FFCP PHASE1:Mm9::chr14:69862321..69862339,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=127|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:69862321..69862339,-|id=chr14:69862321..69862339,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,2.87e-10,3;CL:0002006,2.87e-10,3;CL:0002024,2.87e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.02e-14,6;UBERON:0004457,6.02e-14,6;UBERON:0000042,6.02e-14,6;UBERON:0004854,6.02e-14,6;UBERON:0009034,6.02e-14,6;UBERON:0002095,6.02e-14,6;UBERON:0004782,6.02e-14,6;UBERON:0003281,6.02e-14,6;UBERON:0009664,6.02e-14,6;UBERON:0002296,6.02e-14,6;UBERON:0005602,6.02e-14,6;UBERON:0001179,6.02e-14,6;UBERON:0006293,6.02e-14,6;UBERON:0005172,5.25e-12,49;UBERON:0005173,5.25e-12,49;UBERON:0002417,5.25e-12,49;UBERON:0000916,5.25e-12,49;UBERON:0002365,3.05e-11,25;UBERON:0002330,3.05e-11,25;UBERON:0002107,1.28e-10,22;UBERON:0007499,1.28e-10,22;UBERON:0006925,1.28e-10,22;UBERON:0009497,1.28e-10,22;UBERON:0000015,1.28e-10,22;UBERON:0002423,1.28e-10,22;UBERON:0006235,1.28e-10,22;UBERON:0008835,1.28e-10,22;UBERON:0003894,1.28e-10,22;UBERON:0004161,1.28e-10,22;UBERON:0008836,1.28e-10,22;UBERON:0009854,4.36e-10,23;UBERON:0009856,4.36e-10,23;UBERON:0003887,3.12e-08,10;UBERON:0009569,4.15e-08,66;UBERON:0001041,3.62e-07,80|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0.171200729931206,0.0874204024189974,1.33243904726265,3.03712901084739,4.89693314689703,0.157731082679119,0.137114433605739,0.42438965179803,0,0.496454756004426,0.522399578277871,0.159992422793407,0,0,0.430761996159075,0,0.570070258369122,0,0,0,0,0,0,0.332469290716985,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.441683036920787,1.93950101254089,0,0,0,0.510914110417183,0.359445373517761,0,0.127070227073065,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0.180062129805349,0.60281927134286,0,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0.925602677324269,0.465067889500816,0,0,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0.671032093801859,0,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,3.17005700860579,0.982794975566015,5.39669069723649,3.65148218499305,3.61765739628625,5.34714288740982,1.15078454980324,1.94562272130042,2.19649130550465,11.5014565221884,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.491589944147214,0.690739927463582,0.433947175744535,0,0.54390568381871,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0.596861720015682,0.328281799490123,0,0.18542530201051,4.27177201994632,0.82554747185289,1.66675074632741,7.72310673719233,4.23752105935178,5.49067615695654,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,1.24267862617385,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0.389762468933385,0.179026695667481,0,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,1.70174701947806,0.419226325255965,0.183843508450014,1.11123363900808,0.206035057238894,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.842773567228942,0.640251524048693,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,1.06485483695602,1.1921809497366,0.726732083161643,0.188218760830661,0.25384382367503,1.46342378298218,1.05227884575137,0.407412341537585,0.561142271657738,0.711810108745045,0.88654034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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=127 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:69862321..69862339,- | |||
|id=chr14:69862321..69862339,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.87e-10,3;CL:0002006,2.87e-10,3;CL:0002024,2.87e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.02e-14,6;UBERON:0004457,6.02e-14,6;UBERON:0000042,6.02e-14,6;UBERON:0004854,6.02e-14,6;UBERON:0009034,6.02e-14,6;UBERON:0002095,6.02e-14,6;UBERON:0004782,6.02e-14,6;UBERON:0003281,6.02e-14,6;UBERON:0009664,6.02e-14,6;UBERON:0002296,6.02e-14,6;UBERON:0005602,6.02e-14,6;UBERON:0001179,6.02e-14,6;UBERON:0006293,6.02e-14,6;UBERON:0005172,5.25e-12,49;UBERON:0005173,5.25e-12,49;UBERON:0002417,5.25e-12,49;UBERON:0000916,5.25e-12,49;UBERON:0002365,3.05e-11,25;UBERON:0002330,3.05e-11,25;UBERON:0002107,1.28e-10,22;UBERON:0007499,1.28e-10,22;UBERON:0006925,1.28e-10,22;UBERON:0009497,1.28e-10,22;UBERON:0000015,1.28e-10,22;UBERON:0002423,1.28e-10,22;UBERON:0006235,1.28e-10,22;UBERON:0008835,1.28e-10,22;UBERON:0003894,1.28e-10,22;UBERON:0004161,1.28e-10,22;UBERON:0008836,1.28e-10,22;UBERON:0009854,4.36e-10,23;UBERON:0009856,4.36e-10,23;UBERON:0003887,3.12e-08,10;UBERON:0009569,4.15e-08,66;UBERON:0001041,3.62e-07,80 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0.171200729931206,0.0874204024189974,1.33243904726265,3.03712901084739,4.89693314689703,0.157731082679119,0.137114433605739,0.42438965179803,0,0.496454756004426,0.522399578277871,0.159992422793407,0,0,0.430761996159075,0,0.570070258369122,0,0,0,0,0,0,0.332469290716985,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.441683036920787,1.93950101254089,0,0,0,0.510914110417183,0.359445373517761,0,0.127070227073065,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0.180062129805349,0.60281927134286,0,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0.925602677324269,0.465067889500816,0,0,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0.671032093801859,0,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,3.17005700860579,0.982794975566015,5.39669069723649,3.65148218499305,3.61765739628625,5.34714288740982,1.15078454980324,1.94562272130042,2.19649130550465,11.5014565221884,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.491589944147214,0.690739927463582,0.433947175744535,0,0.54390568381871,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0.596861720015682,0.328281799490123,0,0.18542530201051,4.27177201994632,0.82554747185289,1.66675074632741,7.72310673719233,4.23752105935178,5.49067615695654,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,1.24267862617385,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0.389762468933385,0.179026695667481,0,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.38983152295901,0.192423683280659,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,1.70174701947806,0.419226325255965,0.183843508450014,1.11123363900808,0.206035057238894,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.842773567228942,0.640251524048693,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,1.06485483695602,1.1921809497366,0.726732083161643,0.188218760830661,0.25384382367503,1.46342378298218,1.05227884575137,0.407412341537585,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.619747364743864,0.578719832943424,0.249810577937946,1.16965804222704,0,0,0,0.231867835620421 | |||
|short_description=p@chr14:69862321..69862339,- | |||
}} |
Revision as of 02:55, 13 September 2013
Short description: | p@chr14:69862321..69862339, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:69862321..69862339, - |
Coexpression cluster: | MCL_coexpression_mm9:127 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.87e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.87e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.87e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.02e-14 | 6 |
cavity lining | 6.02e-14 | 6 |
serous membrane | 6.02e-14 | 6 |
gastrointestinal system mesentery | 6.02e-14 | 6 |
stomach region | 6.02e-14 | 6 |
mesentery | 6.02e-14 | 6 |
gastrointestinal system serosa | 6.02e-14 | 6 |
mesentery of stomach | 6.02e-14 | 6 |
gut mesentery | 6.02e-14 | 6 |
dorsal mesentery | 6.02e-14 | 6 |
dorsal mesogastrium | 6.02e-14 | 6 |
peritoneal cavity | 6.02e-14 | 6 |
spleen primordium | 6.02e-14 | 6 |
abdomen element | 5.25e-12 | 49 |
abdominal segment element | 5.25e-12 | 49 |
abdominal segment of trunk | 5.25e-12 | 49 |
abdomen | 5.25e-12 | 49 |
exocrine gland | 3.05e-11 | 25 |
exocrine system | 3.05e-11 | 25 |
liver | 1.28e-10 | 22 |
epithelial sac | 1.28e-10 | 22 |
digestive gland | 1.28e-10 | 22 |
epithelium of foregut-midgut junction | 1.28e-10 | 22 |
anatomical boundary | 1.28e-10 | 22 |
hepatobiliary system | 1.28e-10 | 22 |
foregut-midgut junction | 1.28e-10 | 22 |
hepatic diverticulum | 1.28e-10 | 22 |
liver primordium | 1.28e-10 | 22 |
septum transversum | 1.28e-10 | 22 |
liver bud | 1.28e-10 | 22 |
digestive tract diverticulum | 4.36e-10 | 23 |
sac | 4.36e-10 | 23 |
intraembryonic coelom | 3.12e-08 | 10 |
subdivision of trunk | 4.15e-08 | 66 |
foregut | 3.62e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.