FFCP PHASE1:Mm9::chr15:99540899..99540911,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=275|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:99540899..99540911,+|id=chr15:99540899..99540911,+|ontology_enrichment_celltype=CL:0000181!9.89e-08!5;CL:0000417!9.89e-08!5;CL:0000668!9.89e-08!5;CL:0000412!9.89e-08!5;CL:0000182!9.89e-08!5|ontology_enrichment_celltype_v019_2=CL:0000182,3.52e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.76e-22!23;UBERON:0009856!1.76e-22!23;UBERON:0002107!1.25e-20!22;UBERON:0007499!1.25e-20!22;UBERON:0006925!1.25e-20!22;UBERON:0009497!1.25e-20!22;UBERON:0000015!1.25e-20!22;UBERON:0002423!1.25e-20!22;UBERON:0006235!1.25e-20!22;UBERON:0008835!1.25e-20!22;UBERON:0003894!1.25e-20!22;UBERON:0004161!1.25e-20!22;UBERON:0008836!1.25e-20!22;UBERON:0002365!1.11e-17!25;UBERON:0002330!1.11e-17!25;UBERON:0005172!2.21e-17!49;UBERON:0005173!2.21e-17!49;UBERON:0002417!2.21e-17!49;UBERON:0000916!2.21e-17!49;UBERON:0005256!1.07e-16!47;UBERON:0002368!3.91e-13!60;UBERON:0002530!1.08e-11!65;UBERON:0009569!1.92e-11!66;UBERON:0002369!3.44e-11!7;UBERON:0006858!3.44e-11!7;UBERON:0000949!5.14e-10!72;UBERON:0003914!7.92e-09!47;UBERON:0005057!9.81e-08!51;UBERON:0005177!1.14e-07!85;UBERON:0002342!1.39e-07!10;UBERON:0005062!1.39e-07!10;UBERON:0003929!6.73e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.25e-31,23;UBERON:0009856,1.25e-31,23;UBERON:0002107,7.22e-28,22;UBERON:0007499,7.22e-28,22;UBERON:0006925,7.22e-28,22;UBERON:0009497,7.22e-28,22;UBERON:0000015,7.22e-28,22;UBERON:0002423,7.22e-28,22;UBERON:0006235,7.22e-28,22;UBERON:0008835,7.22e-28,22;UBERON:0003894,7.22e-28,22;UBERON:0004161,7.22e-28,22;UBERON:0008836,7.22e-28,22;UBERON:0005256,2.35e-24,45;UBERON:0002365,2.36e-24,25;UBERON:0002330,2.36e-24,25;UBERON:0005172,3.27e-22,49;UBERON:0005173,3.27e-22,49;UBERON:0002417,3.27e-22,49;UBERON:0000916,3.27e-22,49;UBERON:0002368,8.79e-18,60;UBERON:0003104,1.85e-17,61;UBERON:0009142,1.85e-17,61;UBERON:0002530,2.91e-16,65;UBERON:0009569,5.51e-16,66;UBERON:0000949,1.74e-14,72;UBERON:0005177,5.09e-13,79;UBERON:0003914,2.98e-12,47;UBERON:0002369,8.33e-12,7;UBERON:0006858,8.33e-12,7;UBERON:0002100,3.57e-11,90;UBERON:0003929,3.05e-10,55;UBERON:0000490,2.87e-08,66;UBERON:0005911,7.71e-08,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,3.77792234146472,3.24888208723835,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,2.22663208597237,0,1.21786191324856,1.15307748628029,0.753613202763113,0.823120949949934,3.14166478324189,0,0.433798070759735,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.324270453550071,1.64736847912849,4.31304619582064,3.72140947668503,3.12037673114561,11.6186283855671,7.53469136792031,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr15:99540899..99540911,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=275 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:99540899..99540911,+ | |||
|id=chr15:99540899..99540911,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.89e-08!5;CL:0000417!9.89e-08!5;CL:0000668!9.89e-08!5;CL:0000412!9.89e-08!5;CL:0000182!9.89e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.52e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.76e-22!23;UBERON:0009856!1.76e-22!23;UBERON:0002107!1.25e-20!22;UBERON:0007499!1.25e-20!22;UBERON:0006925!1.25e-20!22;UBERON:0009497!1.25e-20!22;UBERON:0000015!1.25e-20!22;UBERON:0002423!1.25e-20!22;UBERON:0006235!1.25e-20!22;UBERON:0008835!1.25e-20!22;UBERON:0003894!1.25e-20!22;UBERON:0004161!1.25e-20!22;UBERON:0008836!1.25e-20!22;UBERON:0002365!1.11e-17!25;UBERON:0002330!1.11e-17!25;UBERON:0005172!2.21e-17!49;UBERON:0005173!2.21e-17!49;UBERON:0002417!2.21e-17!49;UBERON:0000916!2.21e-17!49;UBERON:0005256!1.07e-16!47;UBERON:0002368!3.91e-13!60;UBERON:0002530!1.08e-11!65;UBERON:0009569!1.92e-11!66;UBERON:0002369!3.44e-11!7;UBERON:0006858!3.44e-11!7;UBERON:0000949!5.14e-10!72;UBERON:0003914!7.92e-09!47;UBERON:0005057!9.81e-08!51;UBERON:0005177!1.14e-07!85;UBERON:0002342!1.39e-07!10;UBERON:0005062!1.39e-07!10;UBERON:0003929!6.73e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.25e-31,23;UBERON:0009856,1.25e-31,23;UBERON:0002107,7.22e-28,22;UBERON:0007499,7.22e-28,22;UBERON:0006925,7.22e-28,22;UBERON:0009497,7.22e-28,22;UBERON:0000015,7.22e-28,22;UBERON:0002423,7.22e-28,22;UBERON:0006235,7.22e-28,22;UBERON:0008835,7.22e-28,22;UBERON:0003894,7.22e-28,22;UBERON:0004161,7.22e-28,22;UBERON:0008836,7.22e-28,22;UBERON:0005256,2.35e-24,45;UBERON:0002365,2.36e-24,25;UBERON:0002330,2.36e-24,25;UBERON:0005172,3.27e-22,49;UBERON:0005173,3.27e-22,49;UBERON:0002417,3.27e-22,49;UBERON:0000916,3.27e-22,49;UBERON:0002368,8.79e-18,60;UBERON:0003104,1.85e-17,61;UBERON:0009142,1.85e-17,61;UBERON:0002530,2.91e-16,65;UBERON:0009569,5.51e-16,66;UBERON:0000949,1.74e-14,72;UBERON:0005177,5.09e-13,79;UBERON:0003914,2.98e-12,47;UBERON:0002369,8.33e-12,7;UBERON:0006858,8.33e-12,7;UBERON:0002100,3.57e-11,90;UBERON:0003929,3.05e-10,55;UBERON:0000490,2.87e-08,66;UBERON:0005911,7.71e-08,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,3.77792234146472,3.24888208723835,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,2.22663208597237,0,1.21786191324856,1.15307748628029,0.753613202763113,0.823120949949934,3.14166478324189,0,0.433798070759735,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.324270453550071,1.64736847912849,4.31304619582064,3.72140947668503,3.12037673114561,11.6186283855671,7.53469136792031,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr15:99540899..99540911,+ | |||
}} |
Revision as of 11:54, 13 September 2013
Short description: | p@chr15:99540899..99540911, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:99540899..99540911, + |
Coexpression cluster: | MCL_coexpression_mm9:275 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.52e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.25e-31 | 23 |
sac | 1.25e-31 | 23 |
liver | 7.22e-28 | 22 |
epithelial sac | 7.22e-28 | 22 |
digestive gland | 7.22e-28 | 22 |
epithelium of foregut-midgut junction | 7.22e-28 | 22 |
anatomical boundary | 7.22e-28 | 22 |
hepatobiliary system | 7.22e-28 | 22 |
foregut-midgut junction | 7.22e-28 | 22 |
hepatic diverticulum | 7.22e-28 | 22 |
liver primordium | 7.22e-28 | 22 |
septum transversum | 7.22e-28 | 22 |
liver bud | 7.22e-28 | 22 |
trunk mesenchyme | 2.35e-24 | 45 |
exocrine gland | 2.36e-24 | 25 |
exocrine system | 2.36e-24 | 25 |
abdomen element | 3.27e-22 | 49 |
abdominal segment element | 3.27e-22 | 49 |
abdominal segment of trunk | 3.27e-22 | 49 |
abdomen | 3.27e-22 | 49 |
endocrine gland | 8.79e-18 | 60 |
mesenchyme | 1.85e-17 | 61 |
entire embryonic mesenchyme | 1.85e-17 | 61 |
gland | 2.91e-16 | 65 |
subdivision of trunk | 5.51e-16 | 66 |
endocrine system | 1.74e-14 | 72 |
trunk region element | 5.09e-13 | 79 |
epithelial tube | 2.98e-12 | 47 |
adrenal gland | 8.33e-12 | 7 |
adrenal/interrenal gland | 8.33e-12 | 7 |
trunk | 3.57e-11 | 90 |
gut epithelium | 3.05e-10 | 55 |
unilaminar epithelium | 2.87e-08 | 66 |
endo-epithelium | 7.71e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.