FFCP PHASE1:Mm9::chr18:84256138..84256150,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=110796|HGNC=|MCL_coexpression_id=93|UniProt=Q5DTH5|association_with_transcript=-184bp_to_ENSMUST00000060303,NM_001081300,uc008fum.1_5end|description=CAGE_peak_7_at_Tshz1_5end|id=chr18:84256138..84256150,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.03e-18,3;CL:0000540,4.20e-08,33;CL:0000047,4.20e-08,33;CL:0000031,4.20e-08,33;CL:0000404,4.20e-08,33;CL:0000393,9.28e-07,39;CL:0000211,9.28e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.33e-19,5;UBERON:0002315,3.33e-19,5;UBERON:0002257,1.03e-18,3;UBERON:0002240,4.68e-16,6;UBERON:0005174,4.68e-16,6;UBERON:0001137,4.68e-16,6;UBERON:0000013,1.11e-08,3;UBERON:0002102,2.74e-08,7;UBERON:0004710,2.74e-08,7;UBERON:0005419,2.74e-08,7;UBERON:0005417,2.74e-08,7;UBERON:0005729,2.74e-08,7;UBERON:0003076,3.83e-08,12;UBERON:0003057,3.83e-08,12;UBERON:0010708,2.59e-07,8|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0.258246646883153,2.67498572088167,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0.606949382578793,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,0.883474163806454,0.979926393719632,0.958454710182364,0,0,0.127687338085188,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.15279824777681,2.06240009831567,1.56608848879013,3.54158947068071,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,2.51308704225729,0.173824320192276,0,0.62336413367868,0.324482526135515,0.407357455401265,0,0,0,0,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0,0.517406741478031,0.862271971731369,5.67318240503458,1.40760899331159,1.97276159184817,0.834141747676794,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0,0.222798674082394,0,0,1.75353514746787,1.18586333383957,18.315315036043,0.709700426041343,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.632671987162271,0.813277868507395,0.756037385752609,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.576226371643824,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.470546902076653,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p7@Tshz1}} | ||
|EntrezGene=110796 | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|UniProt=Q5DTH5 | |||
|association_with_transcript=-184bp_to_ENSMUST00000060303,NM_001081300,uc008fum.1_5end | |||
|description=CAGE_peak_7_at_Tshz1_5end | |||
|id=chr18:84256138..84256150,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.03e-18,3;CL:0000540,4.20e-08,33;CL:0000047,4.20e-08,33;CL:0000031,4.20e-08,33;CL:0000404,4.20e-08,33;CL:0000393,9.28e-07,39;CL:0000211,9.28e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.33e-19,5;UBERON:0002315,3.33e-19,5;UBERON:0002257,1.03e-18,3;UBERON:0002240,4.68e-16,6;UBERON:0005174,4.68e-16,6;UBERON:0001137,4.68e-16,6;UBERON:0000013,1.11e-08,3;UBERON:0002102,2.74e-08,7;UBERON:0004710,2.74e-08,7;UBERON:0005419,2.74e-08,7;UBERON:0005417,2.74e-08,7;UBERON:0005729,2.74e-08,7;UBERON:0003076,3.83e-08,12;UBERON:0003057,3.83e-08,12;UBERON:0010708,2.59e-07,8 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0.258246646883153,2.67498572088167,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0.606949382578793,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,0.883474163806454,0.979926393719632,0.958454710182364,0,0,0.127687338085188,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.15279824777681,2.06240009831567,1.56608848879013,3.54158947068071,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,2.51308704225729,0.173824320192276,0,0.62336413367868,0.324482526135515,0.407357455401265,0,0,0,0,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0,0.517406741478031,0.862271971731369,5.67318240503458,1.40760899331159,1.97276159184817,0.834141747676794,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0,0.222798674082394,0,0,1.75353514746787,1.18586333383957,18.315315036043,0.709700426041343,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.632671987162271,0.813277868507395,0.756037385752609,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.576226371643824,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.470546902076653,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p7@Tshz1 | |||
}} |
Revision as of 16:54, 13 September 2013
Short description: | p7@Tshz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tshz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | -184bp_to_ENSMUST00000060303, NM_001081300, uc008fum.1_5end |
EntrezGene: | Tshz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.03e-18 | 3 |
neuron | 4.20e-08 | 33 |
neuronal stem cell | 4.20e-08 | 33 |
neuroblast | 4.20e-08 | 33 |
electrically signaling cell | 4.20e-08 | 33 |
electrically responsive cell | 9.28e-07 | 39 |
electrically active cell | 9.28e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 3.33e-19 | 5 |
gray matter of spinal cord | 3.33e-19 | 5 |
ventral horn of spinal cord | 1.03e-18 | 3 |
spinal cord | 4.68e-16 | 6 |
dorsal region element | 4.68e-16 | 6 |
dorsum | 4.68e-16 | 6 |
sympathetic nervous system | 1.11e-08 | 3 |
forelimb | 2.74e-08 | 7 |
pectoral appendage | 2.74e-08 | 7 |
pectoral appendage bud | 2.74e-08 | 7 |
forelimb bud | 2.74e-08 | 7 |
forelimb/pectoral fin field | 2.74e-08 | 7 |
posterior neural tube | 3.83e-08 | 12 |
chordal neural plate | 3.83e-08 | 12 |
pectoral complex | 2.59e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.