FFCP PHASE1:Mm9::chr1:164816600..164816622,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=55990|HGNC=|MCL_coexpression_id=126|UniProt=Q8K2I3|association_with_transcript=23bp_to_uc007dgz.1_5end|description=CAGE_peak_7_at_Fmo2_5end|id=chr1:164816600..164816622,-|ontology_enrichment_celltype=CL:0000239!1.97e-14!6;CL:0000677!1.97e-14!6;CL:0000212!1.97e-14!6;CL:0000584!1.97e-14!6;CL:0000075!2.98e-12!7;CL:0002563!2.41e-09!9;CL:0002251!2.41e-09!9;CL:0000473!3.48e-08!3;CL:0000627!3.48e-08!3;CL:0000682!3.48e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-30,6;CL:0000677,2.65e-30,6;CL:0000584,2.65e-30,6;CL:0000075,6.09e-26,7;CL:0002563,4.05e-20,9;CL:0002251,4.05e-20,9;CL:0000682,2.46e-16,3;CL:0000066,1.30e-15,25;CL:0002076,6.13e-12,15;CL:0000223,7.40e-09,20;CL:0000473,2.67e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.86e-21!15;UBERON:0001242!2.66e-17!13;UBERON:0000060!2.66e-17!13;UBERON:0001262!2.66e-17!13;UBERON:0004786!2.66e-17!13;UBERON:0004923!3.22e-12!24;UBERON:0000160!7.00e-12!43;UBERON:0003350!2.41e-09!9;UBERON:0004808!2.41e-09!9;UBERON:0001277!2.41e-09!9;UBERON:0005409!1.33e-08!59;UBERON:0000331!1.72e-08!3;UBERON:0002116!1.72e-08!3;UBERON:0001204!1.72e-08!3;UBERON:0001168!1.72e-08!3;UBERON:0000485!1.71e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.43e-33,15;UBERON:0001242,1.92e-31,13;UBERON:0001262,1.92e-31,13;UBERON:0004786,1.92e-31,13;UBERON:0004923,2.20e-20,24;UBERON:0003350,4.05e-20,9;UBERON:0004808,4.05e-20,9;UBERON:0001277,4.05e-20,9;UBERON:0000331,5.10e-17,3;UBERON:0002116,5.10e-17,3;UBERON:0001204,5.10e-17,3;UBERON:0001168,5.10e-17,3;UBERON:0000485,2.09e-16,11;UBERON:0000160,1.78e-15,31;UBERON:0002108,6.60e-13,4;UBERON:0005409,9.42e-10,47|phase1_expression=0,9.07336059862339,5.45999087267443,6.65421264875026,8.5152274090879,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,2.55987876469451,0.91763712426868,9.18771142584032,5.59990595006797,6.46413698057667,33.8241686632346,35.2842181663903,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7973312910672,0,0,0,0,0,0,0,0,0,0,18.954524033364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0.795825888164603,0,0.898819408654221,0,0.398282546508734,0,0,0,0.203651327845314,0,0.49095073923223,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Fmo2}} | ||
|EntrezGene=55990 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=Q8K2I3 | |||
|association_with_transcript=23bp_to_uc007dgz.1_5end | |||
|description=CAGE_peak_7_at_Fmo2_5end | |||
|id=chr1:164816600..164816622,- | |||
|ontology_enrichment_celltype=CL:0000239!1.97e-14!6;CL:0000677!1.97e-14!6;CL:0000212!1.97e-14!6;CL:0000584!1.97e-14!6;CL:0000075!2.98e-12!7;CL:0002563!2.41e-09!9;CL:0002251!2.41e-09!9;CL:0000473!3.48e-08!3;CL:0000627!3.48e-08!3;CL:0000682!3.48e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-30,6;CL:0000677,2.65e-30,6;CL:0000584,2.65e-30,6;CL:0000075,6.09e-26,7;CL:0002563,4.05e-20,9;CL:0002251,4.05e-20,9;CL:0000682,2.46e-16,3;CL:0000066,1.30e-15,25;CL:0002076,6.13e-12,15;CL:0000223,7.40e-09,20;CL:0000473,2.67e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.86e-21!15;UBERON:0001242!2.66e-17!13;UBERON:0000060!2.66e-17!13;UBERON:0001262!2.66e-17!13;UBERON:0004786!2.66e-17!13;UBERON:0004923!3.22e-12!24;UBERON:0000160!7.00e-12!43;UBERON:0003350!2.41e-09!9;UBERON:0004808!2.41e-09!9;UBERON:0001277!2.41e-09!9;UBERON:0005409!1.33e-08!59;UBERON:0000331!1.72e-08!3;UBERON:0002116!1.72e-08!3;UBERON:0001204!1.72e-08!3;UBERON:0001168!1.72e-08!3;UBERON:0000485!1.71e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.43e-33,15;UBERON:0001242,1.92e-31,13;UBERON:0001262,1.92e-31,13;UBERON:0004786,1.92e-31,13;UBERON:0004923,2.20e-20,24;UBERON:0003350,4.05e-20,9;UBERON:0004808,4.05e-20,9;UBERON:0001277,4.05e-20,9;UBERON:0000331,5.10e-17,3;UBERON:0002116,5.10e-17,3;UBERON:0001204,5.10e-17,3;UBERON:0001168,5.10e-17,3;UBERON:0000485,2.09e-16,11;UBERON:0000160,1.78e-15,31;UBERON:0002108,6.60e-13,4;UBERON:0005409,9.42e-10,47 | |||
|phase1_expression=0,9.07336059862339,5.45999087267443,6.65421264875026,8.5152274090879,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,2.55987876469451,0.91763712426868,9.18771142584032,5.59990595006797,6.46413698057667,33.8241686632346,35.2842181663903,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7973312910672,0,0,0,0,0,0,0,0,0,0,18.954524033364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0.795825888164603,0,0.898819408654221,0,0.398282546508734,0,0,0,0.203651327845314,0,0.49095073923223,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Fmo2 | |||
}} |
Revision as of 19:28, 13 September 2013
Short description: | p7@Fmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 23bp_to_uc007dgz.1_5end |
EntrezGene: | Fmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.65e-30 | 6 |
gut absorptive cell | 2.65e-30 | 6 |
enterocyte | 2.65e-30 | 6 |
columnar/cuboidal epithelial cell | 6.09e-26 | 7 |
intestinal epithelial cell | 4.05e-20 | 9 |
epithelial cell of alimentary canal | 4.05e-20 | 9 |
M cell of gut | 2.46e-16 | 3 |
epithelial cell | 1.30e-15 | 25 |
endo-epithelial cell | 6.13e-12 | 15 |
endodermal cell | 7.40e-09 | 20 |
defensive cell | 2.67e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.43e-33 | 15 |
intestinal mucosa | 1.92e-31 | 13 |
wall of intestine | 1.92e-31 | 13 |
gastrointestinal system mucosa | 1.92e-31 | 13 |
organ component layer | 2.20e-20 | 24 |
epithelium of mucosa | 4.05e-20 | 9 |
gastrointestinal system epithelium | 4.05e-20 | 9 |
intestinal epithelium | 4.05e-20 | 9 |
ileal mucosa | 5.10e-17 | 3 |
ileum | 5.10e-17 | 3 |
mucosa of small intestine | 5.10e-17 | 3 |
wall of small intestine | 5.10e-17 | 3 |
simple columnar epithelium | 2.09e-16 | 11 |
intestine | 1.78e-15 | 31 |
small intestine | 6.60e-13 | 4 |
gastrointestinal system | 9.42e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.