FFCP PHASE1:Hg19::chr4:74283308..74283317,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=N|UniProt=|association_with_transcript=-405bp_to_ENST00000486939_5end|coexpression_cluster_id=C5|description=CAGE_peak_38_at_ALB_5end|id=chr4:74283308..74283317,+|ontology_enrichment_celltype=CL:0000181!2.24e-42!12;CL:0000417!2.24e-42!12;CL:0000668!2.24e-42!12;CL:0000414!2.24e-42!12;CL:0000412!2.24e-42!12;CL:0000182!2.24e-42!12;CL:0000223!1.14e-14!59|ontology_enrichment_celltype_v019=CL:0000182;1.14e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-45,12;CL:0000223,1.15e-09,58|ontology_enrichment_development_v019=UBERON:0004161;3.34e-32;11!UBERON:0009497;2.42e-27;13!UBERON:0001041;3.98e-12;30!UBERON:0003104;1.22e-11;31!CL:0000223;9.54e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.56e-47!19;UBERON:0006925!2.56e-47!19;UBERON:0008836!2.56e-47!19;UBERON:0008835!8.38e-41!22;UBERON:0003894!8.38e-41!22;UBERON:0009854!5.23e-39!23;UBERON:0007499!7.55e-36!25;UBERON:0009497!7.55e-36!25;UBERON:0000015!7.55e-36!25;UBERON:0002423!7.55e-36!25;UBERON:0006235!7.55e-36!25;UBERON:0004161!7.55e-36!25;UBERON:0005057!1.89e-34!26;UBERON:0009856!1.89e-34!26;UBERON:0002365!8.27e-29!31;UBERON:0002330!8.27e-29!31;UBERON:0002368!1.88e-25!35;UBERON:0003929!2.81e-25!54;UBERON:0000949!8.65e-25!45;UBERON:0002530!1.06e-18!59;UBERON:0005911!2.53e-16!82;UBERON:0005172!5.68e-16!55;UBERON:0005173!5.68e-16!55;UBERON:0002417!2.46e-14!61;UBERON:0000916!2.46e-14!61;UBERON:0004921!4.56e-12!129;UBERON:0004185!4.56e-12!129;UBERON:0001041!6.32e-11!98;UBERON:0005177!6.28e-10!107;UBERON:0000077!6.50e-10!130;UBERON:0001007!7.46e-10!155;UBERON:0001555!7.46e-10!155;UBERON:0007026!7.46e-10!155;UBERON:0000490!2.86e-09!138;UBERON:0004119!6.12e-09!169;UBERON:0000925!6.12e-09!169;UBERON:0006595!6.12e-09!169;UBERON:0000466!2.74e-08!126;UBERON:0009569!2.14e-07!113;UBERON:0002405!3.49e-07!115;UBERON:0005256!3.53e-07!143;UBERON:0003914!4.76e-07!118|ontology_enrichment_uberon_v019=UBERON:0002107;2.63e-56;19!UBERON:0006925;2.63e-56;19!UBERON:0002423;7.69e-43;25!UBERON:0002365;8.63e-35;31!UBERON:0002330;8.63e-35;31!UBERON:0002368;1.48e-28;33!UBERON:0000949;3.22e-22;43!UBERON:0005172;3.46e-14;52!UBERON:0005173;3.46e-14;52!UBERON:0002530;5.70e-12;57!UBERON:0002417;8.04e-12;58!UBERON:0000916;8.04e-12;58!UBERON:0001007;3.34e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.53e-56,19;UBERON:0006925,2.53e-56,19;UBERON:0008836,2.53e-56,19;UBERON:0008835,1.13e-48,22;UBERON:0003894,1.13e-48,22;UBERON:0009854,1.45e-46,23;UBERON:0007499,7.46e-43,25;UBERON:0009497,7.46e-43,25;UBERON:0000015,7.46e-43,25;UBERON:0002423,7.46e-43,25;UBERON:0006235,7.46e-43,25;UBERON:0004161,7.46e-43,25;UBERON:0009856,3.27e-41,26;UBERON:0002365,1.38e-34,31;UBERON:0002330,1.38e-34,31;UBERON:0002368,1.20e-30,35;UBERON:0000949,7.52e-24,45;UBERON:0003929,7.07e-20,54;UBERON:0005172,7.07e-20,54;UBERON:0005173,7.07e-20,54;UBERON:0002530,3.43e-18,59;UBERON:0002417,6.90e-18,60;UBERON:0000916,6.90e-18,60;UBERON:0005911,4.55e-13,82;UBERON:0001041,2.61e-12,87;UBERON:0005177,1.39e-10,101;UBERON:0009569,1.58e-09,112;UBERON:0003914,4.12e-09,117;UBERON:0004921,5.91e-09,118;UBERON:0005256,9.93e-09,122;UBERON:0001007,2.96e-07,145;UBERON:0001555,2.96e-07,145;UBERON:0007026,2.96e-07,145;UBERON:0000490,3.74e-07,148|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0265104465493,4.91413608338813,11.2250082269467,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6544468284517,0.906574442192831,1.14586024552114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7759099657397,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-405bp_to_ENST00000486939_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_38_at_ALB_5end | |||
|id=chr4:74283308..74283317,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.24e-42!12;CL:0000417!2.24e-42!12;CL:0000668!2.24e-42!12;CL:0000414!2.24e-42!12;CL:0000412!2.24e-42!12;CL:0000182!2.24e-42!12;CL:0000223!1.14e-14!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.14e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-45,12;CL:0000223,1.15e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.34e-32;11!UBERON:0009497;2.42e-27;13!UBERON:0001041;3.98e-12;30!UBERON:0003104;1.22e-11;31!CL:0000223;9.54e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.56e-47!19;UBERON:0006925!2.56e-47!19;UBERON:0008836!2.56e-47!19;UBERON:0008835!8.38e-41!22;UBERON:0003894!8.38e-41!22;UBERON:0009854!5.23e-39!23;UBERON:0007499!7.55e-36!25;UBERON:0009497!7.55e-36!25;UBERON:0000015!7.55e-36!25;UBERON:0002423!7.55e-36!25;UBERON:0006235!7.55e-36!25;UBERON:0004161!7.55e-36!25;UBERON:0005057!1.89e-34!26;UBERON:0009856!1.89e-34!26;UBERON:0002365!8.27e-29!31;UBERON:0002330!8.27e-29!31;UBERON:0002368!1.88e-25!35;UBERON:0003929!2.81e-25!54;UBERON:0000949!8.65e-25!45;UBERON:0002530!1.06e-18!59;UBERON:0005911!2.53e-16!82;UBERON:0005172!5.68e-16!55;UBERON:0005173!5.68e-16!55;UBERON:0002417!2.46e-14!61;UBERON:0000916!2.46e-14!61;UBERON:0004921!4.56e-12!129;UBERON:0004185!4.56e-12!129;UBERON:0001041!6.32e-11!98;UBERON:0005177!6.28e-10!107;UBERON:0000077!6.50e-10!130;UBERON:0001007!7.46e-10!155;UBERON:0001555!7.46e-10!155;UBERON:0007026!7.46e-10!155;UBERON:0000490!2.86e-09!138;UBERON:0004119!6.12e-09!169;UBERON:0000925!6.12e-09!169;UBERON:0006595!6.12e-09!169;UBERON:0000466!2.74e-08!126;UBERON:0009569!2.14e-07!113;UBERON:0002405!3.49e-07!115;UBERON:0005256!3.53e-07!143;UBERON:0003914!4.76e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.63e-56;19!UBERON:0006925;2.63e-56;19!UBERON:0002423;7.69e-43;25!UBERON:0002365;8.63e-35;31!UBERON:0002330;8.63e-35;31!UBERON:0002368;1.48e-28;33!UBERON:0000949;3.22e-22;43!UBERON:0005172;3.46e-14;52!UBERON:0005173;3.46e-14;52!UBERON:0002530;5.70e-12;57!UBERON:0002417;8.04e-12;58!UBERON:0000916;8.04e-12;58!UBERON:0001007;3.34e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.53e-56,19;UBERON:0006925,2.53e-56,19;UBERON:0008836,2.53e-56,19;UBERON:0008835,1.13e-48,22;UBERON:0003894,1.13e-48,22;UBERON:0009854,1.45e-46,23;UBERON:0007499,7.46e-43,25;UBERON:0009497,7.46e-43,25;UBERON:0000015,7.46e-43,25;UBERON:0002423,7.46e-43,25;UBERON:0006235,7.46e-43,25;UBERON:0004161,7.46e-43,25;UBERON:0009856,3.27e-41,26;UBERON:0002365,1.38e-34,31;UBERON:0002330,1.38e-34,31;UBERON:0002368,1.20e-30,35;UBERON:0000949,7.52e-24,45;UBERON:0003929,7.07e-20,54;UBERON:0005172,7.07e-20,54;UBERON:0005173,7.07e-20,54;UBERON:0002530,3.43e-18,59;UBERON:0002417,6.90e-18,60;UBERON:0000916,6.90e-18,60;UBERON:0005911,4.55e-13,82;UBERON:0001041,2.61e-12,87;UBERON:0005177,1.39e-10,101;UBERON:0009569,1.58e-09,112;UBERON:0003914,4.12e-09,117;UBERON:0004921,5.91e-09,118;UBERON:0005256,9.93e-09,122;UBERON:0001007,2.96e-07,145;UBERON:0001555,2.96e-07,145;UBERON:0007026,2.96e-07,145;UBERON:0000490,3.74e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0265104465493,4.91413608338813,11.2250082269467,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6544468284517,0.906574442192831,1.14586024552114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7759099657397,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p38@ALB | |||
}} |
Revision as of 11:35, 13 September 2013
Short description: | p38@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -405bp_to_ENST00000486939_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.08e-45 | 12 |
endodermal cell | 1.15e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.53e-56 | 19 |
digestive gland | 2.53e-56 | 19 |
liver bud | 2.53e-56 | 19 |
hepatic diverticulum | 1.13e-48 | 22 |
liver primordium | 1.13e-48 | 22 |
digestive tract diverticulum | 1.45e-46 | 23 |
epithelial sac | 7.46e-43 | 25 |
epithelium of foregut-midgut junction | 7.46e-43 | 25 |
anatomical boundary | 7.46e-43 | 25 |
hepatobiliary system | 7.46e-43 | 25 |
foregut-midgut junction | 7.46e-43 | 25 |
septum transversum | 7.46e-43 | 25 |
sac | 3.27e-41 | 26 |
exocrine gland | 1.38e-34 | 31 |
exocrine system | 1.38e-34 | 31 |
endocrine gland | 1.20e-30 | 35 |
endocrine system | 7.52e-24 | 45 |
gut epithelium | 7.07e-20 | 54 |
abdomen element | 7.07e-20 | 54 |
abdominal segment element | 7.07e-20 | 54 |
gland | 3.43e-18 | 59 |
abdominal segment of trunk | 6.90e-18 | 60 |
abdomen | 6.90e-18 | 60 |
endo-epithelium | 4.55e-13 | 82 |
foregut | 2.61e-12 | 87 |
trunk region element | 1.39e-10 | 101 |
subdivision of trunk | 1.58e-09 | 112 |
epithelial tube | 4.12e-09 | 117 |
subdivision of digestive tract | 5.91e-09 | 118 |
trunk mesenchyme | 9.93e-09 | 122 |
digestive system | 2.96e-07 | 145 |
digestive tract | 2.96e-07 | 145 |
primitive gut | 2.96e-07 | 145 |
unilaminar epithelium | 3.74e-07 | 148 |
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