FFCP PHASE1:Hg19::chr5:158526459..158526481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3126|TSSclassifier=S|UniProt=Q9UH73,B4E2U8|association_with_transcript=0bp_to_AF208502,AK304438_5end|description=CAGE_peak_2_at_EBF1_5end|id=chr5:158526459..158526481,-|ontology_enrichment_celltype=CL:0000055!4.54e-15!180;CL:0000057!1.89e-12!75;CL:0000136!3.77e-07!15;CL:0002620!6.75e-07!23|ontology_enrichment_celltype_v019=CL:0002620;3.30e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,1.34e-11,76;CL:0000136,3.21e-07,15;CL:0002620,4.13e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.08e-21!115;UBERON:0000475!1.43e-12!365;UBERON:0000955!8.26e-11!69;UBERON:0006238!8.26e-11!69;UBERON:0002616!1.24e-10!59;UBERON:0001017!1.55e-09!82;UBERON:0001049!1.75e-09!57;UBERON:0005068!1.75e-09!57;UBERON:0006241!1.75e-09!57;UBERON:0007135!1.75e-09!57;UBERON:0000914!5.52e-09!83;UBERON:0002329!5.52e-09!83;UBERON:0003077!5.52e-09!83;UBERON:0003059!5.52e-09!83;UBERON:0007282!5.52e-09!83;UBERON:0009618!5.52e-09!83;UBERON:0007285!5.52e-09!83;UBERON:0005743!8.47e-09!86;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0000153!7.52e-08!129;UBERON:0007811!7.52e-08!129;UBERON:0000477!9.21e-08!286;UBERON:0004290!9.21e-08!70;UBERON:0000033!9.88e-08!123;UBERON:0002346!1.15e-07!90;UBERON:0003075!2.08e-07!86;UBERON:0007284!2.08e-07!86;UBERON:0002385!2.95e-07!63;UBERON:0001015!2.95e-07!63;UBERON:0000383!2.95e-07!63;UBERON:0000468!3.22e-07!659;UBERON:0000924!4.90e-07!173;UBERON:0006601!4.90e-07!173;UBERON:0000481!5.79e-07!347;UBERON:0004121!8.96e-07!169|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.47e-21,114;UBERON:0010314,1.27e-08,132;UBERON:0003076,2.53e-07,15;UBERON:0003057,2.53e-07,15;UBERON:0000955,8.14e-07,68;UBERON:0006238,8.14e-07,68|phase1_expression=8.17552706717505,3.63970890614671,5.77913056793482,5.00366491765652,5.81049422755474,0.872338524100369,0,0.631719873426831,9.66386824339403,0,0,0,0,5.69325223616215,7.95353701746998,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,2.58554221961255,1.83600622119828,0.313454721478088,0,0.136874425072884,0.627713197974014,0.305653622991805,0.328402357799783,0.314843125254717,0,0,1.39334510984468,0,0,0,0.387336002901508,0.995184627411951,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,2.42159801053347,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,2.27685187643779,0.587237189370939,2.6759125968766,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2568239576754,1.34140171940727,0.255725123687061,2.1686349143074,11.0294340339896,4.63508860674636,1.5905718941022,1.45990461090791,0.472674085820339,0.443458794925128,0.263504357079378,4.71524671791765,0,0,0,0,0,0.476981248610684,0,0,0,0.860234595106124,0,0,0,0,0,3.10100111003195,1.06729878806013,2.34304428935269,2.41697590265488,2.28081631715554,2.4406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,3.97577561356255,2.65924074495618,7.41491412554025,6.59724227722272,0.709336764396714,0.560677600142307,1.06748995729705,0,8.09148692039392,2.15537075311501,0.980771418680752,9.53551794163068,10.37116664064,1.64025002283658,5.61888138294577,1.1409436430889,1.64393548606981,1.05691048779388,1.94247533241758,1.26405726032024,5.71631679513701,1.71968044236475,5.78624374584287,0,1.97813543422845,1.82032272387605,0.718618141816238,0.673344455816265,2.50237039743928,2.49357703935765,1.31693286264251,4.29082914118628,3.00476117813194,0.113432183160021,5.02290979928813,3.20336083227851,2.33125091275518,4.50136644126603,2.67936576019941,5.66809188100384,5.02515512095292,6.24472429292685,2.63079913935236,9.59248342127635,3.12969655383818,5.4959659318396,2.84007674013291,1.71278566986988,0.847802961552438,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,3.12899064659632,2.57296375277154,0,9.28735856063958,5.0531563716871,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,1.62904152655162,1.03993478527958,0,0.115930404975077,1.40890433082986,1.44366447761074,1.38895653772983,1.14152491340759,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0.411309970813294,0,0,2.91540819297938,3.92364061949952,2.933531432838,0,0,1.690605505112,2.6593811658487,1.04007436911366,2.57207374262142,2.83698264046557,1.8649552531127,0.57191197463259,0.542621605391443,0,1.30294473717494,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,5.03212196532324,11.4861935834114,0,1.88215698667853,2.4657158706046,1.25342674267927,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,5.88919160251872,2.500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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |||
|TSSclassifier=S | |||
|UniProt=Q9UH73,B4E2U8 | |||
|association_with_transcript=0bp_to_AF208502,AK304438_5end | |||
|description=CAGE_peak_2_at_EBF1_5end | |||
|id=chr5:158526459..158526481,- | |||
|ontology_enrichment_celltype=CL:0000055!4.54e-15!180;CL:0000057!1.89e-12!75;CL:0000136!3.77e-07!15;CL:0002620!6.75e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.30e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.34e-11,76;CL:0000136,3.21e-07,15;CL:0002620,4.13e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.08e-21!115;UBERON:0000475!1.43e-12!365;UBERON:0000955!8.26e-11!69;UBERON:0006238!8.26e-11!69;UBERON:0002616!1.24e-10!59;UBERON:0001017!1.55e-09!82;UBERON:0001049!1.75e-09!57;UBERON:0005068!1.75e-09!57;UBERON:0006241!1.75e-09!57;UBERON:0007135!1.75e-09!57;UBERON:0000914!5.52e-09!83;UBERON:0002329!5.52e-09!83;UBERON:0003077!5.52e-09!83;UBERON:0003059!5.52e-09!83;UBERON:0007282!5.52e-09!83;UBERON:0009618!5.52e-09!83;UBERON:0007285!5.52e-09!83;UBERON:0005743!8.47e-09!86;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0000153!7.52e-08!129;UBERON:0007811!7.52e-08!129;UBERON:0000477!9.21e-08!286;UBERON:0004290!9.21e-08!70;UBERON:0000033!9.88e-08!123;UBERON:0002346!1.15e-07!90;UBERON:0003075!2.08e-07!86;UBERON:0007284!2.08e-07!86;UBERON:0002385!2.95e-07!63;UBERON:0001015!2.95e-07!63;UBERON:0000383!2.95e-07!63;UBERON:0000468!3.22e-07!659;UBERON:0000924!4.90e-07!173;UBERON:0006601!4.90e-07!173;UBERON:0000481!5.79e-07!347;UBERON:0004121!8.96e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.47e-21,114;UBERON:0010314,1.27e-08,132;UBERON:0003076,2.53e-07,15;UBERON:0003057,2.53e-07,15;UBERON:0000955,8.14e-07,68;UBERON:0006238,8.14e-07,68 | |||
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| |||
|short_description=p2@EBF1 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p2@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF208502, AK304438_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | Q9UH73B4E2U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.34e-11 | 76 |
fat cell | 3.21e-07 | 15 |
skin fibroblast | 4.13e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.47e-21 | 114 |
structure with developmental contribution from neural crest | 1.27e-08 | 132 |
posterior neural tube | 2.53e-07 | 15 |
chordal neural plate | 2.53e-07 | 15 |
brain | 8.14e-07 | 68 |
future brain | 8.14e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.