0,0.151143120213571,3.18850937571846,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,0.448026887097336,1.26399978118577,0.511290967734173,0.519572009205738,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0.506719730950197,0,0.91347103775248,1.03575153458869,0.445326417194474,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0.879666139307728,0.494389935468748,0.722996784599558,1.76922110389975,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0.41889341362691,0.766371165625774,0.11981512450592,0.599902730993408,0.127070227073065,0.898743836428936,0.457500602818626,0.376963056338593,0.347648640384553,0,0,0.486723789203273,0.509196819251581,0.995255764880744,3.53811861807145,0.210441855886474,0.780722657776222,0.689706313300419,1.0803727788321,0.60281927134286,0.748401490664606,0.896796041993948,1.03071897015702,0.776110112217047,0.431135985865684,1.13463648100692,1.40760899331159,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,2.80885274925294,1.28673953557358,0.568326998791185,0.414251545071004,0.703578179943289,1.80062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.56748166682099,0.438599962275997,0.219550115291051,0.402619256281115,0.420579897128254,0.823236899034275,0.660837565967596,0.264450566663544,1.2797295032114,0.696710015581316,0.257734922644187,0.201683524623343,0,0.760902504450237,1.89811624617805,0.494096864172033,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0.948339504765408,0.799739588268102,2.25415471346161,0.610953983535943,1.16371492300575,0.350679099451593,0.379419222745544,0.295220295959204,0.941992367048249,0.740382983530803,1.48226313543574,0,0.589676985339609,0.449724224769707,0.811440485554012,0,1.78238096246994,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0,1.51547326768267,0.896987067609561,2.8946611281802,0.554259570499814,0.568474235311454,0.325929952884052,0.848725428875941,0.469380496577004,1.34005005953453,0.714130922658041,0.390267295715598,0.472905432318573,0.221464689648775,0,0.491589944147214,1.03610989119537,0.867894351489069,1.50791283939272,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.163934945376675,0.252470927204373,0.94652465824877,0,0.646270193198397,0.238968797952552,1.55959071857676,0.849229592366497,1.21443210502468,0.292255857911312,1.97643888973262,0.642642632843614,0.709700426041343,1.06839362200353,0,0.494910368917606,1.32745138339963,0.728341908464944,0.604647113929502,0.943025398779491,0,2.15204603560749,0.516856586336442,0.363533729477506,0.712994756769443,1.8962205476149,2.10837217149998,2.06271086496374,5.44703369206061,1.26042765821917,1.55230420539305,1.07168517515796,2.30542303734956,3.0322698992352,3.62007845324666,3.04464949114599,0.469343416127421,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0,0.370850604021019,0.683483523191411,0.412773735926445,0.370389054739423,1.31857919903284,0.410082683163076,0.457556346413045,0.509935289981566,1.11961161858926,1.24379976423981,0,0.790839983952838,0.406638934253697,0.648032044930808,0.627264888043406,0.655087691238533,0.539457385539283,0.826534557253359,0.523511883968059,0.777689839750757,0,8.45539408026285,0.299033092087958,1.15820943319968,1.36115831840833,1.29159823477731,1.520605129417,0.938857909166032,0.911430693907651,1.36317147753424,4.59009829569411,11.8092302565725,0.316011120628178,1.21635129174099,1.33524244314275,0.51968329191118,0.895133478337407,0.198681354781265,0.120195449519969,0.590758108698309,0.706765149637033,0.15241361331,0.302478555410522,0.487289403698762,0.577271049841977,1.63627663054197,0.226730383615211,1.10992976687032,1.43542170575161,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0.643105137237198,2.00628841614145,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,1.04806581313991,0.735374033800057,1.11123363900808,0,0.64183841918363,0,0.50695859978048,0.188626341386076,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.463537303779422,0.38581844092741,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.423073039458382,0.73171189149109,0.263069711437843,0.407412341537585,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.771626443924566,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.695603506861264|short_description=p@chr14:122504223..122504252,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=363 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:122504223..122504252,+ | |||
|id=chr14:122504223..122504252,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.95e-07,9;CL:0002251,5.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.64e-08,8;UBERON:0003296,5.64e-08,8;UBERON:0010133,5.64e-08,8;UBERON:0003350,5.95e-07,9;UBERON:0004808,5.95e-07,9;UBERON:0001277,5.95e-07,9 | |||
|phase1_expression=0.960893082628764,1.74487703819681,1.36499771816861,3.93203474698879,4.50806156951712,1.51091344720701,0.934450562382103,1.93684985162364,1.83025338797167,2.10658073689794,1.19852577757853,1.27635454392538,2.73921167889929,2.97229368224591,0.666219523631325,0,0,0.946386496074713,1.23402990245165,3.81950686618227,1.53077922271926,0.397163804803541,0,0.47997726838022,0.45881856213434,1.72269589234506,0.430761996159075,0.861884930743556,0.570070258369122,0,0.443461021310609,0.635030673459631,1.84519436275371,0,2.88851619751275,1.49611180822643,2.45003227514843,5.4409111995798,4.6880120671428,6.28228492768558,17.6469446409304,6.83045484958446,2.91306211818692,1.00717454380462,0.912392380975631,0.734187008646726,1.56478268869608,0.872100625521786,0.439372365468944,0.388859798148567,0.699932108126813,0,3.85899993932794,0.725362142011344,0.336093799142464,0.514518872071894,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.127687338085188,0.614426133024974,0.263772575460388,0.365950574409639,0,0.837548997004143,0.56276261003168,0.45839474333043,0,0.427115042397309,0.186399445825301,0,0.151143120213571,3.18850937571846,1.72084775396277,0.679971333707751,1.61910957491345,1.94932925234301,0.448026887097336,1.26399978118577,0.511290967734173,0.519572009205738,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0.506719730950197,0,0.91347103775248,1.03575153458869,0.445326417194474,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0.879666139307728,0.494389935468748,0.722996784599558,1.76922110389975,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0.41889341362691,0.766371165625774,0.11981512450592,0.599902730993408,0.127070227073065,0.898743836428936,0.457500602818626,0.376963056338593,0.347648640384553,0,0,0.486723789203273,0.509196819251581,0.995255764880744,3.53811861807145,0.210441855886474,0.780722657776222,0.689706313300419,1.0803727788321,0.60281927134286,0.748401490664606,0.896796041993948,1.03071897015702,0.776110112217047,0.431135985865684,1.13463648100692,1.40760899331159,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,2.80885274925294,1.28673953557358,0.568326998791185,0.414251545071004,0.703578179943289,1.80062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.56748166682099,0.438599962275997,0.219550115291051,0.402619256281115,0.420579897128254,0.823236899034275,0.660837565967596,0.264450566663544,1.2797295032114,0.696710015581316,0.257734922644187,0.201683524623343,0,0.760902504450237,1.89811624617805,0.494096864172033,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0.948339504765408,0.799739588268102,2.25415471346161,0.610953983535943,1.16371492300575,0.350679099451593,0.379419222745544,0.295220295959204,0.941992367048249,0.740382983530803,1.48226313543574,0,0.589676985339609,0.449724224769707,0.811440485554012,0,1.78238096246994,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0,1.51547326768267,0.896987067609561,2.8946611281802,0.554259570499814,0.568474235311454,0.325929952884052,0.848725428875941,0.469380496577004,1.34005005953453,0.714130922658041,0.390267295715598,0.472905432318573,0.221464689648775,0,0.491589944147214,1.03610989119537,0.867894351489069,1.50791283939272,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.163934945376675,0.252470927204373,0.94652465824877,0,0.646270193198397,0.238968797952552,1.55959071857676,0.849229592366497,1.21443210502468,0.292255857911312,1.97643888973262,0.642642632843614,0.709700426041343,1.06839362200353,0,0.494910368917606,1.32745138339963,0.728341908464944,0.604647113929502,0.943025398779491,0,2.15204603560749,0.516856586336442,0.363533729477506,0.712994756769443,1.8962205476149,2.10837217149998,2.06271086496374,5.44703369206061,1.26042765821917,1.55230420539305,1.07168517515796,2.30542303734956,3.0322698992352,3.62007845324666,3.04464949114599,0.469343416127421,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0,0.370850604021019,0.683483523191411,0.412773735926445,0.370389054739423,1.31857919903284,0.410082683163076,0.457556346413045,0.509935289981566,1.11961161858926,1.24379976423981,0,0.790839983952838,0.406638934253697,0.648032044930808,0.627264888043406,0.655087691238533,0.539457385539283,0.826534557253359,0.523511883968059,0.777689839750757,0,8.45539408026285,0.299033092087958,1.15820943319968,1.36115831840833,1.29159823477731,1.520605129417,0.938857909166032,0.911430693907651,1.36317147753424,4.59009829569411,11.8092302565725,0.316011120628178,1.21635129174099,1.33524244314275,0.51968329191118,0.895133478337407,0.198681354781265,0.120195449519969,0.590758108698309,0.706765149637033,0.15241361331,0.302478555410522,0.487289403698762,0.577271049841977,1.63627663054197,0.226730383615211,1.10992976687032,1.43542170575161,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0.643105137237198,2.00628841614145,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,1.04806581313991,0.735374033800057,1.11123363900808,0,0.64183841918363,0,0.50695859978048,0.188626341386076,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.463537303779422,0.38581844092741,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.423073039458382,0.73171189149109,0.263069711437843,0.407412341537585,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.771626443924566,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr14:122504223..122504252,+ | |||
}} | |||
Revision as of 01:36, 13 September 2013
| Short description: | p@chr14:122504223..122504252, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr14:122504223..122504252, + |
| Coexpression cluster: | MCL_coexpression_mm9:363 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 5.95e-07 | 9 |
| epithelial cell of alimentary canal | 5.95e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| pituitary gland | 5.64e-08 | 8 |
| gland of diencephalon | 5.64e-08 | 8 |
| neuroendocrine gland | 5.64e-08 | 8 |
| epithelium of mucosa | 5.95e-07 | 9 |
| gastrointestinal system epithelium | 5.95e-07 | 9 |
| intestinal epithelium | 5.95e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
