FFCP PHASE1:Mm9::chr17:84555761..84555773,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:84555761..84555773,-|id=chr17:84555761..84555773,-|ontology_enrichment_celltype=CL:0002563!4.86e-08!9;CL:0002251!4.86e-08!9|ontology_enrichment_celltype_v019_2=CL:0002250,1.32e-14,3;CL:0002563,1.99e-08,9;CL:0002251,1.99e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.31e-21!43;UBERON:0005409!5.57e-17!59;UBERON:0000344!1.16e-14!15;UBERON:0001242!1.03e-12!13;UBERON:0000060!1.03e-12!13;UBERON:0001262!1.03e-12!13;UBERON:0004786!1.03e-12!13;UBERON:0004923!1.81e-10!24;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0001007!3.36e-08!128;UBERON:0001555!3.36e-08!128;UBERON:0007026!3.36e-08!128;UBERON:0003350!4.86e-08!9;UBERON:0004808!4.86e-08!9;UBERON:0001277!4.86e-08!9;UBERON:0004921!3.17e-07!126;UBERON:0004185!3.17e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.45e-42,31;UBERON:0005409,7.72e-30,47;UBERON:0001242,5.97e-16,13;UBERON:0001262,5.97e-16,13;UBERON:0004786,5.97e-16,13;UBERON:0000344,1.02e-13,15;UBERON:0004921,1.47e-10,114;UBERON:0001007,2.53e-10,116;UBERON:0001555,2.53e-10,116;UBERON:0007026,2.53e-10,116;UBERON:0004119,4.28e-10,118;UBERON:0000925,4.28e-10,118;UBERON:0006595,4.28e-10,118;UBERON:0002108,1.47e-09,4;UBERON:0001155,2.20e-09,2;UBERON:0000059,2.20e-09,2;UBERON:0003350,1.99e-08,9;UBERON:0004808,1.99e-08,9;UBERON:0001277,1.99e-08,9;UBERON:0004923,2.87e-08,24;UBERON:0000485,6.67e-07,11|phase1_expression=0,0.697950815278722,0,3.0246421130683,0.500895729946347,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.22940928106717,0,0.86152399231815,0,1.14014051673824,1.76421090831952,0.221730510655305,0,0,0,7.22129049378186,5.15327400611326,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.793351699990633,0,0.464473343720877,1.15980715189884,2.01683524623343,2.44615848229357,2.28270751335071,2.84717436926707,0.658795818896044,1.25667604400135,0.795825888164603,0.779856348476481,0,2.16138049874694,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.379419222745544,0.738050739898011,2.66897837330337,2.71473760627961,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.64183841918363,0,0.25347929989024,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0,0.685738504770831,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr17:84555761..84555773,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:84555761..84555773,- | |||
|id=chr17:84555761..84555773,- | |||
|ontology_enrichment_celltype=CL:0002563!4.86e-08!9;CL:0002251!4.86e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.32e-14,3;CL:0002563,1.99e-08,9;CL:0002251,1.99e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.31e-21!43;UBERON:0005409!5.57e-17!59;UBERON:0000344!1.16e-14!15;UBERON:0001242!1.03e-12!13;UBERON:0000060!1.03e-12!13;UBERON:0001262!1.03e-12!13;UBERON:0004786!1.03e-12!13;UBERON:0004923!1.81e-10!24;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0001007!3.36e-08!128;UBERON:0001555!3.36e-08!128;UBERON:0007026!3.36e-08!128;UBERON:0003350!4.86e-08!9;UBERON:0004808!4.86e-08!9;UBERON:0001277!4.86e-08!9;UBERON:0004921!3.17e-07!126;UBERON:0004185!3.17e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.45e-42,31;UBERON:0005409,7.72e-30,47;UBERON:0001242,5.97e-16,13;UBERON:0001262,5.97e-16,13;UBERON:0004786,5.97e-16,13;UBERON:0000344,1.02e-13,15;UBERON:0004921,1.47e-10,114;UBERON:0001007,2.53e-10,116;UBERON:0001555,2.53e-10,116;UBERON:0007026,2.53e-10,116;UBERON:0004119,4.28e-10,118;UBERON:0000925,4.28e-10,118;UBERON:0006595,4.28e-10,118;UBERON:0002108,1.47e-09,4;UBERON:0001155,2.20e-09,2;UBERON:0000059,2.20e-09,2;UBERON:0003350,1.99e-08,9;UBERON:0004808,1.99e-08,9;UBERON:0001277,1.99e-08,9;UBERON:0004923,2.87e-08,24;UBERON:0000485,6.67e-07,11 | |||
|phase1_expression=0,0.697950815278722,0,3.0246421130683,0.500895729946347,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.22940928106717,0,0.86152399231815,0,1.14014051673824,1.76421090831952,0.221730510655305,0,0,0,7.22129049378186,5.15327400611326,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.793351699990633,0,0.464473343720877,1.15980715189884,2.01683524623343,2.44615848229357,2.28270751335071,2.84717436926707,0.658795818896044,1.25667604400135,0.795825888164603,0.779856348476481,0,2.16138049874694,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.379419222745544,0.738050739898011,2.66897837330337,2.71473760627961,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.64183841918363,0,0.25347929989024,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0,0.685738504770831,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:84555761..84555773,- | |||
}} |
Revision as of 15:28, 13 September 2013
Short description: | p@chr17:84555761..84555773, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:84555761..84555773, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.32e-14 | 3 |
intestinal epithelial cell | 1.99e-08 | 9 |
epithelial cell of alimentary canal | 1.99e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.45e-42 | 31 |
gastrointestinal system | 7.72e-30 | 47 |
intestinal mucosa | 5.97e-16 | 13 |
wall of intestine | 5.97e-16 | 13 |
gastrointestinal system mucosa | 5.97e-16 | 13 |
mucosa | 1.02e-13 | 15 |
subdivision of digestive tract | 1.47e-10 | 114 |
digestive system | 2.53e-10 | 116 |
digestive tract | 2.53e-10 | 116 |
primitive gut | 2.53e-10 | 116 |
endoderm-derived structure | 4.28e-10 | 118 |
endoderm | 4.28e-10 | 118 |
presumptive endoderm | 4.28e-10 | 118 |
small intestine | 1.47e-09 | 4 |
colon | 2.20e-09 | 2 |
large intestine | 2.20e-09 | 2 |
epithelium of mucosa | 1.99e-08 | 9 |
gastrointestinal system epithelium | 1.99e-08 | 9 |
intestinal epithelium | 1.99e-08 | 9 |
organ component layer | 2.87e-08 | 24 |
simple columnar epithelium | 6.67e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.