FFCP PHASE1:Mm9::chr1:107054430..107054437,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:107054430..107054437,-|id=chr1:107054430..107054437,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-10,6;CL:0000677,1.07e-10,6;CL:0000584,1.07e-10,6;CL:0000075,2.61e-09,7;CL:0002563,1.89e-07,9;CL:0002251,1.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.97e-16!43;UBERON:0001242!1.13e-14!13;UBERON:0000060!1.13e-14!13;UBERON:0001262!1.13e-14!13;UBERON:0004786!1.13e-14!13;UBERON:0005409!2.85e-14!59;UBERON:0000344!1.01e-12!15;UBERON:0000331!4.61e-11!3;UBERON:0002116!4.61e-11!3;UBERON:0001204!4.61e-11!3;UBERON:0001168!4.61e-11!3;UBERON:0004923!6.11e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.00e-28,13;UBERON:0001262,2.00e-28,13;UBERON:0004786,2.00e-28,13;UBERON:0000344,1.01e-24,15;UBERON:0000331,2.49e-20,3;UBERON:0002116,2.49e-20,3;UBERON:0001204,2.49e-20,3;UBERON:0001168,2.49e-20,3;UBERON:0000160,2.78e-17,31;UBERON:0004923,1.15e-15,24;UBERON:0002108,1.58e-15,4;UBERON:0005409,1.50e-11,47;UBERON:0001155,2.13e-08,2;UBERON:0000059,2.13e-08,2;UBERON:0003350,1.89e-07,9;UBERON:0004808,1.89e-07,9;UBERON:0001277,1.89e-07,9|phase1_expression=0,0,0,3.32710632437513,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66032787238923,1.76421090831952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:107054430..107054437,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:107054430..107054437,- | |||
|id=chr1:107054430..107054437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-10,6;CL:0000677,1.07e-10,6;CL:0000584,1.07e-10,6;CL:0000075,2.61e-09,7;CL:0002563,1.89e-07,9;CL:0002251,1.89e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.97e-16!43;UBERON:0001242!1.13e-14!13;UBERON:0000060!1.13e-14!13;UBERON:0001262!1.13e-14!13;UBERON:0004786!1.13e-14!13;UBERON:0005409!2.85e-14!59;UBERON:0000344!1.01e-12!15;UBERON:0000331!4.61e-11!3;UBERON:0002116!4.61e-11!3;UBERON:0001204!4.61e-11!3;UBERON:0001168!4.61e-11!3;UBERON:0004923!6.11e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.00e-28,13;UBERON:0001262,2.00e-28,13;UBERON:0004786,2.00e-28,13;UBERON:0000344,1.01e-24,15;UBERON:0000331,2.49e-20,3;UBERON:0002116,2.49e-20,3;UBERON:0001204,2.49e-20,3;UBERON:0001168,2.49e-20,3;UBERON:0000160,2.78e-17,31;UBERON:0004923,1.15e-15,24;UBERON:0002108,1.58e-15,4;UBERON:0005409,1.50e-11,47;UBERON:0001155,2.13e-08,2;UBERON:0000059,2.13e-08,2;UBERON:0003350,1.89e-07,9;UBERON:0004808,1.89e-07,9;UBERON:0001277,1.89e-07,9 | |||
|phase1_expression=0,0,0,3.32710632437513,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66032787238923,1.76421090831952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:107054430..107054437,- | |||
}} |
Revision as of 18:31, 13 September 2013
Short description: | p@chr1:107054430..107054437, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:107054430..107054437, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.07e-10 | 6 |
gut absorptive cell | 1.07e-10 | 6 |
enterocyte | 1.07e-10 | 6 |
columnar/cuboidal epithelial cell | 2.61e-09 | 7 |
intestinal epithelial cell | 1.89e-07 | 9 |
epithelial cell of alimentary canal | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.00e-28 | 13 |
wall of intestine | 2.00e-28 | 13 |
gastrointestinal system mucosa | 2.00e-28 | 13 |
mucosa | 1.01e-24 | 15 |
ileal mucosa | 2.49e-20 | 3 |
ileum | 2.49e-20 | 3 |
mucosa of small intestine | 2.49e-20 | 3 |
wall of small intestine | 2.49e-20 | 3 |
intestine | 2.78e-17 | 31 |
organ component layer | 1.15e-15 | 24 |
small intestine | 1.58e-15 | 4 |
gastrointestinal system | 1.50e-11 | 47 |
colon | 2.13e-08 | 2 |
large intestine | 2.13e-08 | 2 |
epithelium of mucosa | 1.89e-07 | 9 |
gastrointestinal system epithelium | 1.89e-07 | 9 |
intestinal epithelium | 1.89e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.