FFCP PHASE1:Mm9::chr15:38448263..38448268,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=386|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:38448263..38448268,+|id=chr15:38448263..38448268,+|ontology_enrichment_celltype=CL:0002563!7.60e-09!9;CL:0002251!7.60e-09!9;CL:0000066!7.30e-08!25;CL:0000075!2.37e-07!7|ontology_enrichment_celltype_v019_2=CL:0000066,1.39e-32,25;CL:0002563,2.74e-27,9;CL:0002251,2.74e-27,9;CL:0000075,5.52e-27,7;CL:0000239,8.82e-24,6;CL:0000677,8.82e-24,6;CL:0000584,8.82e-24,6;CL:0000223,2.57e-22,20;CL:0002076,6.15e-20,15;CL:0000682,6.65e-12,3;CL:0002321,3.70e-07,70;CL:0000355,3.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.42e-13,3;DOID:4045,9.42e-13,3|ontology_enrichment_uberon=UBERON:0003350!7.60e-09!9;UBERON:0004808!7.60e-09!9;UBERON:0001277!7.60e-09!9;UBERON:0000485!2.55e-08!11;UBERON:0001242!2.36e-07!13;UBERON:0000060!2.36e-07!13;UBERON:0001262!2.36e-07!13;UBERON:0004786!2.36e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.23e-27,11;UBERON:0003350,2.74e-27,9;UBERON:0004808,2.74e-27,9;UBERON:0001277,2.74e-27,9;UBERON:0001242,1.45e-18,13;UBERON:0001262,1.45e-18,13;UBERON:0004786,1.45e-18,13;UBERON:0000344,6.04e-16,15;UBERON:0000490,2.98e-14,66;UBERON:0004923,1.51e-09,24;UBERON:0007524,1.40e-08,11;UBERON:0003077,1.40e-08,11;UBERON:0007285,1.40e-08,11;UBERON:0003929,2.58e-08,55;UBERON:0000160,3.89e-07,31;UBERON:0001134,3.94e-07,9;UBERON:0002036,3.94e-07,9;UBERON:0002385,3.94e-07,9;UBERON:0000486,3.94e-07,9;UBERON:0007503,3.94e-07,9;UBERON:0001015,3.94e-07,9;UBERON:0002329,3.94e-07,9;UBERON:0003082,3.94e-07,9;UBERON:0003059,3.94e-07,9;UBERON:0007282,3.94e-07,9;UBERON:0004290,3.94e-07,9;UBERON:0009618,3.94e-07,9|phase1_expression=0,2.79180326111489,2.72999543633722,4.23449895829562,6.01074875935617,1.34303417529512,2.56973904655078,0.774739940649458,1.54867594366833,0.936258105287974,0.171217968225505,0,0,0.437102012094987,0,0,0,0,0,0,0.17008658030214,0,0,0,0,2.29692785646008,1.29228598847722,1.50829862880122,0.190023419456374,0,0,0,0,0,1.44425809875637,0.664938581433969,2.6542016314108,2.92972141515835,3.1253413780952,2.09409497589519,9.99993529652724,0,0.485510353031154,0.251793635951155,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0.167782606057736,1.45072428402269,0.336093799142464,0,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.37863096666592,0.453429360640713,9.85539261585705,0.860423876981386,0,3.2382191498269,0.649776417447669,0,0.140444420131752,0,0,0,1.12674735821344,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,0,0,0,0.239630249011841,1.79970819298022,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.700592054203017,0.658239399653922,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.849892149969277,0.69975726161829,0.690999869022119,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.463735671240843|short_description=p@chr15:38448263..38448268,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:38448263..38448268,+ | |||
|id=chr15:38448263..38448268,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.60e-09!9;CL:0002251!7.60e-09!9;CL:0000066!7.30e-08!25;CL:0000075!2.37e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.39e-32,25;CL:0002563,2.74e-27,9;CL:0002251,2.74e-27,9;CL:0000075,5.52e-27,7;CL:0000239,8.82e-24,6;CL:0000677,8.82e-24,6;CL:0000584,8.82e-24,6;CL:0000223,2.57e-22,20;CL:0002076,6.15e-20,15;CL:0000682,6.65e-12,3;CL:0002321,3.70e-07,70;CL:0000355,3.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.42e-13,3;DOID:4045,9.42e-13,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!7.60e-09!9;UBERON:0004808!7.60e-09!9;UBERON:0001277!7.60e-09!9;UBERON:0000485!2.55e-08!11;UBERON:0001242!2.36e-07!13;UBERON:0000060!2.36e-07!13;UBERON:0001262!2.36e-07!13;UBERON:0004786!2.36e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.23e-27,11;UBERON:0003350,2.74e-27,9;UBERON:0004808,2.74e-27,9;UBERON:0001277,2.74e-27,9;UBERON:0001242,1.45e-18,13;UBERON:0001262,1.45e-18,13;UBERON:0004786,1.45e-18,13;UBERON:0000344,6.04e-16,15;UBERON:0000490,2.98e-14,66;UBERON:0004923,1.51e-09,24;UBERON:0007524,1.40e-08,11;UBERON:0003077,1.40e-08,11;UBERON:0007285,1.40e-08,11;UBERON:0003929,2.58e-08,55;UBERON:0000160,3.89e-07,31;UBERON:0001134,3.94e-07,9;UBERON:0002036,3.94e-07,9;UBERON:0002385,3.94e-07,9;UBERON:0000486,3.94e-07,9;UBERON:0007503,3.94e-07,9;UBERON:0001015,3.94e-07,9;UBERON:0002329,3.94e-07,9;UBERON:0003082,3.94e-07,9;UBERON:0003059,3.94e-07,9;UBERON:0007282,3.94e-07,9;UBERON:0004290,3.94e-07,9;UBERON:0009618,3.94e-07,9 | |||
|phase1_expression=0,2.79180326111489,2.72999543633722,4.23449895829562,6.01074875935617,1.34303417529512,2.56973904655078,0.774739940649458,1.54867594366833,0.936258105287974,0.171217968225505,0,0,0.437102012094987,0,0,0,0,0,0,0.17008658030214,0,0,0,0,2.29692785646008,1.29228598847722,1.50829862880122,0.190023419456374,0,0,0,0,0,1.44425809875637,0.664938581433969,2.6542016314108,2.92972141515835,3.1253413780952,2.09409497589519,9.99993529652724,0,0.485510353031154,0.251793635951155,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0.167782606057736,1.45072428402269,0.336093799142464,0,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.37863096666592,0.453429360640713,9.85539261585705,0.860423876981386,0,3.2382191498269,0.649776417447669,0,0.140444420131752,0,0,0,1.12674735821344,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,0,0,0,0.239630249011841,1.79970819298022,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.700592054203017,0.658239399653922,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.849892149969277,0.69975726161829,0.690999869022119,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr15:38448263..38448268,+ | |||
}} |
Revision as of 10:27, 13 September 2013
Short description: | p@chr15:38448263..38448268, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:38448263..38448268, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.39e-32 | 25 |
intestinal epithelial cell | 2.74e-27 | 9 |
epithelial cell of alimentary canal | 2.74e-27 | 9 |
columnar/cuboidal epithelial cell | 5.52e-27 | 7 |
brush border epithelial cell | 8.82e-24 | 6 |
gut absorptive cell | 8.82e-24 | 6 |
enterocyte | 8.82e-24 | 6 |
endodermal cell | 2.57e-22 | 20 |
endo-epithelial cell | 6.15e-20 | 15 |
M cell of gut | 6.65e-12 | 3 |
embryonic cell | 3.70e-07 | 70 |
multi-potent skeletal muscle stem cell | 3.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.23e-27 | 11 |
epithelium of mucosa | 2.74e-27 | 9 |
gastrointestinal system epithelium | 2.74e-27 | 9 |
intestinal epithelium | 2.74e-27 | 9 |
intestinal mucosa | 1.45e-18 | 13 |
wall of intestine | 1.45e-18 | 13 |
gastrointestinal system mucosa | 1.45e-18 | 13 |
mucosa | 6.04e-16 | 15 |
unilaminar epithelium | 2.98e-14 | 66 |
organ component layer | 1.51e-09 | 24 |
dense mesenchyme tissue | 1.40e-08 | 11 |
paraxial mesoderm | 1.40e-08 | 11 |
presumptive paraxial mesoderm | 1.40e-08 | 11 |
gut epithelium | 2.58e-08 | 55 |
intestine | 3.89e-07 | 31 |
skeletal muscle tissue | 3.94e-07 | 9 |
striated muscle tissue | 3.94e-07 | 9 |
muscle tissue | 3.94e-07 | 9 |
multilaminar epithelium | 3.94e-07 | 9 |
epithelial vesicle | 3.94e-07 | 9 |
musculature | 3.94e-07 | 9 |
somite | 3.94e-07 | 9 |
myotome | 3.94e-07 | 9 |
presomitic mesoderm | 3.94e-07 | 9 |
presumptive segmental plate | 3.94e-07 | 9 |
dermomyotome | 3.94e-07 | 9 |
trunk paraxial mesoderm | 3.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.42e-13 | 3 |
muscle cancer | 9.42e-13 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.