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FFCP PHASE1:Hg19::chr5:57878034..57878045,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=115827|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30269|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_ENST00000513316_5end|coexpression_cluster_id=C137|description=CAGE_peak_9_at_RAB3C_5end|id=chr5:57878034..57878045,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;7.77e-14;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4556;1.01e-09;3|ontology_enrichment_disease_v019_2=DOID:4556,1.01e-09,3|ontology_enrichment_uberon=UBERON:0001049!3.51e-48!57;UBERON:0005068!3.51e-48!57;UBERON:0006241!3.51e-48!57;UBERON:0007135!3.51e-48!57;UBERON:0001017!8.34e-42!82;UBERON:0005743!1.38e-41!86;UBERON:0002616!3.40e-40!59;UBERON:0002780!4.72e-39!41;UBERON:0001890!4.72e-39!41;UBERON:0006240!4.72e-39!41;UBERON:0000073!7.83e-39!94;UBERON:0001016!7.83e-39!94;UBERON:0003080!5.71e-38!42;UBERON:0002020!1.45e-37!34;UBERON:0003528!1.45e-37!34;UBERON:0001893!5.08e-37!34;UBERON:0001869!4.18e-36!32;UBERON:0007023!1.00e-35!115;UBERON:0002791!6.19e-35!33;UBERON:0000955!6.51e-35!69;UBERON:0006238!6.51e-35!69;UBERON:0003075!5.62e-33!86;UBERON:0007284!5.62e-33!86;UBERON:0002619!1.90e-31!22;UBERON:0002346!4.35e-31!90;UBERON:0000956!2.77e-27!25;UBERON:0000203!2.77e-27!25;UBERON:0001950!1.33e-26!20;UBERON:0003056!4.67e-26!61;UBERON:0000033!2.39e-18!123;UBERON:0004121!4.03e-17!169;UBERON:0000153!4.38e-17!129;UBERON:0007811!4.38e-17!129;UBERON:0000924!1.72e-16!173;UBERON:0006601!1.72e-16!173;UBERON:0000200!1.13e-11!6;UBERON:0002308!1.24e-11!9;UBERON:0000125!1.24e-11!9;UBERON:0003076!3.91e-11!15;UBERON:0003057!3.91e-11!15;UBERON:0000025!2.38e-10!194;UBERON:0000988!1.10e-09!3;UBERON:0001872!1.73e-09!5;UBERON:0000349!2.11e-09!5;UBERON:0002298!5.04e-09!8;UBERON:0002021!7.25e-09!5;UBERON:0004111!1.82e-08!241;UBERON:0004733!5.07e-08!12;UBERON:0002028!5.07e-08!12;UBERON:0007277!5.07e-08!12;UBERON:0002420!5.18e-08!9;UBERON:0007245!5.18e-08!9;UBERON:0010009!5.18e-08!9;UBERON:0010011!5.18e-08!9;UBERON:0000454!5.18e-08!9;UBERON:0004732!2.40e-07!13;UBERON:0000477!2.48e-07!286;UBERON:0002148!2.99e-07!2;UBERON:0009662!2.99e-07!2;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0009663!5.26e-07!7;UBERON:0001954!5.38e-07!2;UBERON:0003022!5.38e-07!2;UBERON:0002421!5.38e-07!2;UBERON:0002600!5.38e-07!2;UBERON:0001870!5.71e-07!2|ontology_enrichment_uberon_v019=UBERON:0000125;3.17e-25;9!UBERON:0002308;3.17e-25;9!UBERON:0009663;4.69e-15;7!UBERON:0001954;7.77e-14;2!UBERON:0003022;7.77e-14;2!UBERON:0002421;7.77e-14;2!UBERON:0002600;7.77e-14;2!UBERON:0001873;1.21e-13;2!UBERON:0002148;1.21e-13;2!UBERON:0001875;1.21e-13;2!UBERON:0006331;1.21e-13;2!UBERON:0009662;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0002420;6.16e-12;9!UBERON:0007245;6.16e-12;9!UBERON:0010009;6.16e-12;9!UBERON:0010011;6.16e-12;9!UBERON:0000454;6.16e-12;9!UBERON:0003528;2.04e-11;34!UBERON:0002020;2.04e-11;34!UBERON:0000988;1.53e-09;3!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4!UBERON:0002791;2.53e-07;32!UBERON:0001869;2.53e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.44e-25,9;UBERON:0002308,3.44e-25,9;UBERON:0009663,5.41e-15,7;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002148,1.07e-13,2;UBERON:0006331,1.07e-13,2;UBERON:0009662,1.07e-13,2;UBERON:0001873,1.21e-13,2;UBERON:0010122,1.21e-13,2;UBERON:0001875,1.55e-13,2;UBERON:0006514,1.55e-13,2;UBERON:0002420,6.88e-12,9;UBERON:0007245,6.88e-12,9;UBERON:0010009,6.88e-12,9;UBERON:0010011,6.88e-12,9;UBERON:0000454,6.88e-12,9;UBERON:0003528,9.91e-12,34;UBERON:0002020,9.91e-12,34;UBERON:0000988,1.41e-09,3;UBERON:0005383,1.54e-09,3;UBERON:0005382,1.54e-09,3;UBERON:0000073,9.60e-08,53;UBERON:0002616,9.60e-08,53;UBERON:0001017,1.09e-07,81;UBERON:0000369,1.80e-07,4;UBERON:0002435,1.80e-07,4;UBERON:0000204,1.80e-07,4;UBERON:0010082,1.80e-07,4;UBERON:0002791,2.12e-07,32;UBERON:0001869,2.12e-07,32;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56;UBERON:0001893,5.19e-07,34;UBERON:0001016,5.97e-07,89|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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|DPIdataset=robustDPI
|EntrezGene=115827
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=30269
|TSSclassifier=S
|UniProt=
|association_with_transcript=-2bp_to_ENST00000513316_5end
|coexpression_cluster_id=C137
|description=CAGE_peak_9_at_RAB3C_5end
|id=chr5:57878034..57878045,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000047;7.77e-14;2
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:4556;1.01e-09;3
|ontology_enrichment_disease_v019_2=DOID:4556,1.01e-09,3
|ontology_enrichment_uberon=UBERON:0001049!3.51e-48!57;UBERON:0005068!3.51e-48!57;UBERON:0006241!3.51e-48!57;UBERON:0007135!3.51e-48!57;UBERON:0001017!8.34e-42!82;UBERON:0005743!1.38e-41!86;UBERON:0002616!3.40e-40!59;UBERON:0002780!4.72e-39!41;UBERON:0001890!4.72e-39!41;UBERON:0006240!4.72e-39!41;UBERON:0000073!7.83e-39!94;UBERON:0001016!7.83e-39!94;UBERON:0003080!5.71e-38!42;UBERON:0002020!1.45e-37!34;UBERON:0003528!1.45e-37!34;UBERON:0001893!5.08e-37!34;UBERON:0001869!4.18e-36!32;UBERON:0007023!1.00e-35!115;UBERON:0002791!6.19e-35!33;UBERON:0000955!6.51e-35!69;UBERON:0006238!6.51e-35!69;UBERON:0003075!5.62e-33!86;UBERON:0007284!5.62e-33!86;UBERON:0002619!1.90e-31!22;UBERON:0002346!4.35e-31!90;UBERON:0000956!2.77e-27!25;UBERON:0000203!2.77e-27!25;UBERON:0001950!1.33e-26!20;UBERON:0003056!4.67e-26!61;UBERON:0000033!2.39e-18!123;UBERON:0004121!4.03e-17!169;UBERON:0000153!4.38e-17!129;UBERON:0007811!4.38e-17!129;UBERON:0000924!1.72e-16!173;UBERON:0006601!1.72e-16!173;UBERON:0000200!1.13e-11!6;UBERON:0002308!1.24e-11!9;UBERON:0000125!1.24e-11!9;UBERON:0003076!3.91e-11!15;UBERON:0003057!3.91e-11!15;UBERON:0000025!2.38e-10!194;UBERON:0000988!1.10e-09!3;UBERON:0001872!1.73e-09!5;UBERON:0000349!2.11e-09!5;UBERON:0002298!5.04e-09!8;UBERON:0002021!7.25e-09!5;UBERON:0004111!1.82e-08!241;UBERON:0004733!5.07e-08!12;UBERON:0002028!5.07e-08!12;UBERON:0007277!5.07e-08!12;UBERON:0002420!5.18e-08!9;UBERON:0007245!5.18e-08!9;UBERON:0010009!5.18e-08!9;UBERON:0010011!5.18e-08!9;UBERON:0000454!5.18e-08!9;UBERON:0004732!2.40e-07!13;UBERON:0000477!2.48e-07!286;UBERON:0002148!2.99e-07!2;UBERON:0009662!2.99e-07!2;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0009663!5.26e-07!7;UBERON:0001954!5.38e-07!2;UBERON:0003022!5.38e-07!2;UBERON:0002421!5.38e-07!2;UBERON:0002600!5.38e-07!2;UBERON:0001870!5.71e-07!2
|ontology_enrichment_uberon_v019=UBERON:0000125;3.17e-25;9!UBERON:0002308;3.17e-25;9!UBERON:0009663;4.69e-15;7!UBERON:0001954;7.77e-14;2!UBERON:0003022;7.77e-14;2!UBERON:0002421;7.77e-14;2!UBERON:0002600;7.77e-14;2!UBERON:0001873;1.21e-13;2!UBERON:0002148;1.21e-13;2!UBERON:0001875;1.21e-13;2!UBERON:0006331;1.21e-13;2!UBERON:0009662;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0002420;6.16e-12;9!UBERON:0007245;6.16e-12;9!UBERON:0010009;6.16e-12;9!UBERON:0010011;6.16e-12;9!UBERON:0000454;6.16e-12;9!UBERON:0003528;2.04e-11;34!UBERON:0002020;2.04e-11;34!UBERON:0000988;1.53e-09;3!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4!UBERON:0002791;2.53e-07;32!UBERON:0001869;2.53e-07;32
|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.44e-25,9;UBERON:0002308,3.44e-25,9;UBERON:0009663,5.41e-15,7;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002148,1.07e-13,2;UBERON:0006331,1.07e-13,2;UBERON:0009662,1.07e-13,2;UBERON:0001873,1.21e-13,2;UBERON:0010122,1.21e-13,2;UBERON:0001875,1.55e-13,2;UBERON:0006514,1.55e-13,2;UBERON:0002420,6.88e-12,9;UBERON:0007245,6.88e-12,9;UBERON:0010009,6.88e-12,9;UBERON:0010011,6.88e-12,9;UBERON:0000454,6.88e-12,9;UBERON:0003528,9.91e-12,34;UBERON:0002020,9.91e-12,34;UBERON:0000988,1.41e-09,3;UBERON:0005383,1.54e-09,3;UBERON:0005382,1.54e-09,3;UBERON:0000073,9.60e-08,53;UBERON:0002616,9.60e-08,53;UBERON:0001017,1.09e-07,81;UBERON:0000369,1.80e-07,4;UBERON:0002435,1.80e-07,4;UBERON:0000204,1.80e-07,4;UBERON:0010082,1.80e-07,4;UBERON:0002791,2.12e-07,32;UBERON:0001869,2.12e-07,32;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56;UBERON:0001893,5.19e-07,34;UBERON:0001016,5.97e-07,89
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|short_description=p9@RAB3C
}}

Revision as of 15:58, 13 September 2013

Short description:p9@RAB3C
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_RAB3C_5end
Coexpression cluster:C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic
Association with transcript: -2bp_to_ENST00000513316_5end
EntrezGene:RAB3C
HGNC: 30269
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.