FFCP PHASE1:Hg19::chr6:134210625..134210636,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6943|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11632|TSSclassifier=S|UniProt=O43680|association_with_transcript=89bp_to_BT019660,CR450293_5end|description=CAGE_peak_6_at_TCF21_5end|id=chr6:134210625..134210636,+|ontology_enrichment_celltype=CL:0002615!3.73e-13!3;CL:0002504!8.96e-13!3;CL:1000279!8.96e-13!3;CL:1000280!8.96e-13!3;CL:0000192!4.81e-11!42;CL:0000514!4.81e-11!42;CL:0000187!1.49e-09!54;CL:0000680!6.68e-09!57;CL:0000056!6.68e-09!57;CL:0000355!6.68e-09!57;CL:1000487!8.19e-09!2;CL:0000183!1.66e-08!59;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60|ontology_enrichment_celltype_v019=CL:0002504;3.11e-27;3!CL:1000279;3.11e-27;3!CL:0002615;3.11e-27;3!CL:1000280;3.11e-27;3!CL:0002599;4.66e-21;1!CL:1000487;3.18e-11;2!CL:0000192;2.98e-08;43!CL:0000136;4.95e-07;13!CL:0000187;6.94e-07;55|ontology_enrichment_celltype_v019_2=CL:0002615,3.56e-27,3;CL:0002504,4.07e-27,3;CL:1000279,4.07e-27,3;CL:1000280,4.07e-27,3;CL:0002599,2.30e-21,1;CL:0000192,1.22e-11,43;CL:0000514,1.22e-11,43;CL:1000487,3.70e-11,2;CL:0000187,4.00e-09,55;CL:0000680,1.18e-08,58;CL:0000056,1.18e-08,58;CL:0000355,1.18e-08,58;CL:0000393,3.11e-08,61;CL:0000211,3.11e-08,61|ontology_enrichment_development_v019=CL:0000514;2.98e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.82e-11;2|ontology_enrichment_disease_v019_2=DOID:3307,1.82e-11,2|ontology_enrichment_uberon=UBERON:0003688!4.58e-17!6;UBERON:0002358!4.58e-17!6;UBERON:0003684!4.58e-17!6;UBERON:0001178!4.58e-17!6;UBERON:0004457!1.86e-15!12;UBERON:0000042!1.86e-15!12;UBERON:0002100!1.06e-13!216;UBERON:0001135!3.47e-12!15;UBERON:0003937!5.69e-11!12;UBERON:0005399!5.69e-11!12;UBERON:0002417!2.72e-09!61;UBERON:0000916!2.72e-09!61;UBERON:0009569!8.20e-09!113;UBERON:0005256!9.15e-09!143;UBERON:0002367!1.69e-08!11;UBERON:0010147!1.69e-08!11;UBERON:0009846!1.69e-08!11;UBERON:0003353!1.69e-08!11;UBERON:0004902!1.69e-08!11;UBERON:0003820!1.69e-08!11;UBERON:0009847!1.69e-08!11;UBERON:0001134!3.90e-08!61;UBERON:0002036!3.90e-08!61;UBERON:0003082!3.90e-08!61;UBERON:0002385!8.64e-08!63;UBERON:0001015!8.64e-08!63;UBERON:0000383!8.64e-08!63;UBERON:0003104!2.33e-07!238;UBERON:0009142!2.33e-07!238;UBERON:0000914!3.08e-07!83;UBERON:0002329!3.08e-07!83;UBERON:0003077!3.08e-07!83;UBERON:0003059!3.08e-07!83;UBERON:0007282!3.08e-07!83;UBERON:0009618!3.08e-07!83;UBERON:0007285!3.08e-07!83;UBERON:0000475!3.59e-07!365;UBERON:0004290!9.67e-07!70|ontology_enrichment_uberon_v019=UBERON:0003688;3.71e-14;6!UBERON:0002358;3.71e-14;6!UBERON:0003684;3.71e-14;6!UBERON:0001178;3.71e-14;6!UBERON:0001135;1.61e-12;15!UBERON:0001155;9.23e-10;9!UBERON:0004457;9.23e-10;9!UBERON:0000042;9.23e-10;9!UBERON:0000059;3.76e-08;11!UBERON:0001043;6.56e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.97e-14,6;UBERON:0002358,3.97e-14,6;UBERON:0003684,3.97e-14,6;UBERON:0001178,3.97e-14,6;UBERON:0001135,1.65e-12,15;UBERON:0001155,1.01e-09,9;UBERON:0000059,4.04e-08,11;UBERON:0001134,4.21e-08,62;UBERON:0002036,4.21e-08,62;UBERON:0003082,4.21e-08,62;UBERON:0001043,5.18e-08,3;UBERON:0009143,5.18e-08,3;UBERON:0002385,7.52e-08,64;UBERON:0001015,7.52e-08,64;UBERON:0000383,7.52e-08,64;UBERON:0004457,1.57e-07,12;UBERON:0000042,1.57e-07,12;UBERON:0002329,4.43e-07,71;UBERON:0003059,4.43e-07,71;UBERON:0007282,4.43e-07,71;UBERON:0004290,4.43e-07,71;UBERON:0009618,4.43e-07,71;UBERON:0003077,5.55e-07,72;UBERON:0007285,5.55e-07,72;UBERON:0007524,6.91e-07,73|phase1_expression=0,0,1.40954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.490385709340376,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,1.2591072030832,1.09814811894422,0.235624804691373,0,0,0,1.95053495635836,0,0,0.136499911407986,1.1312434556297,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11632 | |||
|TSSclassifier=S | |||
|UniProt=O43680 | |||
|association_with_transcript=89bp_to_BT019660,CR450293_5end | |||
|description=CAGE_peak_6_at_TCF21_5end | |||
|id=chr6:134210625..134210636,+ | |||
|ontology_enrichment_celltype=CL:0002615!3.73e-13!3;CL:0002504!8.96e-13!3;CL:1000279!8.96e-13!3;CL:1000280!8.96e-13!3;CL:0000192!4.81e-11!42;CL:0000514!4.81e-11!42;CL:0000187!1.49e-09!54;CL:0000680!6.68e-09!57;CL:0000056!6.68e-09!57;CL:0000355!6.68e-09!57;CL:1000487!8.19e-09!2;CL:0000183!1.66e-08!59;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002504;3.11e-27;3!CL:1000279;3.11e-27;3!CL:0002615;3.11e-27;3!CL:1000280;3.11e-27;3!CL:0002599;4.66e-21;1!CL:1000487;3.18e-11;2!CL:0000192;2.98e-08;43!CL:0000136;4.95e-07;13!CL:0000187;6.94e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.56e-27,3;CL:0002504,4.07e-27,3;CL:1000279,4.07e-27,3;CL:1000280,4.07e-27,3;CL:0002599,2.30e-21,1;CL:0000192,1.22e-11,43;CL:0000514,1.22e-11,43;CL:1000487,3.70e-11,2;CL:0000187,4.00e-09,55;CL:0000680,1.18e-08,58;CL:0000056,1.18e-08,58;CL:0000355,1.18e-08,58;CL:0000393,3.11e-08,61;CL:0000211,3.11e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.58e-17!6;UBERON:0002358!4.58e-17!6;UBERON:0003684!4.58e-17!6;UBERON:0001178!4.58e-17!6;UBERON:0004457!1.86e-15!12;UBERON:0000042!1.86e-15!12;UBERON:0002100!1.06e-13!216;UBERON:0001135!3.47e-12!15;UBERON:0003937!5.69e-11!12;UBERON:0005399!5.69e-11!12;UBERON:0002417!2.72e-09!61;UBERON:0000916!2.72e-09!61;UBERON:0009569!8.20e-09!113;UBERON:0005256!9.15e-09!143;UBERON:0002367!1.69e-08!11;UBERON:0010147!1.69e-08!11;UBERON:0009846!1.69e-08!11;UBERON:0003353!1.69e-08!11;UBERON:0004902!1.69e-08!11;UBERON:0003820!1.69e-08!11;UBERON:0009847!1.69e-08!11;UBERON:0001134!3.90e-08!61;UBERON:0002036!3.90e-08!61;UBERON:0003082!3.90e-08!61;UBERON:0002385!8.64e-08!63;UBERON:0001015!8.64e-08!63;UBERON:0000383!8.64e-08!63;UBERON:0003104!2.33e-07!238;UBERON:0009142!2.33e-07!238;UBERON:0000914!3.08e-07!83;UBERON:0002329!3.08e-07!83;UBERON:0003077!3.08e-07!83;UBERON:0003059!3.08e-07!83;UBERON:0007282!3.08e-07!83;UBERON:0009618!3.08e-07!83;UBERON:0007285!3.08e-07!83;UBERON:0000475!3.59e-07!365;UBERON:0004290!9.67e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.71e-14;6!UBERON:0002358;3.71e-14;6!UBERON:0003684;3.71e-14;6!UBERON:0001178;3.71e-14;6!UBERON:0001135;1.61e-12;15!UBERON:0001155;9.23e-10;9!UBERON:0004457;9.23e-10;9!UBERON:0000042;9.23e-10;9!UBERON:0000059;3.76e-08;11!UBERON:0001043;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.97e-14,6;UBERON:0002358,3.97e-14,6;UBERON:0003684,3.97e-14,6;UBERON:0001178,3.97e-14,6;UBERON:0001135,1.65e-12,15;UBERON:0001155,1.01e-09,9;UBERON:0000059,4.04e-08,11;UBERON:0001134,4.21e-08,62;UBERON:0002036,4.21e-08,62;UBERON:0003082,4.21e-08,62;UBERON:0001043,5.18e-08,3;UBERON:0009143,5.18e-08,3;UBERON:0002385,7.52e-08,64;UBERON:0001015,7.52e-08,64;UBERON:0000383,7.52e-08,64;UBERON:0004457,1.57e-07,12;UBERON:0000042,1.57e-07,12;UBERON:0002329,4.43e-07,71;UBERON:0003059,4.43e-07,71;UBERON:0007282,4.43e-07,71;UBERON:0004290,4.43e-07,71;UBERON:0009618,4.43e-07,71;UBERON:0003077,5.55e-07,72;UBERON:0007285,5.55e-07,72;UBERON:0007524,6.91e-07,73 | |||
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|short_description=p6@TCF21 | |||
}} |
Revision as of 18:04, 13 September 2013
Short description: | p6@TCF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TCF21_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_BT019660, CR450293_5end |
EntrezGene: | TCF21 |
HGNC: | 11632 |
UniProt: | O43680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.56e-27 | 3 |
enteric smooth muscle cell | 4.07e-27 | 3 |
smooth muscle cell of large intestine | 4.07e-27 | 3 |
smooth muscle cell of colon | 4.07e-27 | 3 |
smooth muscle cell of the esophagus | 2.30e-21 | 1 |
smooth muscle cell | 1.22e-11 | 43 |
smooth muscle myoblast | 1.22e-11 | 43 |
smooth muscle cell of prostate | 3.70e-11 | 2 |
muscle cell | 4.00e-09 | 55 |
muscle precursor cell | 1.18e-08 | 58 |
myoblast | 1.18e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-08 | 58 |
electrically responsive cell | 3.11e-08 | 61 |
electrically active cell | 3.11e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.97e-14 | 6 |
peritoneum | 3.97e-14 | 6 |
abdominal cavity | 3.97e-14 | 6 |
visceral peritoneum | 3.97e-14 | 6 |
smooth muscle tissue | 1.65e-12 | 15 |
colon | 1.01e-09 | 9 |
large intestine | 4.04e-08 | 11 |
skeletal muscle tissue | 4.21e-08 | 62 |
striated muscle tissue | 4.21e-08 | 62 |
myotome | 4.21e-08 | 62 |
esophagus | 5.18e-08 | 3 |
esophageal region | 5.18e-08 | 3 |
muscle tissue | 7.52e-08 | 64 |
musculature | 7.52e-08 | 64 |
musculature of body | 7.52e-08 | 64 |
cavity lining | 1.57e-07 | 12 |
serous membrane | 1.57e-07 | 12 |
somite | 4.43e-07 | 71 |
presomitic mesoderm | 4.43e-07 | 71 |
presumptive segmental plate | 4.43e-07 | 71 |
dermomyotome | 4.43e-07 | 71 |
trunk paraxial mesoderm | 4.43e-07 | 71 |
paraxial mesoderm | 5.55e-07 | 72 |
presumptive paraxial mesoderm | 5.55e-07 | 72 |
dense mesenchyme tissue | 6.91e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.82e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.