FFCP PHASE1:Mm9::chr19:11566393..11566398,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=666926|HGNC=|MCL_coexpression_id=18|UniProt=E9PZI3|association_with_transcript=-129bp_to_ENSMUST00000079855,NM_001164202,uc012bix.1_5end|description=CAGE_peak_3_at_Gm8369_5end|id=chr19:11566393..11566398,+|ontology_enrichment_celltype=CL:0002031!2.36e-22!25;CL:0000553!6.09e-20!6;CL:0000556!6.09e-20!6;CL:0000988!7.87e-17!32;CL:0002032!7.87e-17!32;CL:0000037!7.87e-17!32;CL:0000566!7.87e-17!32;CL:0000837!7.87e-17!32;CL:0000791!1.47e-15!9;CL:0000789!1.47e-15!9;CL:0002420!1.47e-15!9;CL:0002419!1.47e-15!9;CL:0000790!1.47e-15!9;CL:0000838!2.90e-15!12;CL:0000542!5.35e-14!13;CL:0000051!5.35e-14!13;CL:0000050!4.46e-13!9;CL:0000624!6.61e-13!8;CL:0000084!1.42e-12!11;CL:0000827!1.42e-12!11;CL:0000893!3.04e-12!6;CL:0002489!3.04e-12!6;CL:0000898!3.04e-12!6;CL:0000809!3.04e-12!6;CL:0000810!3.04e-12!6;CL:0000895!3.04e-12!6;CL:0000808!3.04e-12!6;CL:0000894!3.04e-12!6;CL:0000806!3.04e-12!6;CL:0000807!3.04e-12!6;CL:0000805!3.04e-12!6;CL:0002425!3.04e-12!6;CL:0002436!3.04e-12!6;CL:0002427!3.04e-12!6;CL:0002428!3.04e-12!6;CL:0002429!3.04e-12!6;CL:0002433!3.04e-12!6;CL:0002431!3.04e-12!6;CL:0002432!3.04e-12!6;CL:0002320!7.86e-11!46;CL:0000134!7.86e-11!46;CL:0000414!1.41e-10!11;CL:0002027!1.86e-10!3;CL:0002006!1.86e-10!3;CL:0002024!1.86e-10!3;CL:0000738!2.01e-10!17;CL:0002087!2.01e-10!17;CL:0000839!7.66e-09!13;CL:0000219!8.35e-09!54;CL:0000763!4.70e-07!16|ontology_enrichment_celltype_v019_2=CL:0000553,2.29e-26,6;CL:0000556,2.29e-26,6;CL:0000050,9.45e-18,9;CL:0002031,4.21e-14,25;CL:0000839,2.01e-12,13;CL:0000945,1.83e-11,1;CL:0000236,1.83e-11,1;CL:0000826,1.83e-11,1;CL:0000988,5.14e-11,32;CL:0002032,5.14e-11,32;CL:0000037,5.14e-11,32;CL:0000837,5.14e-11,32;CL:0000763,3.63e-10,16;CL:0000049,1.29e-08,19;CL:0002320,1.23e-07,46;CL:0000134,1.23e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.51e-22!48;UBERON:0002390!1.34e-16!45;UBERON:0003061!1.34e-16!45;UBERON:0002405!5.12e-14!70;UBERON:0002384!7.86e-11!46;UBERON:0002465!1.20e-10!3;UBERON:0004177!1.93e-10!29;UBERON:0002106!1.90e-08!6;UBERON:0004457!1.90e-08!6;UBERON:0000042!1.90e-08!6;UBERON:0004854!1.90e-08!6;UBERON:0009034!1.90e-08!6;UBERON:0002095!1.90e-08!6;UBERON:0004782!1.90e-08!6;UBERON:0003281!1.90e-08!6;UBERON:0009664!1.90e-08!6;UBERON:0002296!1.90e-08!6;UBERON:0005602!1.90e-08!6;UBERON:0001179!1.90e-08!6;UBERON:0006293!1.90e-08!6;UBERON:0003081!6.84e-08!88;UBERON:0001962!1.68e-07!2;UBERON:0001961!1.68e-07!2;UBERON:0001744!1.68e-07!2;UBERON:0002371!4.70e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.73e-14,3;UBERON:0000029,3.65e-11,1;UBERON:0001097,3.65e-11,1;UBERON:0003968,3.65e-11,1;UBERON:0001467,3.65e-11,1;UBERON:0002371,3.63e-10,16;UBERON:0002193,8.55e-10,48;UBERON:0002405,8.55e-10,48;UBERON:0002384,1.23e-07,46;UBERON:0001474,1.76e-07,22;UBERON:0004765,1.76e-07,22;UBERON:0001434,1.76e-07,22|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.40788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.999329285446988,1.01237633694913,0.699561878128147,3.47008381894061,6.7186072466812,7.63901373236454,0.0850432901510698,0,0,1.59992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.88406825470758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Gm8369}} | ||
|EntrezGene=666926 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=E9PZI3 | |||
|association_with_transcript=-129bp_to_ENSMUST00000079855,NM_001164202,uc012bix.1_5end | |||
|description=CAGE_peak_3_at_Gm8369_5end | |||
|id=chr19:11566393..11566398,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.36e-22!25;CL:0000553!6.09e-20!6;CL:0000556!6.09e-20!6;CL:0000988!7.87e-17!32;CL:0002032!7.87e-17!32;CL:0000037!7.87e-17!32;CL:0000566!7.87e-17!32;CL:0000837!7.87e-17!32;CL:0000791!1.47e-15!9;CL:0000789!1.47e-15!9;CL:0002420!1.47e-15!9;CL:0002419!1.47e-15!9;CL:0000790!1.47e-15!9;CL:0000838!2.90e-15!12;CL:0000542!5.35e-14!13;CL:0000051!5.35e-14!13;CL:0000050!4.46e-13!9;CL:0000624!6.61e-13!8;CL:0000084!1.42e-12!11;CL:0000827!1.42e-12!11;CL:0000893!3.04e-12!6;CL:0002489!3.04e-12!6;CL:0000898!3.04e-12!6;CL:0000809!3.04e-12!6;CL:0000810!3.04e-12!6;CL:0000895!3.04e-12!6;CL:0000808!3.04e-12!6;CL:0000894!3.04e-12!6;CL:0000806!3.04e-12!6;CL:0000807!3.04e-12!6;CL:0000805!3.04e-12!6;CL:0002425!3.04e-12!6;CL:0002436!3.04e-12!6;CL:0002427!3.04e-12!6;CL:0002428!3.04e-12!6;CL:0002429!3.04e-12!6;CL:0002433!3.04e-12!6;CL:0002431!3.04e-12!6;CL:0002432!3.04e-12!6;CL:0002320!7.86e-11!46;CL:0000134!7.86e-11!46;CL:0000414!1.41e-10!11;CL:0002027!1.86e-10!3;CL:0002006!1.86e-10!3;CL:0002024!1.86e-10!3;CL:0000738!2.01e-10!17;CL:0002087!2.01e-10!17;CL:0000839!7.66e-09!13;CL:0000219!8.35e-09!54;CL:0000763!4.70e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.29e-26,6;CL:0000556,2.29e-26,6;CL:0000050,9.45e-18,9;CL:0002031,4.21e-14,25;CL:0000839,2.01e-12,13;CL:0000945,1.83e-11,1;CL:0000236,1.83e-11,1;CL:0000826,1.83e-11,1;CL:0000988,5.14e-11,32;CL:0002032,5.14e-11,32;CL:0000037,5.14e-11,32;CL:0000837,5.14e-11,32;CL:0000763,3.63e-10,16;CL:0000049,1.29e-08,19;CL:0002320,1.23e-07,46;CL:0000134,1.23e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.51e-22!48;UBERON:0002390!1.34e-16!45;UBERON:0003061!1.34e-16!45;UBERON:0002405!5.12e-14!70;UBERON:0002384!7.86e-11!46;UBERON:0002465!1.20e-10!3;UBERON:0004177!1.93e-10!29;UBERON:0002106!1.90e-08!6;UBERON:0004457!1.90e-08!6;UBERON:0000042!1.90e-08!6;UBERON:0004854!1.90e-08!6;UBERON:0009034!1.90e-08!6;UBERON:0002095!1.90e-08!6;UBERON:0004782!1.90e-08!6;UBERON:0003281!1.90e-08!6;UBERON:0009664!1.90e-08!6;UBERON:0002296!1.90e-08!6;UBERON:0005602!1.90e-08!6;UBERON:0001179!1.90e-08!6;UBERON:0006293!1.90e-08!6;UBERON:0003081!6.84e-08!88;UBERON:0001962!1.68e-07!2;UBERON:0001961!1.68e-07!2;UBERON:0001744!1.68e-07!2;UBERON:0002371!4.70e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.73e-14,3;UBERON:0000029,3.65e-11,1;UBERON:0001097,3.65e-11,1;UBERON:0003968,3.65e-11,1;UBERON:0001467,3.65e-11,1;UBERON:0002371,3.63e-10,16;UBERON:0002193,8.55e-10,48;UBERON:0002405,8.55e-10,48;UBERON:0002384,1.23e-07,46;UBERON:0001474,1.76e-07,22;UBERON:0004765,1.76e-07,22;UBERON:0001434,1.76e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.40788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.999329285446988,1.01237633694913,0.699561878128147,3.47008381894061,6.7186072466812,7.63901373236454,0.0850432901510698,0,0,1.59992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.88406825470758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Gm8369 | |||
}} |
Revision as of 17:03, 13 September 2013
Short description: | p3@Gm8369 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm8369_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -129bp_to_ENSMUST00000079855, NM_001164202, uc012bix.1_5end |
EntrezGene: | Gm8369 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.29e-26 | 6 |
megakaryocyte | 2.29e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 9.45e-18 | 9 |
hematopoietic lineage restricted progenitor cell | 4.21e-14 | 25 |
myeloid lineage restricted progenitor cell | 2.01e-12 | 13 |
lymphocyte of B lineage | 1.83e-11 | 1 |
B cell | 1.83e-11 | 1 |
pro-B cell | 1.83e-11 | 1 |
hematopoietic cell | 5.14e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.14e-11 | 32 |
hematopoietic stem cell | 5.14e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.14e-11 | 32 |
myeloid cell | 3.63e-10 | 16 |
common myeloid progenitor | 1.29e-08 | 19 |
connective tissue cell | 1.23e-07 | 46 |
mesenchymal cell | 1.23e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.73e-14 | 3 |
lymph node | 3.65e-11 | 1 |
axillary lymph node | 3.65e-11 | 1 |
peripheral lymph node | 3.65e-11 | 1 |
shoulder | 3.65e-11 | 1 |
bone marrow | 3.63e-10 | 16 |
hemolymphoid system | 8.55e-10 | 48 |
immune system | 8.55e-10 | 48 |
connective tissue | 1.23e-07 | 46 |
bone element | 1.76e-07 | 22 |
skeletal element | 1.76e-07 | 22 |
skeletal system | 1.76e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.