FFCP PHASE1:Mm9::chr14:41928437..41928446,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:41928437..41928446,+|id=chr14:41928437..41928446,+|ontology_enrichment_celltype=CL:0000181!1.81e-09!5;CL:0000417!1.81e-09!5;CL:0000668!1.81e-09!5;CL:0000412!1.81e-09!5;CL:0000182!1.81e-09!5|ontology_enrichment_celltype_v019_2=CL:0000182,3.46e-18,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.57e-30!22;UBERON:0007499!7.57e-30!22;UBERON:0006925!7.57e-30!22;UBERON:0009497!7.57e-30!22;UBERON:0000015!7.57e-30!22;UBERON:0002423!7.57e-30!22;UBERON:0006235!7.57e-30!22;UBERON:0008835!7.57e-30!22;UBERON:0003894!7.57e-30!22;UBERON:0004161!7.57e-30!22;UBERON:0008836!7.57e-30!22;UBERON:0009854!1.79e-28!23;UBERON:0009856!1.79e-28!23;UBERON:0002365!4.71e-26!25;UBERON:0002330!4.71e-26!25;UBERON:0003914!5.40e-13!47;UBERON:0005256!5.40e-13!47;UBERON:0005172!2.19e-12!49;UBERON:0005173!2.19e-12!49;UBERON:0002417!2.19e-12!49;UBERON:0000916!2.19e-12!49;UBERON:0005057!7.95e-12!51;UBERON:0003929!7.93e-11!55;UBERON:0009569!2.68e-10!66;UBERON:0002368!9.16e-10!60;UBERON:0000466!9.20e-10!79;UBERON:0005911!9.27e-10!69;UBERON:0001041!2.22e-09!92;UBERON:0000949!2.49e-09!72;UBERON:0005177!6.51e-09!85;UBERON:0002530!7.27e-09!65;UBERON:0000077!9.00e-09!97;UBERON:0000490!1.06e-08!66;UBERON:0002405!4.30e-08!70;UBERON:0002100!2.00e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.67e-28,22;UBERON:0007499,3.67e-28,22;UBERON:0006925,3.67e-28,22;UBERON:0009497,3.67e-28,22;UBERON:0000015,3.67e-28,22;UBERON:0002423,3.67e-28,22;UBERON:0006235,3.67e-28,22;UBERON:0008835,3.67e-28,22;UBERON:0003894,3.67e-28,22;UBERON:0004161,3.67e-28,22;UBERON:0008836,3.67e-28,22;UBERON:0009854,6.18e-27,23;UBERON:0009856,6.18e-27,23;UBERON:0002365,8.91e-25,25;UBERON:0002330,8.91e-25,25;UBERON:0005256,1.06e-13,45;UBERON:0003914,4.14e-13,47;UBERON:0005172,1.45e-12,49;UBERON:0005173,1.45e-12,49;UBERON:0002417,1.45e-12,49;UBERON:0000916,1.45e-12,49;UBERON:0003929,3.62e-11,55;UBERON:0000949,1.02e-10,72;UBERON:0002368,3.26e-10,60;UBERON:0003104,4.84e-10,61;UBERON:0009142,4.84e-10,61;UBERON:0005177,9.73e-10,79;UBERON:0002530,2.10e-09,65;UBERON:0000490,2.95e-09,66;UBERON:0009569,2.95e-09,66;UBERON:0005911,7.69e-09,69;UBERON:0002100,1.67e-08,90;UBERON:0001041,1.41e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,2.15881276655127,5.84798775702902,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,8.43103179230184,1.64736847912849,11.5014565221884,0.372140947668503,0.312037673114561,1.01031551178845,0,2.41221760681684,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr14:41928437..41928446,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:41928437..41928446,+ | |||
|id=chr14:41928437..41928446,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.81e-09!5;CL:0000417!1.81e-09!5;CL:0000668!1.81e-09!5;CL:0000412!1.81e-09!5;CL:0000182!1.81e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.46e-18,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.57e-30!22;UBERON:0007499!7.57e-30!22;UBERON:0006925!7.57e-30!22;UBERON:0009497!7.57e-30!22;UBERON:0000015!7.57e-30!22;UBERON:0002423!7.57e-30!22;UBERON:0006235!7.57e-30!22;UBERON:0008835!7.57e-30!22;UBERON:0003894!7.57e-30!22;UBERON:0004161!7.57e-30!22;UBERON:0008836!7.57e-30!22;UBERON:0009854!1.79e-28!23;UBERON:0009856!1.79e-28!23;UBERON:0002365!4.71e-26!25;UBERON:0002330!4.71e-26!25;UBERON:0003914!5.40e-13!47;UBERON:0005256!5.40e-13!47;UBERON:0005172!2.19e-12!49;UBERON:0005173!2.19e-12!49;UBERON:0002417!2.19e-12!49;UBERON:0000916!2.19e-12!49;UBERON:0005057!7.95e-12!51;UBERON:0003929!7.93e-11!55;UBERON:0009569!2.68e-10!66;UBERON:0002368!9.16e-10!60;UBERON:0000466!9.20e-10!79;UBERON:0005911!9.27e-10!69;UBERON:0001041!2.22e-09!92;UBERON:0000949!2.49e-09!72;UBERON:0005177!6.51e-09!85;UBERON:0002530!7.27e-09!65;UBERON:0000077!9.00e-09!97;UBERON:0000490!1.06e-08!66;UBERON:0002405!4.30e-08!70;UBERON:0002100!2.00e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.67e-28,22;UBERON:0007499,3.67e-28,22;UBERON:0006925,3.67e-28,22;UBERON:0009497,3.67e-28,22;UBERON:0000015,3.67e-28,22;UBERON:0002423,3.67e-28,22;UBERON:0006235,3.67e-28,22;UBERON:0008835,3.67e-28,22;UBERON:0003894,3.67e-28,22;UBERON:0004161,3.67e-28,22;UBERON:0008836,3.67e-28,22;UBERON:0009854,6.18e-27,23;UBERON:0009856,6.18e-27,23;UBERON:0002365,8.91e-25,25;UBERON:0002330,8.91e-25,25;UBERON:0005256,1.06e-13,45;UBERON:0003914,4.14e-13,47;UBERON:0005172,1.45e-12,49;UBERON:0005173,1.45e-12,49;UBERON:0002417,1.45e-12,49;UBERON:0000916,1.45e-12,49;UBERON:0003929,3.62e-11,55;UBERON:0000949,1.02e-10,72;UBERON:0002368,3.26e-10,60;UBERON:0003104,4.84e-10,61;UBERON:0009142,4.84e-10,61;UBERON:0005177,9.73e-10,79;UBERON:0002530,2.10e-09,65;UBERON:0000490,2.95e-09,66;UBERON:0009569,2.95e-09,66;UBERON:0005911,7.69e-09,69;UBERON:0002100,1.67e-08,90;UBERON:0001041,1.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,2.15881276655127,5.84798775702902,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,8.43103179230184,1.64736847912849,11.5014565221884,0.372140947668503,0.312037673114561,1.01031551178845,0,2.41221760681684,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr14:41928437..41928446,+ | |||
}} |
Revision as of 02:08, 13 September 2013
Short description: | p@chr14:41928437..41928446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:41928437..41928446, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.46e-18 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.67e-28 | 22 |
epithelial sac | 3.67e-28 | 22 |
digestive gland | 3.67e-28 | 22 |
epithelium of foregut-midgut junction | 3.67e-28 | 22 |
anatomical boundary | 3.67e-28 | 22 |
hepatobiliary system | 3.67e-28 | 22 |
foregut-midgut junction | 3.67e-28 | 22 |
hepatic diverticulum | 3.67e-28 | 22 |
liver primordium | 3.67e-28 | 22 |
septum transversum | 3.67e-28 | 22 |
liver bud | 3.67e-28 | 22 |
digestive tract diverticulum | 6.18e-27 | 23 |
sac | 6.18e-27 | 23 |
exocrine gland | 8.91e-25 | 25 |
exocrine system | 8.91e-25 | 25 |
trunk mesenchyme | 1.06e-13 | 45 |
epithelial tube | 4.14e-13 | 47 |
abdomen element | 1.45e-12 | 49 |
abdominal segment element | 1.45e-12 | 49 |
abdominal segment of trunk | 1.45e-12 | 49 |
abdomen | 1.45e-12 | 49 |
gut epithelium | 3.62e-11 | 55 |
endocrine system | 1.02e-10 | 72 |
endocrine gland | 3.26e-10 | 60 |
mesenchyme | 4.84e-10 | 61 |
entire embryonic mesenchyme | 4.84e-10 | 61 |
trunk region element | 9.73e-10 | 79 |
gland | 2.10e-09 | 65 |
unilaminar epithelium | 2.95e-09 | 66 |
subdivision of trunk | 2.95e-09 | 66 |
endo-epithelium | 7.69e-09 | 69 |
trunk | 1.67e-08 | 90 |
foregut | 1.41e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.