FFCP PHASE1:Mm9::chr16:13672712..13672721,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:13672712..13672721,-|id=chr16:13672712..13672721,-|ontology_enrichment_celltype=CL:0000791!1.94e-14!9;CL:0000789!1.94e-14!9;CL:0002420!1.94e-14!9;CL:0002419!1.94e-14!9;CL:0000790!1.94e-14!9;CL:0000624!3.80e-12!8;CL:0000084!1.26e-11!11;CL:0000827!1.26e-11!11;CL:0002563!1.14e-10!9;CL:0002251!1.14e-10!9;CL:0000838!1.43e-10!12;CL:0000063!1.02e-09!66;CL:0000542!1.12e-09!13;CL:0000051!1.12e-09!13;CL:0002250!7.75e-09!3;CL:0000223!7.96e-08!20;CL:0000066!1.14e-07!25;CL:0000893!1.78e-07!6;CL:0002489!1.78e-07!6;CL:0000898!1.78e-07!6;CL:0000809!1.78e-07!6;CL:0000810!1.78e-07!6;CL:0000895!1.78e-07!6;CL:0000808!1.78e-07!6;CL:0000894!1.78e-07!6;CL:0000806!1.78e-07!6;CL:0000807!1.78e-07!6;CL:0000805!1.78e-07!6;CL:0002425!1.78e-07!6;CL:0002436!1.78e-07!6;CL:0002427!1.78e-07!6;CL:0002428!1.78e-07!6;CL:0002429!1.78e-07!6;CL:0002433!1.78e-07!6;CL:0002431!1.78e-07!6;CL:0002432!1.78e-07!6;CL:0000738!3.69e-07!17;CL:0002087!3.69e-07!17|ontology_enrichment_celltype_v019_2=CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002250,5.71e-11,3;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.14e-10!9;UBERON:0004808!1.14e-10!9;UBERON:0001277!1.14e-10!9;UBERON:0001242!1.15e-09!13;UBERON:0000060!1.15e-09!13;UBERON:0001262!1.15e-09!13;UBERON:0004786!1.15e-09!13;UBERON:0000485!1.34e-08!11;UBERON:0003929!2.73e-08!55;UBERON:0000344!3.08e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0000485,1.36e-11,11;UBERON:0001242,5.52e-10,13;UBERON:0001262,5.52e-10,13;UBERON:0004786,5.52e-10,13;UBERON:0000344,8.43e-09,15|phase1_expression=0,1.04692622291808,0,0,0.500895729946347,0,0.233612640595526,0.774739940649458,0.985521055061667,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67473293712624,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:13672712..13672721,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:13672712..13672721,- | |||
|id=chr16:13672712..13672721,- | |||
|ontology_enrichment_celltype=CL:0000791!1.94e-14!9;CL:0000789!1.94e-14!9;CL:0002420!1.94e-14!9;CL:0002419!1.94e-14!9;CL:0000790!1.94e-14!9;CL:0000624!3.80e-12!8;CL:0000084!1.26e-11!11;CL:0000827!1.26e-11!11;CL:0002563!1.14e-10!9;CL:0002251!1.14e-10!9;CL:0000838!1.43e-10!12;CL:0000063!1.02e-09!66;CL:0000542!1.12e-09!13;CL:0000051!1.12e-09!13;CL:0002250!7.75e-09!3;CL:0000223!7.96e-08!20;CL:0000066!1.14e-07!25;CL:0000893!1.78e-07!6;CL:0002489!1.78e-07!6;CL:0000898!1.78e-07!6;CL:0000809!1.78e-07!6;CL:0000810!1.78e-07!6;CL:0000895!1.78e-07!6;CL:0000808!1.78e-07!6;CL:0000894!1.78e-07!6;CL:0000806!1.78e-07!6;CL:0000807!1.78e-07!6;CL:0000805!1.78e-07!6;CL:0002425!1.78e-07!6;CL:0002436!1.78e-07!6;CL:0002427!1.78e-07!6;CL:0002428!1.78e-07!6;CL:0002429!1.78e-07!6;CL:0002433!1.78e-07!6;CL:0002431!1.78e-07!6;CL:0002432!1.78e-07!6;CL:0000738!3.69e-07!17;CL:0002087!3.69e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002250,5.71e-11,3;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.14e-10!9;UBERON:0004808!1.14e-10!9;UBERON:0001277!1.14e-10!9;UBERON:0001242!1.15e-09!13;UBERON:0000060!1.15e-09!13;UBERON:0001262!1.15e-09!13;UBERON:0004786!1.15e-09!13;UBERON:0000485!1.34e-08!11;UBERON:0003929!2.73e-08!55;UBERON:0000344!3.08e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0000485,1.36e-11,11;UBERON:0001242,5.52e-10,13;UBERON:0001262,5.52e-10,13;UBERON:0004786,5.52e-10,13;UBERON:0000344,8.43e-09,15 | |||
|phase1_expression=0,1.04692622291808,0,0,0.500895729946347,0,0.233612640595526,0.774739940649458,0.985521055061667,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67473293712624,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:13672712..13672721,- | |||
}} |
Revision as of 11:59, 13 September 2013
Short description: | p@chr16:13672712..13672721, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:13672712..13672721, - |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
intestinal crypt stem cell | 5.71e-11 | 3 |
endo-epithelial cell | 8.43e-09 | 15 |
endodermal cell | 7.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
simple columnar epithelium | 1.36e-11 | 11 |
intestinal mucosa | 5.52e-10 | 13 |
wall of intestine | 5.52e-10 | 13 |
gastrointestinal system mucosa | 5.52e-10 | 13 |
mucosa | 8.43e-09 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.