FFCP PHASE1:Mm9::chr17:28495676..28495693,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22157|HGNC=|MCL_coexpression_id=97|UniProt=F7BGL3,Q3TP89|association_with_transcript=-37bp_to_ENSMUST00000148188,uc008bqu.1_5end|description=CAGE_peak_5_at_Tulp1_5end|id=chr17:28495676..28495693,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,9.07e-28,3;CL:0000351,9.07e-28,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!2.24e-13!17;UBERON:0002048!5.55e-12!14;UBERON:0000117!5.55e-12!14;UBERON:0000171!5.55e-12!14;UBERON:0000170!5.55e-12!14;UBERON:0005597!5.55e-12!14;UBERON:0000118!5.55e-12!14;UBERON:0005157!1.09e-10!27;UBERON:0005178!2.81e-09!17;UBERON:0005181!2.81e-09!17;UBERON:0002224!2.81e-09!17;UBERON:0000915!2.81e-09!17;UBERON:0008947!2.81e-09!17;UBERON:0003258!2.81e-09!17;UBERON:0000464!2.60e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.07e-28,3;UBERON:0000307,9.07e-28,3;UBERON:0007010,9.07e-28,3;UBERON:0005631,8.55e-27,3;UBERON:0000478,8.55e-27,3;UBERON:0000158,8.55e-27,3;UBERON:0001987,1.59e-18,2;UBERON:0003124,1.59e-18,2;UBERON:0004340,1.59e-18,2;UBERON:0004871,2.42e-12,3;UBERON:0001044,2.48e-10,1;UBERON:0001736,2.48e-10,1;UBERON:0003293,2.48e-10,1;UBERON:0003294,2.48e-10,1;UBERON:0001829,2.48e-10,1;UBERON:0010047,2.48e-10,1;UBERON:0000167,2.48e-10,1;UBERON:0006298,2.48e-10,1;UBERON:0000305,5.62e-10,1;UBERON:0005795,9.37e-10,4;UBERON:0000995,9.37e-10,4;UBERON:0004175,2.66e-09,9;UBERON:0003975,5.54e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.670025029767263,1.19021820443007,0.975668239288994,0.472905432318573,0.221464689648775,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0,0,3.75474732901937,6.14313005505079,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,8.07741107013003,0,0.149516546043979,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,7.99149432146633,9.33024108738547,13.7665385418544,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0|short_description=p5@Tulp1}} | ||
|EntrezGene=22157 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=F7BGL3,Q3TP89 | |||
|association_with_transcript=-37bp_to_ENSMUST00000148188,uc008bqu.1_5end | |||
|description=CAGE_peak_5_at_Tulp1_5end | |||
|id=chr17:28495676..28495693,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.07e-28,3;CL:0000351,9.07e-28,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!2.24e-13!17;UBERON:0002048!5.55e-12!14;UBERON:0000117!5.55e-12!14;UBERON:0000171!5.55e-12!14;UBERON:0000170!5.55e-12!14;UBERON:0005597!5.55e-12!14;UBERON:0000118!5.55e-12!14;UBERON:0005157!1.09e-10!27;UBERON:0005178!2.81e-09!17;UBERON:0005181!2.81e-09!17;UBERON:0002224!2.81e-09!17;UBERON:0000915!2.81e-09!17;UBERON:0008947!2.81e-09!17;UBERON:0003258!2.81e-09!17;UBERON:0000464!2.60e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.07e-28,3;UBERON:0000307,9.07e-28,3;UBERON:0007010,9.07e-28,3;UBERON:0005631,8.55e-27,3;UBERON:0000478,8.55e-27,3;UBERON:0000158,8.55e-27,3;UBERON:0001987,1.59e-18,2;UBERON:0003124,1.59e-18,2;UBERON:0004340,1.59e-18,2;UBERON:0004871,2.42e-12,3;UBERON:0001044,2.48e-10,1;UBERON:0001736,2.48e-10,1;UBERON:0003293,2.48e-10,1;UBERON:0003294,2.48e-10,1;UBERON:0001829,2.48e-10,1;UBERON:0010047,2.48e-10,1;UBERON:0000167,2.48e-10,1;UBERON:0006298,2.48e-10,1;UBERON:0000305,5.62e-10,1;UBERON:0005795,9.37e-10,4;UBERON:0000995,9.37e-10,4;UBERON:0004175,2.66e-09,9;UBERON:0003975,5.54e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.384341160854549,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.670025029767263,1.19021820443007,0.975668239288994,0.472905432318573,0.221464689648775,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0,0,3.75474732901937,6.14313005505079,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,8.07741107013003,0,0.149516546043979,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,7.99149432146633,9.33024108738547,13.7665385418544,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Tulp1 | |||
}} |
Revision as of 13:56, 13 September 2013
Short description: | p5@Tulp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tulp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -37bp_to_ENSMUST00000148188, uc008bqu.1_5end |
EntrezGene: | Tulp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.07e-28 | 3 |
trophoblast cell | 9.07e-28 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 9.07e-28 | 3 |
blastula | 9.07e-28 | 3 |
cleaving embryo | 9.07e-28 | 3 |
extraembryonic membrane | 8.55e-27 | 3 |
extraembryonic structure | 8.55e-27 | 3 |
membranous layer | 8.55e-27 | 3 |
placenta | 1.59e-18 | 2 |
chorion | 1.59e-18 | 2 |
allantois | 1.59e-18 | 2 |
somatic layer of lateral plate mesoderm | 2.42e-12 | 3 |
saliva-secreting gland | 2.48e-10 | 1 |
submandibular gland | 2.48e-10 | 1 |
gland of oral region | 2.48e-10 | 1 |
gland of foregut | 2.48e-10 | 1 |
major salivary gland | 2.48e-10 | 1 |
oral gland | 2.48e-10 | 1 |
oral cavity | 2.48e-10 | 1 |
submandibular gland primordium | 2.48e-10 | 1 |
amnion | 5.62e-10 | 1 |
embryonic uterus | 9.37e-10 | 4 |
uterus | 9.37e-10 | 4 |
internal genitalia | 2.66e-09 | 9 |
internal female genitalia | 5.54e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.